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List of works by John Penders

<i>Enterobacteriaceae</i> and <i>Bacteroidaceae</i> provide resistance to travel-associated intestinal colonization by multi-drug resistant <i>Escherichia coli</i>

scientific article published in 2022

A new poly(1,3-trimethylene carbonate) film provides effective adhesion reduction after major abdominal surgery in a rat model.

scientific article published on 30 March 2015

Advantages and Limitations of Direct PCR Amplification of Bacterial 16S-rDNA from Resected Heart Tissue or Swabs Followed by Direct Sequencing for Diagnosing Infective Endocarditis: A Retrospective Analysis in the Routine Clinical Setting

scientific article published on 24 March 2016

An ADAM33 polymorphism associates with progression of preschool wheeze into childhood asthma: a prospective case-control study with replication in a birth cohort study.

scientific article

Antibiotic resistance of motile aeromonads in indoor catfish and eel farms in the southern part of The Netherlands.

scientific article published on 21 December 2007

Bile acids drive the newborn's gut microbiota maturation

scientific article published on 23 July 2020

Breast-feeding duration and infant atopic manifestations, by maternal allergic status, in the first 2 years of life (KOALA study).

scientific article published on 12 July 2007

Breastfeeding and Infant Eczema in the First Year of Life in the KOALA Birth Cohort Study: A Risk Period-Specific Analysis

scientific article published in January 2007

CX3CR1 is a gatekeeper for intestinal barrier integrity in mice: Limiting steatohepatitis by maintaining intestinal homeostasis

scientific article published on 14 July 2015

Can the composition of the intestinal microbiota predict the development of urinary tract infections?

scientific article published on 27 October 2016

Carriage of Blastocystis spp. in travellers - A prospective longitudinal study

scientific article published on 19 June 2018

Complex narratives of health, stigma and control: Antimicrobial resistance screening among non-hospitalized refugees

article

Composition and stability of intestinal microbiota of healthy children within a Dutch population

scientific article published on 11 December 2015

Consumption of organic foods and risk of atopic disease during the first 2 years of life in the Netherlands

scientific article published on 29 August 2007

Cross-sectional study on surveillance of surgical site infections after vascular surgery

scientific article

Cytokines and soluble CD14 in breast milk in relation with atopic manifestations in mother and infant (KOALA Study)

scientific article published in December 2006

Destination shapes antibiotic resistance gene acquisitions, abundance increases, and diversity changes in Dutch travelers

scientific article published on 07 June 2021

Detection of the plasmid-mediated colistin-resistance gene mcr-1 in faecal metagenomes of Dutch travellers.

scientific article published on 23 August 2016

Development of the Microbiota and Associations With Birth Mode, Diet, and Atopic Disorders in a Longitudinal Analysis of Stool Samples, Collected From Infancy Through Early Childhood

scientific article published on 18 January 2020

Dissemination of Antimicrobial Resistance in Microbial Ecosystems through Horizontal Gene Transfer

scientific article

Dissemination of the mcr-1 colistin resistance gene

Does a prenatal bacterial microbiota exist?

Early Life Antibiotic Exposure and Weight Development in Children.

scientific article published on 6 July 2016

Early Life Exposure to Antibiotics and the Subsequent Development of Eczema, Wheeze, and Allergic Sensitization in the First 2 Years of Life: The KOALA Birth Cohort Study

scientific article published in January 2007

Early growth characteristics and the risk of reduced lung function and asthma: A meta-analysis of 25,000 children

scientific article published on 5 November 2015

Enteropathogenic viruses: triggers for exacerbation in IBD? A prospective cohort study using real-time quantitative polymerase chain reaction

scientific article published in January 2013

Establishment of the intestinal microbiota and its role for atopic dermatitis in early childhood

article

Etiology of atopy in infancy: the KOALA Birth Cohort Study

scientific article published in December 2005

Factors influencing the composition of the intestinal microbiota in early infancy

scientific article (publication date: August 2006)

