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List of works by Young-Do Nam

Age-related compositional and functional changes in micro-pig gut microbiome

scientific article published on 28 October 2019

Aliihoeflea aestuarii gen. nov., sp. nov., a novel bacterium isolated from tidal flat sediment

scientific article

Alishewanella aestuarii sp. nov., isolated from tidal flat sediment, and emended description of the genus Alishewanella

scientific article

Alishewanella jeotgali sp. nov., isolated from traditional fermented food, and emended description of the genus Alishewanella.

scientific article published on 20 July 2009

Amplification of uncultured single-stranded DNA viruses from rice paddy soil

scientific article

Analysis of yeast and archaeal population dynamics in kimchi using denaturing gradient gel electrophoresis.

scientific article published on 21 May 2008

Antidiabetic Effect of Morinda citrifolia (Noni) Fermented by Cheonggukjang in KK-A(y) Diabetic Mice.

scientific article

Application of quantitative real-time PCR for enumeration of total bacterial, archaeal, and yeast populations in kimchi

scientific article published in December 2009

Arthrobacter soli sp. nov., a novel bacterium isolated from wastewater reservoir sediment.

scientific article

Arthrobacter subterraneus sp. nov., isolated from deep subsurface water of the South Coast of Korea

scientific article

Bacterial community analysis in three types of the fermented seafood, jeotgal, produced in South Korea

scientific article published on 09 May 2018

Bacterial, archaeal, and eukaryal diversity in the intestines of Korean people

scientific article

Bacteroides faecium sp. nov. isolated from human faeces ⬇️

scientific article published on 10 January 2023

Bizionia psychrotolerans sp. nov., a psychrophilic bacterium isolated from the intestine of a sea cucumber (Apostichopus japonicus).

scientific article

Brachybacterium squillarum sp. nov., isolated from salt-fermented seafood

scientific article

Carnobacterium jeotgali sp. nov., isolated from a Korean traditional fermented food

scientific article published on 30 July 2009

Characterization of antimicrobial lipopeptides produced by Bacillus sp. LM7 isolated from chungkookjang, a Korean traditional fermented soybean food.

scientific article published on 23 December 2015

Characterization of mannanase from Bacillus sp., a novel Codium fragile cell wall-degrading bacterium

scientific article published on 21 September 2017

Characterization of the depth-related changes in the microbial communities in Lake Hovsgol sediment by 16S rRNA gene-based approaches

scientific article

Comparative analysis of Korean human gut microbiota by barcoded pyrosequencing

scientific article

Comparative evaluation of spoilage-related bacterial diversity and metabolite profiles in chilled beef stored under air and vacuum packaging

scientific article published on 06 September 2018

Comparing microarrays and next-generation sequencing technologies for microbial ecology research.

scientific article published on 08 April 2010

Comparison of DNA extraction methods for human gut microbial community profiling

scientific article published on 21 December 2017

Complete Genome Sequence and Genomic Characterization of Lactobacillus acidophilus LA1 (11869BP).

scientific article published on 8 February 2018

Complete Genome Sequence of Halalkalicoccus jeotgali B3T, an Extremely Halophilic Archaeon

scientific article

Complete Genome Sequence of Lactobacillus casei LC5, a Potential Probiotics for Atopic Dermatitis

scientific article published on 7 April 2017

Complete genome sequence of Bifidobacterium choerinum FMB-1, a resistant starch-degrading bacterium

scientific article published on 20 March 2018

Complete genome sequence of Clostridium perfringens CBA7123 isolated from a faecal sample from Korea

scientific article

Complete genome sequence of a commensal bacterium, Hafnia alvei CBA7124, isolated from human feces

scientific article

Complete genome sequence of acetate-producing Klebsiella pneumoniae L5-2 isolated from infant feces

scientific article published on 15 February 2019

Corynebacterium nuruki sp. nov., isolated from an alcohol fermentation starter.

scientific article

Development and evaluation of genome-probing microarrays for monitoring lactic acid bacteria.

scientific article

Development of microbial genome-probing microarrays using digital multiple displacement amplification of uncultivated microbial single cells.

