List of works by Sergio Verjovski Almeida

A Regulatory miRNA-mRNA Network Is Associated with Tissue Repair Induced by Mesenchymal Stromal Cells in Acute Kidney Injury

scientific article

A quantitative view of the transcriptome of Schistosoma mansoni adult-worms using SAGE

scientific article

ANTISENSE INTRONIC NON-CODING RNA LEVELS IN PANCREATIC CANCER

ARHGAP21 is a RhoGAP for RhoA and RhoC with a role in proliferation and migration of prostate adenocarcinoma cells

scientific article published on 28 November 2012

Abstract 1168: Identification of CNA signatures in prostate cancer: Narrowing chromosome regions related with occurrence, prognosis and recurrence after treatment

Analysis of Schistosoma mansoni genes shared with Deuterostomia and with possible roles in host interactions

scientific article

Androgen responsive intronic non-coding RNAs

scientific article

Antisense intronic non-coding RNA levels correlate to the degree of tumor differentiation in prostate cancer

scientific article

Apert p.Ser252Trp mutation in FGFR2 alters osteogenic potential and gene expression of cranial periosteal cells

scientific article

As antisense RNA gets intronic

scientific article

Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes

article

Auto-antibodies in prostate cancer: humoral immune response to antigenic determinants coded by the differentially expressed transcripts FLJ23438 and VAMP3.

scientific article published on October 2006

Brazilian Symposium on Bioinformatics

article

Bursts of transposition from non-long terminal repeat retrotransposon families of the RTE clade in Schistosoma mansoni

scientific article published on 16 December 2009

Characterization and immunolocalization of an NTP diphosphohydrolase of Trypanosoma cruzi

scientific article published in April 2004

Characterization and localization of an ATP-diphosphohydrolase on the external surface of the tegument of Schistosoma mansoni

scientific article published on 01 April 1993

Characterization of Schistosoma mansoni ATPDase2 gene, a novel apyrase family member

article

Chromatin Landscape Distinguishes the Genomic Loci of Hundreds of Androgen-Receptor-Associated LincRNAs From the Loci of Non-associated LincRNAs.

scientific article

Cloning the genes and DNA binding properties of High Mobility Group B1 (HMGB1) proteins from the human blood flukes Schistosoma mansoni and Schistosoma japonicum.

scientific article published on 27 April 2006

Combinatory microarray and SuperSAGE analyses identify pairing-dependently transcribed genes in Schistosoma mansoni males, including follistatin

scientific article

Comparative genomics of two Leptospira interrogans serovars reveals novel insights into physiology and pathogenesis

scientific article

Concepts on Microarray Design for Genome and Transcriptome Analyses

Conserved tissue expression signatures of intronic noncoding RNAs transcribed from human and mouse loci

scientific article published on 21 May 2008

Correction: Metagenomic Analysis of a Tropical Composting Operation at the São Paulo Zoo Park Reveals Diversity of Biomass Degradation Functions and Organisms.

scientific article

Corrigendum: HIPSTR and thousands of lncRNAs are heterogeneously expressed in human embryos, primordial germ cells and stable cell lines

scientific article

Current developments on Schistosoma proteomics

scientific article published on May 2008

Curupira-1 and Curupira-2, two novel Mutator-like DNA transposons from the genomes of human parasites Schistosoma mansoni and Schistosoma japonicum.

scientific article

DNA microarray-based genome comparison of a pathogenic and a nonpathogenic strain of Xylella fastidiosa delineates genes important for bacterial virulence

scientific article

Detection of an initial burst of Ca2+ translocation in sarcoplasmic reticulum

scientific article

Different gene expression profiles in iPSC-derived motor neurons from ALS8 patients with variable clinical courses suggest mitigating pathways for neurodegeneration

scientific article published on 13 April 2020

Differential gene expression elicited by ZIKV infection in trophoblasts from congenital Zika syndrome discordant twins

scientific article published on 03 August 2020

Directed gap closure in large-scale sequencing projects

scientific article

Discordant congenital Zika syndrome twins show differential in vitro viral susceptibility of neural progenitor cells

scientific article published on 2 February 2018

Dissociation of F-actin induced by hydrostatic pressure

scientific article published on 01 November 1992

Divalent cation dependence and inhibition of Schistosoma mansoni ATP diphosphohydrolase by fluorosulfonylbenzoyl adenosine

scientific article published on 01 January 1998

Dynamic Expression of Long Non-Coding RNAs Throughout Parasite Sexual and Neural Maturation in Schistosoma japonicum

scientific article published on 01 April 2020

E Schistosoma mansoni at the molecular and cellular biology of helminth parasites VI meeting

scientific article published on 01 June 2011

ESTWeb: bioinformatics services for EST sequencing projects

scientific article published in August 2003

Effect of human TGF-β on the gene expression profile of Schistosoma mansoni adult worms

scientific article published on 25 February 2012

Effects of curcumin on the parasite Schistosoma mansoni: A transcriptomic approach

scientific article published in 2013

Effects of proteasome inhibitor MG-132 on the parasite Schistosoma mansoni

scientific article published on 12 September 2017

Evaluation of reference-based two-color methods for measurement of gene expression ratios using spotted cDNA microarrays.

