List of works - Peter A.C. 't Hoen

The FAIR Guiding Principles for scientific data management and stewardship

scientific article (publication date: 15 March 2016)

Transcriptome and genome sequencing uncovers functional variation in humans

scientific article

Systematic identification of trans eQTLs as putative drivers of known disease associations

scientific article (publication date: October 2013)

A promoter-level mammalian expression atlas

scientific article

Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions

scientific article

Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure

scientific article

Gateways to the FANTOM5 promoter level mammalian expression atlas

scientific article

Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories

scientific article published on 15 September 2013

Alternative mRNA transcription, processing, and translation: insights from RNA sequencing

scientific article

Disease variants alter transcription factor levels and methylation of their binding sites

scientific article published on 5 December 2016

Identification of context-dependent expression quantitative trait loci in whole blood

scientific article published on 5 December 2016

Prorenin Induces Intracellular Signaling in Cardiomyocytes Independently of Angiotensin II

scientific article published on 28 August 2006

Genetic variation in T-box binding element functionally affects SCN5A/SCN10A enhancer

scientific article

Poly(A) binding protein nuclear 1 levels affect alternative polyadenylation

scientific article

Blood lipids influence DNA methylation in circulating cells

scientific article published on 27 June 2016

Phage display screening without repetitious selection rounds

scientific article

Genome-wide assessment of differential roles for p300 and CBP in transcription regulation

scientific article

Genome-wide association study identifies novel genetic variants contributing to variation in blood metabolite levels

scientific article

Affinity proteomics within rare diseases: a BIO-NMD study for blood biomarkers of muscular dystrophies

scientific article

T-box transcription factor TBX3 reprogrammes mature cardiac myocytes into pacemaker-like cells.

scientific article published on 14 March 2012

Tbx2 and Tbx3 induce atrioventricular myocardial development and endocardial cushion formation

scientific article

Low dystrophin levels increase survival and improve muscle pathology and function in dystrophin/utrophin double-knockout mice

scientific article

Muscle regeneration in dystrophin-deficient mdx mice studied by gene expression profiling

scientific article

The effects of low levels of dystrophin on mouse muscle function and pathology

scientific article

Fibronectin is a serum biomarker for Duchenne muscular dystrophy

New methods for next generation sequencing based microRNA expression profiling

scientific article

Tumor cell migration screen identifies SRPK1 as breast cancer metastasis determinant

scientific article

Common pathological mechanisms in mouse models for muscular dystrophies

article

Fluorescent labelling of cRNA for microarray applications

scientific article

Coexpression network analysis identifies transcriptional modules related to proastrocytic differentiation and sprouty signaling in glioma.

scientific article published in December 2010

Exploring the transcriptome of ciliated cells using in silico dissection of human tissues

scientific article

Molecular and phenotypic characterization of a mouse model of oculopharyngeal muscular dystrophy reveals severe muscular atrophy restricted to fast glycolytic fibres

scientific article

Validation of genetic modifiers for Duchenne muscular dystrophy: a multicentre study assessing SPP1 and LTBP4 variants

scientific article

Generation and Characterization of Transgenic Mice with the Full-length HumanDMDGene

scientific article published in Journal of Biological Chemistry

Serum protein profiling in mice: identification of Factor XIIIa as a potential biomarker for muscular dystrophy

scientific article

Integrated analysis of microRNA and mRNA expression: adding biological significance to microRNA target predictions

scientific article published on 14 June 2013

Comparison of skeletal muscle pathology and motor function of dystrophin and utrophin deficient mouse strains

scholarly article by Maaike van Putten et al published May 2012 in Neuromuscular Disorders

Insight in genome-wide association of metabolite quantitative traits by exome sequence analyses

scientific article

Proteomic analysis of the dysferlin protein complex unveils its importance for sarcolemmal maintenance and integrity

scientific article

Roux-en-Y gastric bypass surgery, but not calorie restriction, reduces plasma branched-chain amino acids in obese women independent of weight loss or the presence of type 2 diabetes

scientific article published on 14 October 2014

Age-related accrual of methylomic variability is linked to fundamental ageing mechanisms

scientific article published on 22 September 2016

Increased sensitivity of next generation sequencing-based expression profiling after globin reduction in human blood RNA.

scientific article

Relative power and sample size analysis on gene expression profiling data.

scientific article

Novel protein-protein interactions inferred from literature context

scientific article (publication date: 18 November 2009)

Can subtle changes in gene expression be consistently detected with different microarray platforms?

