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Authors whose works are in public domain in at least one jurisdiction

List of works by Ronald P de Vries

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The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

scientific article
Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis

scientific article
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88

scientific article
Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea

scientific article
Finished genome of the fungal wheat pathogen Mycosphaerella graminicola reveals dispensome structure, chromosome plasticity, and stealth pathogenesis

scientific article
Aspergillus enzymes involved in degradation of plant cell wall polysaccharides

scientific article
Genome sequence of the model mushroom Schizophyllum commune

scientific article
The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi

scientific article
Genome sequence of the necrotrophic plant pathogen Pythium ultimum reveals original pathogenicity mechanisms and effector repertoire

scientific article
Fungal enzyme sets for plant polysaccharide degradation

scientific article
The genome sequence of the model ascomycete fungus Podospora anserina

scientific article
The amsterdam declaration on fungal nomenclature

scientific article
Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris

scientific article
Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

scientific article published on 8 October 2012
Comparative genomics of Ceriporiopsis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis

scientific article published on 20 March 2012
The transcriptional activator XlnR regulates both xylanolytic and endoglucanase gene expression in Aspergillus niger.

scientific article published on October 1998
The genomes of the fungal plant pathogens Cladosporium fulvum and Dothistroma septosporum reveal adaptation to different hosts and lifestyles but also signatures of common ancestry

scientific article
Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen

scientific article published on 28 March 2012
Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

scientific article
Complementary symbiont contributions to plant decomposition in a fungus-farming termite.

scientific article
The secretome of the maize pathogen Ustilago maydis

scientific article published on 31 March 2008
Plant-polysaccharide-degrading enzymes from Basidiomycetes

scientific article
Mannitol is required for stress tolerance in Aspergillus niger conidiospores

scientific article
Modern taxonomy of biotechnologically important Aspergillus and Penicillium species

scientific article
Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication

scientific article
Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae

scientific article published on March 2009
The 2008 update of the Aspergillus nidulans genome annotation: a community effort

scientific article
CreA modulates the XlnR-induced expression on xylose of Aspergillus niger genes involved in xylan degradation

article
Spatial differentiation in the vegetative mycelium of Aspergillus niger

scientific article published on 19 October 2007
Resolving the polyphyletic nature of Pyricularia (Pyriculariaceae).

scientific article
Secondary metabolite profiling, growth profiles and other tools for species recognition and important Aspergillus mycotoxins.

scientific article published in January 2007
Biotechnological applications and potential of fungal feruloyl esterases based on prevalence, classification and biochemical diversity

scientific article published on November 2007
Analysis of regulation of pentose utilisation in Aspergillus niger reveals evolutionary adaptations in Eurotiales

scientific article published on June 30, 2011
Expression profiling of pectinolytic genes from Aspergillus niger

scientific article published in October 2002
Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level

scientific article
Construction of a cellulase hyper-expression system in Trichoderma reesei by promoter and enzyme engineering

scientific article (publication date: 8 February 2012)
Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse

scientific article published on 18 October 2011
Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize

scientific article
The Aspergillus niger faeB gene encodes a second feruloyl esterase involved in pectin and xylan degradation and is specifically induced in the presence of aromatic compounds

scientific article published on April 2002
Closely related fungi employ diverse enzymatic strategies to degrade plant biomass

scientific article
Current challenges of research on filamentous fungi in relation to human welfare and a sustainable bio-economy: a white paper.

scientific article published on 31 August 2016
Regulation of pentose utilisation by AraR, but not XlnR, differs in Aspergillus nidulans and Aspergillus niger

scientific article
Similar is not the same: differences in the function of the (hemi-)cellulolytic regulator XlnR (Xlr1/Xyr1) in filamentous fungi.

scientific article
Aspergillus niger RhaR, a regulator involved in L-rhamnose release and catabolism

scientific article published on 28 February 2014
Prevalence of transcription factors in ascomycete and basidiomycete fungi

scientific article
Establishment of compatibility in the Ustilago maydis/maize pathosystem

scientific article published on 01 October 2007
Degradation of different pectins by fungi: correlations and contrasts between the pectinolytic enzyme sets identified in genomes and the growth on pectins of different origin

scientific article
Regulators of plant biomass degradation in ascomycetous fungi.

scientific article
A broader role for AmyR in Aspergillus niger: regulation of the utilisation of D-glucose or D-galactose containing oligo- and polysaccharides

scientific article published on 27 August 2011
Bacillus subtilis attachment to Aspergillus niger hyphae results in mutually altered metabolism

scientific article

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