scientific article

Exploring the Schistosoma mansoni adult male transcriptome using RNA-seq

scientific article

Expression analysis and in silico characterization of intronic long noncoding RNAs in renal cell carcinoma: emerging functional associations

scientific article

Gender biased differential alternative splicing patterns of the transcriptional cofactor CA150 gene in Schistosoma mansoni.

scientific article published on 26 July 2006

Gene expression arrays in cancer research: methods and applications

scientific article

Gene expression profile of mesenchymal stem cells from paired umbilical cord units: cord is different from blood

scientific article

Gene expression profiling reveals molecular marker candidates of laryngeal squamous cell carcinoma.

scientific article published in March 2009

Gene structure and splicing in schistosomes

scientific article published on April 2011

Genome mapping and expression analyses of human intronic noncoding RNAs reveal tissue-specific patterns and enrichment in genes related to regulation of transcription

scientific article published on January 2007

Genome sequence of Aedes aegypti, a major arbovirus vector

scientific article

Global analysis of biogenesis, stability and sub-cellular localization of lncRNAs mapping to intragenic regions of the human genome

scientific article

HIPSTR and thousands of lncRNAs are heterogeneously expressed in human embryos, primordial germ cells and stable cell lines

scientific article

Hematopoietic cell kinase (HCK) is a potential therapeutic target for dysplastic and leukemic cells due to integration of erythropoietin/PI3K pathway and regulation of erythropoiesis: HCK in erythropoietin/PI3K pathway.

scientific article published on 10 November 2016

Heterologous expression of sarcoplasmic reticulum Ca(2+)-ATPase.

scientific article published on April 1996

High-quality draft genome sequence resources of eight Xylella fastidiosa strains isolated from citrus, coffee, plum and hibiscus in South America

scientific article published on 10 June 2020

Histone deacetylase inhibition modulates histone acetylation at gene promoter regions and affects genome-wide gene transcription in Schistosoma mansoni

scientific article

Human TNF-α induces differential protein phosphorylation in Schistosoma mansoni adult male worms

scientific article

Human malaria parasites display a receptor for activated C kinase ortholog

scientific article (publication date: 11 July 2003)

IDENTIFICATION OF PROTEIN-CODING AND NONCODING GENE EXPRESSION SIGNATURES CORRELATED WITH MALIGNANT TRANSFORMATION AND METASTASES IN PANCREATIC CANCER

article

Identification of 18 new transcribed retrotransposons in Schistosoma mansoni.

scientific article published in July 2005

Identification of a gene expression signature correlated to breast cancer prognosis

article

Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma

scientific article published on 2 August 2016

Identification of protein-coding and intronic noncoding RNAs down-regulated in clear cell renal carcinoma.

scientific article

Identification of protein-coding and non-coding RNA expression profiles in CD34+ and in stromal cells in refractory anemia with ringed sideroblasts

scientific article

Identification of the Schistosoma mansoni TNF-alpha receptor gene and the effect of human TNF-alpha on the parasite gene expression profile.

scientific article

Imatinib treatment causes substantial transcriptional changes in adult Schistosoma mansoni in vitro exhibiting pleiotropic effects

scientific article (publication date: June 2014)

Immunization with tegument nucleotidases associated with a subcurative praziquantel treatment reduces worm burden following Schistosoma mansoni challenge.

scientific article published on 2 April 2013

In vitro activity of aryl-thiazole derivatives against Schistosoma mansoni schistosomula and adult worms

scientific article published on 25 November 2019

Influence of Ecto-nucleoside triphosphate diphosphohydrolase activity on Trypanosoma cruzi infectivity and virulence

scientific article

Inhibition of bacterial motility and spreading via release of cranberry derived materials from silicone substrates

scientific article published on 29 April 2013

Inhibition of histone methyltransferase EZH2 in Schistosoma mansoni in vitro by GSK343 reduces egg laying and decreases the expression of genes implicated in DNA replication and noncoding RNA metabolism

article

Interaction of an esophageal MEG protein from schistosomes with a human S100 protein involved in inflammatory response

scientific article

Interaction of spin-labeled nucleotides with sarcoplasmic reticulum adenosinetriphosphatase

scientific article published in August 1988

Interference with hemozoin formation represents an important mechanism of schistosomicidal action of antimalarial quinoline methanols

scientific article

Jagged 1 Rescues the Duchenne Muscular Dystrophy Phenotype

scientific article

Jagged1 as a modifier of the DMD phenotype: What is next?