scientific article published in August 2008

Diagnostic and prognostic potential of the oral and gut microbiome for lung adenocarcinoma

scientific article published in 2021

Diet Control More Intensively Disturbs Gut Microbiota Than Genetic Background in Wild Type and ob/ob Mice.

scientific article

Dietzia alimentaria sp. nov., isolated from a traditional Korean food.

scientific article

Draft genome sequence of Gillisia sp. strain CBA3202, a novel member of the genus Gillisia, which belongs to the family Flavobacteriaceae

scientific article published on July 2012

Draft genome sequence of Halapricum salinum CBA1105(T), an extremely halophilic archaeon isolated from solar salt.

scientific article published in October 2014

Draft genome sequence of Halolamina rubra CBA1107(T), an agarolytic haloarchaeon isolated from solar salt

scientific article published on 12 September 2014

Draft genome sequence of Halorubrum halophilum B8(T), an extremely halophilic archaeon isolated from salt-fermented seafood.

scientific article published on 30 August 2014

Draft genome sequence of Staphylococcus vitulinus F1028, a strain isolated from a block of fermented soybean

scientific article published on November 2012

Draft genome sequence of a denitrifying bacterium Paracoccus marcusii PAMC 22219 isolated from Arctic marine sediment

scientific article published on 28 January 2015

Draft genome sequence of the agarolytic haloarchaeon Halobellus rufus type strain CBA1103.

scientific article published on 4 December 2014

Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43(T) isolated from fermented seafood

scientific article

Draft genome sequence of the extremely halophilic archaeon Halococcus sediminicola CBA1101(T) isolated from a marine sediment sample.

scientific article published on 22 October 2014

Effect of probiotics on obesity-related markers per enterotype: a double-blind, placebo-controlled, randomized clinical trial

scientific article published on 07 February 2020

Effect of raw potato starch on the gut microbiome and metabolome in mice

scientific article published on 12 April 2019

Effects of Bentonite Bgp35b-p on the Gut Microbiota of Mice Fed a High-Fat Diet.

scientific article published on 7 February 2018

Effects of Lactobacillus pentosus in Children with Allergen-Sensitized Atopic Dermatitis

scientific article published on 11 May 2020

Effects of raw potato starch on body weight with controlled glucose delivery

scientific article published on 28 February 2018

Erratum to: Halolamina rubra sp. nov., a haloarchaeon isolated from non-purified solar salt

scientific article published on 01 August 2015

Expression and characterization of a glutamate decarboxylase from Lactobacillus brevis 877G producing γ-aminobutyric acid

scientific article published on 7 April 2013

Expression and characterization of glutamate decarboxylase from Lactobacillus brevis HYE1 isolated from kimchi

scientific article published on 02 March 2018

Ferrimonas pelagia sp. nov., isolated from seawater.

scientific article

Flavimarina flava sp. nov., isolated from Salicornia herbacea.

scientific article

Furan, phenolic, and heptelidic acid derivatives produced by Aspergillus oryzae

scientific article published on 31 October 2016

Generation of subspecies level-specific microbial diagnostic microarrays using genes amplified from subtractive suppression hybridization as microarray probes

scientific article

Genome sequence of Kocuria atrinae C3-8, isolated from Jeotgal, a traditional Korean fermented seafood.

scientific article published on November 2012

Genome sequence of Lysinibacillus boronitolerans F1182, isolated from a traditional Korean fermented soybean product.

scientific article

Genome sequence of Staphylococcus lentus F1142, a strain isolated from Korean soybean paste

scientific article

Genome sequence of a commensal bacterium, Enterococcus faecalis CBA7120, isolated from a Korean fecal sample.

scientific article

Genome sequence of the haloarchaeon Haloterrigena jeotgali type strain A29(T) isolated from salt-fermented food.

scientific article

Genomic Analysis of Bacillus licheniformis CBA7126 Isolated from a Human Fecal Sample

scientific article published on 13 October 2017

Genomic Analysis of a Pathogenic Bacterium, Paeniclostridium sordellii CBA7122 Containing the Highest Number of rRNA Operons, Isolated from a Human Stool Sample.

scientific article published on 15 November 2017

Genomic Analysis of the Extremely Halophilic Archaeon Halobacterium noricense CBA1132 Isolated from Solar Salt That Is an Essential Material for Fermented Foods.