scientific article

Huntington's disease biomarker progression profile identified by transcriptome sequencing in peripheral blood

scientific article

CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes

scientific article

Fcγ receptor IIb strongly regulates Fcγ receptor-facilitated T cell activation by dendritic cells

scientific article

Deregulation of the ubiquitin-proteasome system is the predominant molecular pathology in OPMD animal models and patients

scientific article published on 4 April 2011

Large-scale gene expression analysis of human skeletal myoblast differentiation.

scientific article

List of works by Peter A.C. 't Hoen

The FAIR Guiding Principles for scientific data management and stewardship

Transcriptome and genome sequencing uncovers functional variation in humans

Systematic identification of trans eQTLs as putative drivers of known disease associations

A promoter-level mammalian expression atlas

Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions

Genome-wide association study identifies six new loci influencing pulse pressure and mean arterial pressure

Gateways to the FANTOM5 promoter level mammalian expression atlas

Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories

Alternative mRNA transcription, processing, and translation: insights from RNA sequencing

Disease variants alter transcription factor levels and methylation of their binding sites

Identification of context-dependent expression quantitative trait loci in whole blood

Prorenin Induces Intracellular Signaling in Cardiomyocytes Independently of Angiotensin II

Genetic variation in T-box binding element functionally affects SCN5A/SCN10A enhancer

Poly(A) binding protein nuclear 1 levels affect alternative polyadenylation

Blood lipids influence DNA methylation in circulating cells

Phage display screening without repetitious selection rounds

Genome-wide assessment of differential roles for p300 and CBP in transcription regulation

Genome-wide association study identifies novel genetic variants contributing to variation in blood metabolite levels

Affinity proteomics within rare diseases: a BIO-NMD study for blood biomarkers of muscular dystrophies

T-box transcription factor TBX3 reprogrammes mature cardiac myocytes into pacemaker-like cells.

Tbx2 and Tbx3 induce atrioventricular myocardial development and endocardial cushion formation

Low dystrophin levels increase survival and improve muscle pathology and function in dystrophin/utrophin double-knockout mice

Muscle regeneration in dystrophin-deficient mdx mice studied by gene expression profiling

The effects of low levels of dystrophin on mouse muscle function and pathology

Fibronectin is a serum biomarker for Duchenne muscular dystrophy

New methods for next generation sequencing based microRNA expression profiling

Tumor cell migration screen identifies SRPK1 as breast cancer metastasis determinant

Common pathological mechanisms in mouse models for muscular dystrophies

Fluorescent labelling of cRNA for microarray applications

Coexpression network analysis identifies transcriptional modules related to proastrocytic differentiation and sprouty signaling in glioma.

Exploring the transcriptome of ciliated cells using in silico dissection of human tissues

Molecular and phenotypic characterization of a mouse model of oculopharyngeal muscular dystrophy reveals severe muscular atrophy restricted to fast glycolytic fibres

Validation of genetic modifiers for Duchenne muscular dystrophy: a multicentre study assessing SPP1 and LTBP4 variants

Generation and Characterization of Transgenic Mice with the Full-length HumanDMDGene

Serum protein profiling in mice: identification of Factor XIIIa as a potential biomarker for muscular dystrophy

Integrated analysis of microRNA and mRNA expression: adding biological significance to microRNA target predictions

Comparison of skeletal muscle pathology and motor function of dystrophin and utrophin deficient mouse strains

Insight in genome-wide association of metabolite quantitative traits by exome sequence analyses

Proteomic analysis of the dysferlin protein complex unveils its importance for sarcolemmal maintenance and integrity

Roux-en-Y gastric bypass surgery, but not calorie restriction, reduces plasma branched-chain amino acids in obese women independent of weight loss or the presence of type 2 diabetes

Age-related accrual of methylomic variability is linked to fundamental ageing mechanisms

Increased sensitivity of next generation sequencing-based expression profiling after globin reduction in human blood RNA.

Relative power and sample size analysis on gene expression profiling data.

Novel protein-protein interactions inferred from literature context

Can subtle changes in gene expression be consistently detected with different microarray platforms?

Huntington's disease biomarker progression profile identified by transcriptome sequencing in peripheral blood

CORE_TF: a user-friendly interface to identify evolutionary conserved transcription factor binding sites in sets of co-regulated genes

Fcγ receptor IIb strongly regulates Fcγ receptor-facilitated T cell activation by dendritic cells

Deregulation of the ubiquitin-proteasome system is the predominant molecular pathology in OPMD animal models and patients

Large-scale gene expression analysis of human skeletal myoblast differentiation.