List of works by Adriana Ribeiro Carneiro Nunes

A Proteomic Perspective on the Bacterial Adaptation to Cold: Integrating OMICs Data of the Psychrotrophic Bacterium Exiguobacterium antarcticum B7.

scientific article

Bothrops jararaca venom (BjV) induces differential leukocyte accumulation in mice genetically selected for acute inflammatory reaction: the role of host genetic background on expression of adhesion molecules and release of endogenous mediators

scientific article published on 06 August 2008

Campylobacter fetus subspecies: comparative genomics and prediction of potential virulence targets.

scientific article published on 6 August 2012

Co-Expression Networks for Causal Gene Identification Based on RNA-Seq Data of Corynebacterium pseudotuberculosis

scientific article published on 14 July 2020

Complete Genome Sequence of Corynebacterium pseudotuberculosis Strain E19, Isolated from a Horse in Chile

scientific article

Complete genome sequence of Corynebacterium pseudotuberculosis Cp31, isolated from an Egyptian buffalo

scientific article

Complete genome sequence of Corynebacterium pseudotuberculosis I19, a strain isolated from a cow in Israel with bovine mastitis

scientific article

Complete genome sequence of Corynebacterium pseudotuberculosis biovar ovis strain P54B96 isolated from antelope in South Africa obtained by rapid next generation sequencing technology

scientific article published on 15 December 2012

Complete genome sequence of Corynebacterium pseudotuberculosis strain 1/06-A, isolated from a horse in North America.

scientific article

Complete genome sequence of Corynebacterium pseudotuberculosis strain CIP 52.97, isolated from a horse in Kenya

scientific article published on December 2011

Complete genome sequence of Corynebacterium pseudotuberculosis strain Cp267, isolated from a llama

scientific article

Complete genome sequence of Streptococcus agalactiae strain SA20-06, a fish pathogen associated to meningoencephalitis outbreaks.

scientific article published on 25 May 2013

Complete genome sequence of type strain Campylobacter fetus subsp. venerealis NCTC 10354T.

scientific article

Complete genome sequences of Corynebacterium pseudotuberculosis strains 3/99-5 and 42/02-A, isolated from sheep in Scotland and Australia, respectively.

scientific article

Corynebacterium pseudotuberculosis RNA-seq data from abiotic stresses.

scientific article

Draft Genome Sequence of Serratia fonticola LMG 7882T Isolated from Freshwater

scientific article published on 26 December 2013

Draft Genome Sequence of Serratia fonticola UTAD54, a Carbapenem-Resistant Strain Isolated from Drinking Water

scientific article

Draft Genome Sequences of Two Pathogenic Corynebacterial Species Isolated from Cows

scientific article published on 2 March 2016

Erratum for Alves et al., Complete Genome Sequence of Corynebacterium pseudotuberculosis Strain PA01, Isolated from Sheep in Pará, Brazil.

scientific article published on 17 March 2016

Exoproteome and secretome derived broad spectrum novel drug and vaccine candidates in Vibrio cholerae targeted by Piper betel derived compounds

scientific article

Extended Spectrum Beta-Lactamase-Producing Gram-Negative Bacteria Recovered From an Amazonian Lake Near the City of Belém, Brazil

article

FunSys: Software for functional analysis of prokaryotic transcriptome and proteome

scientific article published on 16 June 2012

Functional annotation of hypothetical proteins from the Exiguobacterium antarcticum strain B7 reveals proteins involved in adaptation to extreme environments, including high arsenic resistance.

scientific article

Genome Sequence of Corynebacterium ulcerans Strain FRC11.

scientific article

Genome Sequence of Lactococcus lactis subsp. lactis NCDO 2118, a GABA-Producing Strain

scientific article

Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production

scientific article published on 29 November 2012

Genome sequence of Exiguobacterium antarcticum B7, isolated from a biofilm in Ginger Lake, King George Island, Antarctica

scientific article (publication date: December 2012)

Genome sequence of the Corynebacterium pseudotuberculosis Cp316 strain, isolated from the abscess of a Californian horse

scientific article

Genomic Architecture of the Two Cold-Adapted Genera Exiguobacterium and Psychrobacter: Evidence of Functional Reduction in the Exiguobacterium antarcticum B7 genome

scientific article published on 8 February 2018

Genomic analysis of four strains of Corynebacterium pseudotuberculosis bv. Equi isolated from horses showing distinct signs of infection

scientific article published on 31 January 2017

Graphical contig analyzer for all sequencing platforms (G4ALL): a new stand-alone tool for finishing and draft generation of bacterial genomes.

scientific article published on 29 June 2013

High efficiency application of a mate-paired library from next-generation sequencing to postlight sequencing: Corynebacterium pseudotuberculosis as a case study for microbial de novo genome assembly.

scientific article

In silico functional prediction of hypothetical proteins from the core genome of Corynebacterium pseudotuberculosis biovar ovis

scientific article published on 26 August 2020

Ion Torrent-based transcriptional assessment of a Corynebacterium pseudotuberculosis equi strain reveals denaturing high-performance liquid chromatography a promising rRNA depletion method.

scientific article published on 15 January 2013

Local inflammatory reaction induced by Bothrops jararaca venom differs in mice selected for acute inflammatory response.

scientific article published in November 2002

Omics profiles used to evaluate the gene expression of Exiguobacterium antarcticum B7 during cold adaptation.

scientific article

Prediction of new vaccine targets in the core genome of Corynebacterium pseudotuberculosis through omics approaches and reverse vaccinology

scientific article published on 27 March 2019

Progression of 'OMICS' methodologies for understanding the pathogenicity of Corynebacterium pseudotuberculosis: the Brazilian experience

scientific article

Quadruplex PCR assay for identification of Corynebacterium pseudotuberculosis differentiating biovar Ovis and Equi

scientific article published on 25 September 2017

Quality of prokaryote genome assembly: Indispensable issues of factors affecting prokaryote genome assembly quality

article

Rapid hybrid de novo assembly of a microbial genome using only short reads: Corynebacterium pseudotuberculosis I19 as a case study

article

Resistome in Lake Bolonha, Brazilian Amazon: Identification of Genes Related to Resistance to Broad-Spectrum Antibiotics

scientific article published on 04 February 2020

Simplifier: a web tool to eliminate redundant NGS contigs

scientific article

The Corynebacterium pseudotuberculosis in silico predicted pan-exoproteome

scientific article

The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains

scientific article

Tips and tricks for the assembly of a Corynebacterium pseudotuberculosis genome using a semiconductor sequencer

scientific article published on 02 December 2012

Value of a newly sequenced bacterial genome

scientific article

Whole Genome Annotation: In Silico Analysis

Whole-Genome Sequence of Corynebacterium pseudotuberculosis PA04, Isolated from the Lymph Node of a Sheep in the Amazon, Brazil

scientific article

Whole-Genome Sequence of Corynebacterium pseudotuberculosis Strain 226, Isolated from the Abscess of a Goat in California

scientific article published on 25 February 2016

Whole-genome sequence of Corynebacterium pseudotuberculosis PAT10 strain isolated from sheep in Patagonia, Argentina

scientific article published on November 2011

Whole-genome sequence of Corynebacterium pseudotuberculosis strain Cp162, isolated from camel.

scientific article published on October 2012

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