List of works by Jörg Schultz

4SALE--a tool for synchronous RNA sequence and secondary structure alignment and editing

scientific article

5.8S-28S rRNA interaction and HMM-based ITS2 annotation

scientific article

A common core of secondary structure of the internal transcribed spacer 2 (ITS2) throughout the Eukaryota

scientific article

A kinome of 2600 in the ciliateParamecium tetraurelia

scientific article published on 17 October 2009

A novel conserved family of nitric oxide synthase?

ALVIS: interactive non-aggregative visualization and explorative analysis of multiple sequence alignments.

scientific article published on 26 January 2016

Acquiring Control: The Evolution of Stomatal Signalling Pathways

scientific article published on 20 February 2019

BCdatabaser: on-the-fly reference database creation for (meta-)barcoding

scientific article published on 06 January 2020

Computational integration of genomic traits into 16S rDNA microbiota sequencing studies.

scientific article

Detecting species-site dependencies in large multiple sequence alignments

scientific article published on 6 August 2009

Distinguishing species

scientific article published on 24 July 2007

Evolution of the multifunctional protein tyrosine phosphatase family

scientific article

Evolutionary distances in the twilight zone--a rational kernel approach

scientific article

Exonization of active mouse L1s: a driver of transcriptome evolution?

scientific article

Explorative data analysis of MCL reveals gene expression networks implicated in survival and prognosis supported by explorative CGH analysis

scientific article

Functional organization of the yeast proteome by systematic analysis of protein complexes

scientific article

Genome Expression Pathway Analysis Tool--analysis and visualization of microarray gene expression data under genomic, proteomic and metabolic context

scientific article

Genome of a tardigrade: Horizontal gene transfer or bacterial contamination?

scientific article published on 12 May 2016

Genomes of the Venus Flytrap and Close Relatives Unveil the Roots of Plant Carnivory

scientific article published on 11 May 2020

HMM Logos for visualization of protein families

scientific article

Heat shock protein-90-alpha, a prolactin-STAT5 target gene identified in breast cancer cells, is involved in apoptosis regulation

scientific article

Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structures

scientific article published on November 2005

How to Grow a Tree: Plant Voltage-Dependent Cation Channels in the Spotlight of Evolution

scientific article published on 29 August 2020

ITS2 Database V: Twice as Much

scientific article published on 6 August 2015

ITS2 database IV: interactive taxon sampling for internal transcribed spacer 2 based phylogenies

scientific article published on 18 February 2012

ITS2 sequence-structure analysis in phylogenetics: a how-to manual for molecular systematics

scientific article published on August 2009

Identification of divergent WH2 motifs by HMM-HMM alignments

scientific article published on 24 January 2015

Including RNA secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees

scientific article

Initial sequencing and analysis of the human genome

scientific article published on 15 February 2001

Initial sequencing and comparative analysis of the mouse genome

scientific article

Modelling cross-hybridization on phylogenetic DNA microarrays increases the detection power of closely related species

scientific article

Modelling interaction sites in protein domains with interaction profile hidden Markov models

scientific article published on 25 September 2006

Placozoa: at least two

article by Matthias Wolf et al published 1 January 2007 in Biologia

Predicting protein cellular localization using a domain projection method

scientific article published on August 2002

Prediction of structure and functional residues for O-GlcNAcase, a divergent homologue of acetyltransferases

scientific article published in October 2002

ProfDistS: (profile-) distance based phylogeny on sequence--structure alignments

scientific article

SMART 4.0: towards genomic data integration

scientific article (publication date: 2004)

SMART 5: domains in the context of genomes and networks

scientific article

Sequence analysis of multidomain proteins: past perspectives and future directions

scientific article

Structural genomics of human proteins--target selection and generation of a public catalogue of expression clones

scientific article

Systematic identification of novel protein domain families associated with nuclear functions

scientific article

The ITS2 Database

scientific article published on 12 March 2012

The ITS2 Database II: homology modelling RNA structure for molecular systematics

scientific article published on 11 October 2007

The ITS2 Database III--sequences and structures for phylogeny

scientific article published on 17 November 2009

The Venus flytrap trigger hair-specific potassium channel KDM1 can reestablish the K+ gradient required for hapto-electric signaling

scientific article published on 09 December 2020

The bilaterian roots of cordon-bleu.

scientific article

The internal transcribed spacer 2 database--a web server for (not only) low level phylogenetic analyses

scientific article published on July 2006

The protein composition of the digestive fluid from the venus flytrap sheds light on prey digestion mechanisms

scientific article

Variation in structural location and amino acid conservation of functional sites in protein domain families

scientific article

Venus flytrap carnivorous lifestyle builds on herbivore defense strategies

scientific article (publication date: 4 May 2016)

Venus flytrap microbiotas withstand harsh conditions during prey digestion

scientific article published on 01 March 2019

proovread: large-scale high-accuracy PacBio correction through iterative short read consensus

scientific article published on 10 July 2014

reper: Genome-wide identification, classification and quantification of repetitive elements without an assembled genome

scientific article published on 08 February 2018

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