Large-scale transcriptome analyses reveal new genetic marker candidates of head, neck, and thyroid cancer.

scientific article

Long intronic noncoding RNA transcription: expression noise or expression choice?

scientific article published on 18 December 2008

Long non-coding RNA INXS is a critical mediator of BCL-XS induced apoptosis

scientific article (publication date: July 2014)

Long non-coding RNAs and their implications in cancer epigenetics.

scientific article published on 30 August 2013

Long noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer

scientific article published on 13 November 2011

Loss of caspase 7 expression is associated with poor prognosis in renal cell carcinoma clear cell subtype

scientific article

Mapping transposon insertion sites by touchdown PCR and hybrid degenerate primers

scientific article

Metagenomic analysis of a tropical composting operation at the são paulo zoo park reveals diversity of biomass degradation functions and organisms

scientific article

Molecular characterization and immunolocalization of Schistosoma mansoni ATP-diphosphohydrolase

scientific article published on 01 August 2003

N-terminal chimeric constructs improve the expression of sarcoplasmic reticulum Ca2+-ATPase in yeast

article

Non-coding RNAs in schistosomes: an unexplored world

scientific article published on June 2011

Non-coding transcription characterization and annotation: a guide and web resource for non-coding RNA databases

scientific article published on March 2012

PH-induced changes in the reactions controlled by the low- and high-affinity Ca2+-binding sites in sarcoplasmic reticulum

scientific article published on January 1977

Partial reactions in the catalytic and transport cycle of sarcoplasmic reticulum ATPase

scientific article published on November 1978

Perspectives of Long Non-Coding RNAs in Cancer Diagnostics

scientific article

Pharmacological inhibition of lysine-specific demethylase 1 (LSD1) induces global transcriptional deregulation and ultrastructural alterations that impair viability in Schistosoma mansoni

scientific article published on 01 July 2020

Probing the SERCA1a sarcoplasmic reticulum Ca2+-ATPase phosphorylation-site mutant D351E with inorganic phosphate

scientific article published on 31 July 2007

Proliferation-associated genes correlated to hormonal receptors and Ki-67 status in breast carcinomas

article

Protein variation in blood-dwelling schistosome worms generated by differential splicing of micro-exon gene transcripts

scientific article

Protein-coding genes and long noncoding RNAs are differentially expressed in dasatinib-treated chronic myeloid leukemia patients with resistance to imatinib

scientific article published on 25 November 2013

Publisher Correction: Discordant congenital Zika syndrome twins show differential in vitro viral susceptibility of neural progenitor cells

scientific article published on 13 March 2018

RASL11A, member of a novel small monomeric GTPase gene family, is down-regulated in prostate tumors

scientific article

Rapid kinetics of calcium ion transport and ATPase activity in the sarcoplasmic reticulum of dystrophic muscle

scientific article

Repression of phosphatidylinositol transfer protein α ameliorates the pathology of Duchenne muscular dystrophy

scientific article published on 22 May 2017

Requirement of the hinge domain for dimerization of Ca2+-ATPase large cytoplasmic portion expressed in bacteria.

scientific article

Retraction: Long non-coding RNA INXS is a critical mediator of BCL-XS induced apoptosis

scientific article published on 9 August 2016

Rhesus macaques self-curing from a schistosome infection can display complete immunity to challenge

scientific article published on 26 October 2021

Saci-1, -2, and -3 and Perere, Four Novel Retrotransposons with High Transcriptional Activities from the Human Parasite Schistosoma mansoni.

scientific article published in May 2004

Saci-1, -2, and -3 and Perere, four novel retrotransposons with high transcriptional activities from the human parasite Schistosoma mansoni

scientific article

Schistosoma mansoni Egg, Adult Male and Female Comparative Gene Expression Analysis and Identification of Novel Genes by RNA-Seq

scientific article published on 31 December 2015

Schistosoma mansoni TGF-beta receptor II: role in host ligand-induced regulation of a schistosome target gene

scientific article

Schistosoma mansoni histones: from transcription to chromatin regulation; an in silico analysis

scientific article published on 10 March 2012

Schistosoma mansoni tegument protein Sm29 is able to induce a Th1-type of immune response and protection against parasite infection

scientific article

Schistosoma mansoni: molecular characterization of Alkaline Phosphatase and expression patterns across life cycle stages.