scientific article published on 9 May 2016

Genomic and phenotypic analyses of Carnobacterium jeotgali strain MS3(T), a lactate-producing candidate biopreservative bacterium isolated from salt-fermented shrimp.

scientific article

Gillisia marina sp. nov., from seashore sand, and emended description of the genus Gillisia.

scientific article

Gracilibacillus kimchii sp. nov., a halophilic bacterium isolated from kimchi.

scientific article

Halalkalicoccus jeotgali sp. nov., a halophilic archaeon from shrimp jeotgal, a traditional Korean fermented seafood.

scientific article

Halapricum salinum gen. nov., sp. nov., an extremely halophilic archaeon isolated from non-purified solar salt.

scientific article

Halobellus rufus sp. nov., an extremely halophilic archaeon isolated from non-purified solar salt

scientific article published on 9 March 2014

Halococcus sediminicola sp. nov., an extremely halophilic archaeon isolated from a marine sediment

scientific article

Halolamina rubra sp. nov., a haloarchaeon isolated from non-purified solar salt.

scientific article published on 15 March 2014

Haloplanus rallus sp. nov., a halophilic archaeon isolated from crude solar salt

scientific article published on 21 August 2018

Halorubrum halophilum sp. nov., an extremely halophilic archaeon isolated from a salt-fermented seafood.

scientific article

Halostella salina gen. nov., sp. nov., an extremely halophilic archaeon isolated from solar salt.

scientific article

Haloterrigena jeotgali sp. nov., an extremely halophilic archaeon from salt-fermented food

scientific article published on 20 July 2009

Henriciella marina gen. nov., sp. nov., a novel member of the family Hyphomonadaceae isolated from the East Sea.

scientific article

Immune-enhancing effect of nanometric Lactobacillus plantarum nF1 (nLp-nF1) in a mouse model of cyclophosphamide-induced immunosuppression

scientific article published on 15 November 2017

Impact of pelvic radiotherapy on gut microbiota of gynecological cancer patients revealed by massive pyrosequencing

scientific article

Inhibitory effect of Bacillus velezensis on biofilm formation by Streptococcus mutans

scientific article published on 12 April 2019

Innate immune homeostasis by the homeobox gene caudal and commensal-gut mutualism in Drosophila.

scientific article

Insect gut bacterial diversity determined by environmental habitat, diet, developmental stage, and phylogeny of host

scientific article

Investigation of archaeal and bacterial diversity in fermented seafood using barcoded pyrosequencing.

scientific article published on 9 July 2009

Isolation of the putative biosynthetic gene cluster of 1-deoxynojirimycin by Bacillus amyloliquefaciens 140N, its production and application to the fermentation of soybean paste.

scientific article published on 7 February 2013

Joostella marina gen. nov., sp. nov., a novel member of the family Flavobacteriaceae isolated from the East Sea.

scientific article

Kocuria salsicia sp. nov., isolated from salt-fermented seafood

scientific article

Lentibacillus kimchii sp. nov., an extremely halophilic bacterium isolated from kimchi, a Korean fermented vegetable.

scientific article

Leucobacter celer sp. nov., isolated from Korean fermented seafood

scientific article

Leucobacter salsicius sp. nov., from a salt-fermented food

scientific article

Luteimonas aestuarii sp. nov., isolated from tidal flat sediment

scientific article

Marinobacter goseongensis sp. nov., from seawater

scientific article

Marinobacterium halophilum sp. nov., a marine bacterium isolated from the Yellow Sea.

scientific article

Marinomonas basaltis sp. nov., a marine bacterium isolated from black sand

scientific article

Metatranscriptome analysis of lactic acid bacteria during kimchi fermentation with genome-probing microarrays

scientific article published on 20 January 2009

Methylobacterium platani sp. nov., isolated from a leaf of the tree Platanus orientalis

scientific article

Microbial community analysis of Korean soybean pastes by next-generation sequencing

scientific article

Microbial composition of the Korean traditional food "kochujang" analyzed by a massive sequencing technique

scientific article

Natronococcus jeotgali sp. nov., a halophilic archaeon isolated from shrimp jeotgal, a traditional fermented seafood from Korea.