Fecal carriage of <i>vanB</i> antibiotic resistance gene affects adipose tissue function under vancomycin use

scientific article published on 01 January 2022

Fecal microbial composition of ulcerative colitis and Crohn's disease patients in remission and subsequent exacerbation

scientific article

Folic acid use in pregnancy and the development of atopy, asthma, and lung function in childhood.

scientific article

Genetic variation in FADS genes and plasma cholesterol levels in 2-year-old infants: KOALA Birth Cohort Study

scientific article published on 8 May 2013

Global phylogenetic analysis of Escherichia coli and plasmids carrying the mcr-1 gene indicates bacterial diversity but plasmid restriction

scientific article

Gut Colonization by Methanogenic Archaea Is Associated with Organic Dairy Consumption in Children.

scientific article published on 10 March 2017

Gut Microbiota and Body Weight in School-Aged Children: The KOALA Birth Cohort Study ⬇️

article by Catherine A. Mbakwa et al published 8 October 2018 in Obesity

Gut colonization with methanobrevibacter smithii is associated with childhood weight development.

scientific article published on 2 November 2015

Gut microbiota composition and development of atopic manifestations in infancy: the KOALA Birth Cohort Study

scientific article published on 17 October 2006

Gut microbiota composition in relation to the metabolic response to 12-week combined polyphenol supplementation in overweight men and women

scientific article published on 07 June 2017

Gut microbiota composition strongly correlates to peripheral insulin sensitivity in obese men but not in women

scientific article published on 16 June 2017

Hematopoietic Npc1 mutation shifts gut microbiota composition in Ldlr-/- mice on a high-fat, high-cholesterol diet

scientific article published on 18 October 2019

Host-microbial interactions in childhood atopy: toll-like receptor 4 (TLR4), CD14, and fecal Escherichia coli.

scientific article

Impact of early events and lifestyle on the gut microbiota and metabolic phenotypes in young school-age children

article by Huanzi Zhong et al published 4 January 2019 in Microbiome

Import and spread of extended-spectrum β-lactamase-producing Enterobacteriaceae by international travellers (COMBAT study): a prospective, multicentre cohort study

scientific article published on 14 October 2016

Infant antibiotic use and wheeze and asthma risk: a systematic review and meta-analysis

scientific article published on 13 January 2011

Influence of probiotic supplementation on the developing microbiota in human preterm neonates

scientific article published on 01 November 2020

Influence of vitamin D on key bacterial taxa in infant microbiota in the KOALA Birth Cohort Study

scientific article

Inhibition of human glutathione S-transferase P1-1 by tocopherols and alpha-tocopherol derivatives

scientific article published in July 2001

Integrative genomic analysis identifies a role for intercellular adhesion molecule 1 in childhood asthma

scientific article published on 06 January 2014

Intestinal Microbiota Protects against MCD Diet-Induced Steatohepatitis ⬇️

journal article from 'International Journal of Molecular Sciences' published in 2019

Intestinal lactobacilli and the DC-SIGN gene for their recognition by dendritic cells play a role in the aetiology of allergic manifestations

scientific article published on 9 September 2010

Intestinal microbiota and diet in IBS: causes, consequences, or epiphenomena?

scientific article

Is clostridium difficile associated with relapse of inflammatory bowel disease? results from a retrospective and prospective cohort study in the Netherlands.

scientific article published on September 2013

Is microscopic colitis a drug-induced disease?

scientific article

Is the impact of starvation on the gut microbiota specific or unspecific to anorexia nervosa? A narrative review based on a systematic literature search.