scientific article published on 18 July 2011

Schistosome transcriptome: insights and perspectives for functional genomics.

scientific article published on July 2004

Schistosomes--proteomics studies for potential novel vaccines and drug targets

scientific article published on 11 February 2009

Schistosomiasis--a century searching for chemotherapeutic drugs.

scientific article

Screening the Schistosoma mansoni transcriptome for genes differentially expressed in the schistosomulum stage in search for vaccine candidates.

scientific article

Self-association and modification of calcium binding in solubilized sarcoplasmic reticulum adenosine triphosphatase

scientific article published on 01 February 1983

SmTRC1, a novel Schistosoma mansoni DNA transposon, discloses new families of animal and fungi transposons belonging to the CACTA superfamily

scientific article

SnO 2 -based memristors and the potential synergies of integrating memristors with MEMS

Splice variants of TLE family genes and up-regulation of a TLE3 isoform in prostate tumors

scientific article published on 26 October 2007

Step-by-Step Bioinformatics Analysis of Schistosoma mansoni Long Non-coding RNA Sequences

scientific article published on 01 January 2020

Structure and Function of the Yeast Plasma‐Membrane H+‐ATPasea ⬇️

scientific article published on November 30, 1992

Substitutions of Aspartate 378 in the Phosphorylation Domain of the Yeast PMA1 H+-ATPase Disrupt Protein Folding and Biogenesis

scientific article published in Journal of Biological Chemistry

Synergy of Omeprazole and Praziquantel In Vitro Treatment against Schistosoma mansoni Adult Worms

scientific article

Systems Biology Analysis of the Radiation-Attenuated Schistosome Vaccine Reveals a Role for Growth Factors in Protection and Hemostasis Inhibition in Parasite Survival

scientific article published on 11 March 2021

Systems medicine and integrated care to combat chronic noncommunicable diseases

scientific article

The Aedes aegypti larval transcriptome: a comparative perspective with emphasis on trypsins and the domain structure of peritrophins.

scientific article published on 28 November 2008

The Brazilian contribution to the study of the Schistosoma mansoni transcriptome

scientific article published on 03 May 2008

The Schistosoma mansoni genome encodes thousands of long non-coding RNAs predicted to be functional at different parasite life-cycle stages

scientific article

The antischistosomal potential of GSK-J4, an H3K27 demethylase inhibitor: insights from molecular modeling, transcriptomics and in vitro assays

scientific article published on 17 March 2020

The contribution of 700,000 ORF sequence tags to the definition of the human transcriptome.

scientific article

The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags

scientific article published on 30 October 2003

The intronic long noncoding RNA ANRASSF1 recruits PRC2 to the RASSF1A promoter, reducing the expression of RASSF1A and increasing cell proliferation.

scientific article

The tegument surface membranes of the human blood parasite Schistosoma mansoni: a proteomic analysis after differential extraction

scientific article published in March 2006

Transcriptional regulation differs in affected facioscapulohumeral muscular dystrophy patients compared to asymptomatic related carriers.

scholarly article

Transcriptome analyses of inhibitor-treated schistosome females provide evidence for cooperating Src-kinase and TGFβ receptor pathways controlling mitosis and eggshell formation

scientific article (publication date: 2013)

Transcriptome analysis of the acoelomate human parasite Schistosoma mansoni

scientific article published on 14 September 2003

Use of a 44k oligoarray to explore the transcriptome of Schistosoma mansoni adult worms

scientific article published on 21 April 2007

Use of degenerate primers and touchdown PCR for construction of cDNA libraries

scientific article

Vulnerability of primitive human placental trophoblast to Zika virus

scientific article (publication date: 13 February 2017)

Weighted Gene Co-Expression Analyses Point to Long Non-Coding RNA Hub Genes at Different Schistosoma mansoni Life-Cycle Stages

scientific article published on 12 September 2019

Where do we aspire to publish? A position paper on scientific communication in biochemistry and molecular biology

scientific article published on 29 August 2019

Whole-genome analysis of transporters in the plant pathogen Xylella fastidiosa

scientific article

Zerg: a very fast BLAST parser library

scientific article

["Folie à Famille", an interdisciplinary experience from a clinical and therapeutic stance].

scientific article published in March 2010

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