List of works - Christelle Hennequet-Antier

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

scientific article

Amplification biases: possible differences among deviating gene expressions

scientific article

An Assessment of Fixed and Native Chromatin Preparation Methods to Study Histone Post-Translational Modifications at a Whole Genome Scale in Skeletal Muscle Tissue

scientific article published on 29 August 2017

An integrated approach to bovine oocyte quality: from phenotype to genes.

scientific article

AnovArray: a set of SAS macros for the analysis of variance of gene expression data

scientific article

Broilers divergently selected for digestibility differ for their digestive microbial ecosystems

scientific article published on 18 May 2020

Data set for the proteomic inventory and quantitative analysis of chicken eggshell matrix proteins during the primary events of eggshell mineralization and the active growth phase of calcification

scientific article

Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization.

scientific article

Differential expression and co-expression gene network analyses reveal molecular mechanisms and candidate biomarkers involved in breast muscle myopathies in chicken

scientific article published on 17 October 2019

Early bovine embryos regulate oviduct epithelial cell gene expression during in vitro co-culture

scientific article

Embryonic thermal manipulation has short and long-term effects on the development and the physiology of the Japanese quail

scientific article published on 23 January 2020

Epithelial cell invasion by <i>salmonella</i> typhimurium induces modulation of genes controlled by aryl hydrocarbon receptor signaling and involved in extracellular matrix biogenesis

scientific article published in 2023

Functional genomics of the digestive tract in broilers

scientific article published on 13 December 2018

Gene Expression Profiling Reveals New Potential Players of Gonad Differentiation in the Chicken Embryo ⬇️

scientific article published on September 9, 2011

Gene array analysis of adrenal glands in broiler chickens following ACTH treatment

scientific article

Gene expression profiling to identify eggshell proteins involved in physical defense of the chicken egg.

scientific article

Hen uterine gene expression profiling during eggshell formation reveals putative proteins involved in the supply of minerals or in the shell mineralization process

scientific article

Heterogeneity of persistence of Salmonella enterica serotype Senftenberg strains could explain the emergence of this serotype in poultry flocks

scientific article

Identification of DNA motifs implicated in maintenance of bacterial core genomes by predictive modeling

scientific article

Identification of differentially expressed genes in chickens differing in muscle glycogen content and meat quality

scientific article

Identification of genomic regions and candidate genes for chicken meat ultimate pH by combined detection of selection signatures and QTL.

scientific article

Identifying specific proteins involved in eggshell membrane formation using gene expression analysis and bioinformatics.

scientific article published on 15 October 2015

Insulin immuno-neutralization in fed chickens: effects on liver and muscle transcriptome

scientific article published on 3 January 2012

Mapping QTL for white striping in relation to breast muscle yield and meat quality traits in broiler chickens.

scientific article published on 20 March 2018

Molecular characterization of genomic activities at the onset of zygotic transcription in mammals

scientific article published on 01 December 2002

Muscle transcriptome analysis reveals molecular pathways and biomarkers involved in extreme ultimate pH and meat defect occurrence in chicken.

scientific article published on 25 July 2017

New anti-Müllerian hormone target genes involved in granulosa cell survival in women with polycystic ovary syndrome

scientific article published on 28 November 2020

Prenatal programming by testosterone of follicular theca cell functions in ovary

scientific article published on 20 July 2019

Quantitative proteomics and bioinformatic analysis provide new insight into protein function during avian eggshell biomineralization

scientific article published on 5 October 2014

Quantitative proteomics provides new insights into chicken eggshell matrix protein functions during the primary events of mineralisation and the active calcification phase.

scientific article published on 3 June 2015

Regulation of bovine oocyte-specific transcripts during in vitro oocyte maturation and after maternal-embryonic transition analyzed using a transcriptomic approach.

scientific article published in August 2009

Relationships between digestive efficiency and metabolomic profiles of serum and intestinal contents in chickens.

scientific article published on 27 April 2018

Revealing Pathways Associated with Feed Efficiency and Meat Quality Traits in Slow-Growing Chickens

scientific article published in 2021

Serum and Muscle Metabolomics for the Prediction of Ultimate pH, a Key Factor for Chicken-Meat Quality.

scientific article published on 8 March 2016

Susceptibility to Salmonella carrier-state: a possible Th2 response in susceptible chicks.