scientific article published on 17 January 2018

Long-Term Green Tea Supplementation Does Not Change the Human Gut Microbiota

scientific article

Maternal and child's vitamin D supplement use and vitamin D level in relation to childhood lung function: the KOALA Birth Cohort Study

scientific article published on 21 March 2011

Maternal complications in pregnancy and wheezing in early childhood: a pooled analysis of 14 birth cohorts

scientific article published on 27 January 2015

Maternal fatty acid status in pregnancy and childhood atopic manifestations: KOALA Birth Cohort Study

scientific article published on 24 January 2011

Maternal smoking during pregnancy and childhood overweight and fat distribution: the KOALA Birth Cohort Study

scientific article published on 30 January 2013

Mode and place of delivery, gastrointestinal microbiota, and their influence on asthma and atopy

scientific article published in November 2011

Molecular fingerprinting of the intestinal microbiota of infants in whom atopic eczema was or was not developing.

scientific article

New insights into the hygiene hypothesis in allergic diseases: mediation of sibling and birth mode effects by the gut microbiota

scientific article

On the origin of species: Factors shaping the establishment of infant's gut microbiota.

scientific article published on 26 November 2015

Probiotics in the management of inflammatory bowel disease: a systematic review of intervention studies in adult patients

scientific article

Project Earthrise: Proceedings of the Ninth Annual Conference of inVIVO Planetary Health

scientific article published in 2021

Prolonged carriage and potential onward transmission of carbapenemase-producing Enterobacteriaceae in Dutch travelers

scientific article published on 30 June 2016

Quantification of Bifidobacterium spp., Escherichia coli and Clostridium difficile in faecal samples of breast-fed and formula-fed infants by real-time PCR.

scientific article

Relationship between physical activity and the development of body mass index in children

scientific article published in January 2014

Risk of acquisition of human diarrhoeagenic Escherichia coli virulence genes in intercontinental travellers: A prospective, multi-centre study

article

Study protocol on the role of intestinal microbiota in colorectal cancer treatment: a pathway to personalized medicine 2.0.

scientific article

The ATG16L1-T300A allele impairs clearance of pathosymbionts in the inflamed ileal mucosa of Crohn's disease patients

scientific article

The Carriage Of Multiresistant Bacteria After Travel (COMBAT) prospective cohort study: methodology and design

scientific article

The cutaneous microbiome in hospitalized patients with pressure ulcers

scientific article published on 06 April 2020

The effect of sampling and storage on the fecal microbiota composition in healthy and diseased subjects.

scientific article published on 29 May 2015

The fecal and mucosal microbiome in acute appendicitis patients: an observational study

scientific article published on 21 January 2019

The fecal microbiota as a biomarker for disease activity in Crohn's disease

scientific article published on 13 October 2016

The gut resistome is highly dynamic during the first months of life.

scientific article published on 11 April 2016

The human microbiome as a reservoir of antimicrobial resistance.

scientific article published on 17 April 2013

The importance of gender-stratified antibiotic resistance surveillance of unselected uropathogens: a Dutch Nationwide Extramural Surveillance study

scientific article

The intestinal microbiota composition and weight development in children: the KOALA Birth Cohort Study.

scientific article published on 9 October 2014

The neonatal window of opportunity-early priming for life.

scientific article published on 13 December 2017

The role of the intestinal microbiota in the development of atopic disorders.

scientific article

Timing of infection and development of wheeze, eczema, and atopic sensitization during the first 2 yr of life: the KOALA Birth Cohort Study

scientific article published on September 2010

Towards standards for human fecal sample processing in metagenomic studies.

scientific article

Transient early wheeze and lung function in early childhood associated with chronic obstructive pulmonary disease genes

scientific article published on 22 July 2013

Travel-related acquisition of diarrhoeagenic bacteria, enteral viruses and parasites in a prospective cohort of 98 Dutch travellers

scientific article published on 22 August 2017

Volatile metabolites in breath strongly correlate with gut microbiome in CD patients

scientific article published on 30 March 2018

Weight gain in anorexia nervosa does not ameliorate the faecal microbiota, branched chain fatty acid profiles, and gastrointestinal complaints

scientific article published on 27 May 2016

microViz: an R package for microbiome data visualization and statistics

scientific article published on 10 July 2021

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