scientific article

Next-Generation Sequencing Analyses of Bacterial Community Structures in Soybean Pastes Produced in Northeast China

scientific article

Nitratireductor basaltis sp. nov., isolated from black beach sand

scientific article

Nocardioides basaltis sp. nov., isolated from black beach sand

scientific article

Nutrikinetic study of genistein metabolites in ovariectomized mice.

scientific article published on 23 October 2017

Occurrence of viable, red-pigmented haloarchaea in the plumage of captive flamingoes

scientific article

Oceanisphaera donghaensis sp. nov., a halophilic bacterium from the East Sea, Korea.

scientific article

Oceanobacillus kimchii sp. nov. isolated from a traditional Korean fermented food.

scientific article

Paenibacillus arcticus sp. nov., isolated from Arctic soil.

scientific article

Paenibacillus lutimineralis sp. nov., Isolated From Bentonite

scientific article published on 08 June 2019

Paracoccus aestuarii sp. nov., isolated from tidal flat sediment

scientific article

Pedobacter agri sp. nov., from soil.

scientific article

Phaeobacter marinintestinus sp. nov., isolated from the intestine of a sea cucumber (Apostichopus japonicus).

scientific article

Phenotypic characterization and genomic analysis of the Shigella sonnei bacteriophage SP18.

scientific article published on April 2010

Phylogenetic analysis of microalgae based on highly abundant proteins using mass spectrometry.

scientific article

Phylogenetic characterization of two novel commensal bacteria involved with innate immune homeostasis in Drosophila melanogaster.

scientific article

Probiotics in human health and disease: from nutribiotics to pharmabiotics

article

Progress of analytical tools and techniques for human gut microbiome research

scientific article published on 28 September 2018

Pseudoalteromonas marina sp. nov., a marine bacterium isolated from tidal flats of the Yellow Sea, and reclassification of Pseudoalteromonas sagamiensis as Algicola sagamiensis comb. nov.

scientific article

Pseudomonas sabulinigri sp. nov., isolated from black beach sand

scientific article

Pseudoruegeria aestuarii sp. nov., of the family Rhodobacteraceae, isolated from a tidal flat

scientific article

Quantitative real time PCR assays for the enumeration of Saccharomyces cerevisiae and the Saccharomyces sensu stricto complex in human feces

scientific article published in December 2007

Relationship between genome similarity and DNA-DNA hybridization among closely related bacteria

scientific article published in June 2007

Shewanella basaltis sp. nov., a marine bacterium isolated from black sand.

scientific article

Sphingomonas aestuarii sp. nov., isolated from tidal flat sediment.

scientific article

Statistical superiority of genome-probing microarrays as genomic DNA-DNA hybridization in revealing the bacterial phylogenetic relationship compared to conventional methods

scientific article

Sulfitobacter litoralis sp. nov., a marine bacterium isolated from the East Sea, Korea.

scientific article

The effect of resistant starch (RS) on the bovine rumen microflora and isolation of RS-degrading bacteria

scientific article published on 13 April 2018

The effects of sequencing platforms on phylogenetic resolution in 16 S rRNA gene profiling of human feces.

scientific article published on 24 April 2018

The influence of in vitro pectin fermentation on the human fecal microbiome.

scientific article

Unexpected convergence of fungal and bacterial communities during fermentation of traditional Korean alcoholic beverages inoculated with various natural starters

scientific article published on 5 October 2011

Vibrio areninigrae sp. nov., a marine bacterium isolated from black sand.

scientific article

Vibrio litoralis sp. nov., isolated from a Yellow Sea tidal flat in Korea

scientific article

Virgibacillus alimentarius sp. nov., isolated from a traditional Korean food.

scientific article

Vulcanisaeta thermophila sp. nov., a hyperthermophilic and acidophilic crenarchaeon isolated from solfataric soil.

scientific article

Weissella cibaria WIKIM28 ameliorates atopic dermatitis-like skin lesions by inducing tolerogenic dendritic cells and regulatory T cells in BALB/c mice

scientific article published on 09 January 2017

Zunongwangia flava sp. nov., belonging to the family Flavobacteriaceae, isolated from Salicornia europaea

scientific article published on 25 October 2018

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