scientific article published on 12 March 2014

Thermal Manipulation During Embryogenesis Impacts H3K4me3 and H3K27me3 Histone Marks in Chicken Hypothalamus

scientific article published on 26 November 2019

Thermal manipulation during embryogenesis has long-term effects on muscle and liver metabolism in fast-growing chickens

scientific article

Thermal manipulation of the chicken embryo triggers differential gene expression in response to a later heat challenge

scientific article

Transcriptomic profiling of proteases and antiproteases in the liver of sexually mature hens in relation to vitellogenesis ⬇️

scientific article published on September 5, 2012

ViSEAGO: a Bioconductor package for clustering biological functions using Gene Ontology and semantic similarity

scientific article published on 06 August 2019

List of works by Christelle Hennequet-Antier

A comprehensive evaluation of normalization methods for Illumina high-throughput RNA sequencing data analysis

Amplification biases: possible differences among deviating gene expressions

An Assessment of Fixed and Native Chromatin Preparation Methods to Study Histone Post-Translational Modifications at a Whole Genome Scale in Skeletal Muscle Tissue

An integrated approach to bovine oocyte quality: from phenotype to genes.

AnovArray: a set of SAS macros for the analysis of variance of gene expression data

Broilers divergently selected for digestibility differ for their digestive microbial ecosystems

Data set for the proteomic inventory and quantitative analysis of chicken eggshell matrix proteins during the primary events of eggshell mineralization and the active growth phase of calcification

Data set for the proteomic inventory and quantitative analysis of chicken uterine fluid during eggshell biomineralization.

Differential expression and co-expression gene network analyses reveal molecular mechanisms and candidate biomarkers involved in breast muscle myopathies in chicken

Early bovine embryos regulate oviduct epithelial cell gene expression during in vitro co-culture

Embryonic thermal manipulation has short and long-term effects on the development and the physiology of the Japanese quail

Epithelial cell invasion by <i>salmonella</i> typhimurium induces modulation of genes controlled by aryl hydrocarbon receptor signaling and involved in extracellular matrix biogenesis

Functional genomics of the digestive tract in broilers

Gene Expression Profiling Reveals New Potential Players of Gonad Differentiation in the Chicken Embryo ⬇️

Gene array analysis of adrenal glands in broiler chickens following ACTH treatment

Gene expression profiling to identify eggshell proteins involved in physical defense of the chicken egg.

Hen uterine gene expression profiling during eggshell formation reveals putative proteins involved in the supply of minerals or in the shell mineralization process

Heterogeneity of persistence of Salmonella enterica serotype Senftenberg strains could explain the emergence of this serotype in poultry flocks

Identification of DNA motifs implicated in maintenance of bacterial core genomes by predictive modeling

Identification of differentially expressed genes in chickens differing in muscle glycogen content and meat quality

Identification of genomic regions and candidate genes for chicken meat ultimate pH by combined detection of selection signatures and QTL.

Identifying specific proteins involved in eggshell membrane formation using gene expression analysis and bioinformatics.

Insulin immuno-neutralization in fed chickens: effects on liver and muscle transcriptome

Mapping QTL for white striping in relation to breast muscle yield and meat quality traits in broiler chickens.

Molecular characterization of genomic activities at the onset of zygotic transcription in mammals

Muscle transcriptome analysis reveals molecular pathways and biomarkers involved in extreme ultimate pH and meat defect occurrence in chicken.

New anti-Müllerian hormone target genes involved in granulosa cell survival in women with polycystic ovary syndrome

Prenatal programming by testosterone of follicular theca cell functions in ovary

Quantitative proteomics and bioinformatic analysis provide new insight into protein function during avian eggshell biomineralization

Quantitative proteomics provides new insights into chicken eggshell matrix protein functions during the primary events of mineralisation and the active calcification phase.

Regulation of bovine oocyte-specific transcripts during in vitro oocyte maturation and after maternal-embryonic transition analyzed using a transcriptomic approach.

Relationships between digestive efficiency and metabolomic profiles of serum and intestinal contents in chickens.

Revealing Pathways Associated with Feed Efficiency and Meat Quality Traits in Slow-Growing Chickens

Serum and Muscle Metabolomics for the Prediction of Ultimate pH, a Key Factor for Chicken-Meat Quality.

Susceptibility to Salmonella carrier-state: a possible Th2 response in susceptible chicks.

Thermal Manipulation During Embryogenesis Impacts H3K4me3 and H3K27me3 Histone Marks in Chicken Hypothalamus

Thermal manipulation during embryogenesis has long-term effects on muscle and liver metabolism in fast-growing chickens

Thermal manipulation of the chicken embryo triggers differential gene expression in response to a later heat challenge

Transcriptomic profiling of proteases and antiproteases in the liver of sexually mature hens in relation to vitellogenesis ⬇️

ViSEAGO: a Bioconductor package for clustering biological functions using Gene Ontology and semantic similarity