Search filters

List of works by Soo-Yon Rhee

A combined data mining approach for infrequent events: analyzing HIV mutation changes based on treatment history.

scientific article

A multifaceted analysis of HIV-1 protease multidrug resistance phenotypes

scientific article

Association of a novel human immunodeficiency virus type 1 protease substrate cleft mutation, L23I, with protease inhibitor therapy and in vitro drug resistance

scientific article published on December 2004

Biomarker discovery using targeted maximum-likelihood estimation: application to the treatment of antiretroviral-resistant HIV infection

scientific article

Comparison of the precision and sensitivity of the Antivirogram and PhenoSense HIV drug susceptibility assays

scientific article published on April 2005

Consensus drug resistance mutations for epidemiological surveillance: basic principles and potential controversies.

scientific article

Constrained patterns of covariation and clustering of HIV-1 non-nucleoside reverse transcriptase inhibitor resistance mutations

scientific article

Correction: Geographic and Temporal Trends in the Molecular Epidemiology and Genetic Mechanisms of Transmitted HIV-1 Drug Resistance: An Individual-Patient- and Sequence-Level Meta-Analysis

scientific article

Drug resistance mutations for surveillance of transmitted HIV-1 drug-resistance: 2009 update

scientific article

Estimating the individualized HIV-1 genetic barrier to resistance using a nelfinavir fitness landscape

scientific article

Evolution of gag and gp41 in Patients Receiving Ritonavir-Boosted Protease Inhibitors

scientific article published on 14 September 2017

Genetic Variability of HIV-1 for Drug Resistance Assay Development

scientific article published on 11 February 2016

Genotypic predictors of human immunodeficiency virus type 1 drug resistance

scholarly article

Geographic and temporal trends in the molecular epidemiology and genetic mechanisms of transmitted HIV-1 drug resistance: an individual-patient- and sequence-level meta-analysis

scientific article

HIV-1 Drug Resistance Mutations: Potential Applications for Point-of-Care Genotypic Resistance Testing

scientific article

HIV-1 Protease and reverse-transcriptase mutations: correlations with antiretroviral therapy in subtype B isolates and implications for drug-resistance surveillance

scientific article published on 05 July 2005

HIV-1 Protease, Reverse Transcriptase, and Integrase Variation

scientific article

HIV-1 fitness landscape models for indinavir treatment pressure using observed evolution in longitudinal sequence data are predictive for treatment failure

scientific article

HIV-1 integrase inhibitor resistance and its clinical implications

scientific article

HIV-1 pol mutation frequency by subtype and treatment experience: extension of the HIVseq program to seven non-B subtypes

scientific article published on March 2006

HIV-1 protease and reverse transcriptase mutations for drug resistance surveillance

scientific article published on January 2007

HIV-1 subtype B protease and reverse transcriptase amino acid covariation

scientific article

HIV-1 transmitted drug resistance surveillance: shifting trends in study design and prevalence estimates

scientific article published on 01 September 2020

Human immunodeficiency virus reverse transcriptase and protease sequence database

scientific article (publication date: 2003)

Impact of drug resistance-associated amino acid changes in HIV-1 subtype C on susceptibility to newer nonnucleoside reverse transcriptase inhibitors

scientific article

Knowledge integration of software for HIV drug resistance research.

scientific article published on 11 October 2007

Lack of detectable human immunodeficiency virus type 1 superinfection during 1072 person-years of observation

scientific article published on 10 July 2003

Minority variants associated with transmitted and acquired HIV-1 nonnucleoside reverse transcriptase inhibitor resistance: implications for the use of second-generation nonnucleoside reverse transcriptase inhibitors

scientific article

Moderate to high levels of pre-treatment HIV drug resistance in KwaZulu-Natal Province, South Africa

article

More effective drugs lead to harder selective sweeps in the evolution of drug resistance in HIV-1

scientific article published on 15 February 2016

Mutational Correlates of Virological Failure in Individuals Receiving a WHO-Recommended Tenofovir-Containing First-Line Regimen: An International Collaboration

scientific article published on 19 March 2017

Non-nucleoside reverse transcriptase inhibitor (NNRTI) cross-resistance: implications for preclinical evaluation of novel NNRTIs and clinical genotypic resistance testing

scientific article published on 9 August 2013

Nonpolymorphic human immunodeficiency virus type 1 protease and reverse transcriptase treatment-selected mutations.

scientific article published on 31 August 2009

Nucleoside reverse transcriptase inhibitor resistance mutations associated with first-line stavudine-containing antiretroviral therapy: programmatic implications for countries phasing out stavudine

scientific article published on June 2013

Panel of prototypical infectious molecular HIV-1 clones containing multiple nucleoside reverse transcriptase inhibitor resistance mutations

scientific article published on April 2005

Predictive value of HIV-1 genotypic resistance test interpretation algorithms

scientific article published on August 2009

Prevalence of Drug-Resistant Minority Variants in Untreated HIV-1-Infected Individuals With and Those Without Transmitted Drug Resistance Detected by Sanger Sequencing

scientific article published on August 2017

Prevalence of darunavir resistance-associated mutations: patterns of occurrence and association with past treatment

scientific article published on 10 September 2007

Protease and Reverse Transcriptase Mutation Patterns in HIV Type 1 Isolates from Heavily Treated Persons: Comparison of Isolates from Northern California with Isolates from Other Regions ⬇️

scientific article published on October 1, 2003

Response to Therapy in Antiretroviral Therapy-Naive Patients With Isolated Nonnucleoside Reverse Transcriptase Inhibitor-Associated Transmitted Drug Resistance

scientific article published on 5 February 2016

Sequencing-based detection of low-frequency human immunodeficiency virus type 1 drug-resistant mutants by an RNA/DNA heteroduplex generator-tracking assay

scientific article

Standardized Comparison of the Relative Impacts of HIV-1 Reverse Transcriptase (RT) Mutations on Nucleoside RT Inhibitor Susceptibility ⬇️

scientific article published on February 13, 2012

Standardized representation, visualization and searchable repository of antiretroviral treatment-change episodes

scientific article (publication date: 3 May 2012)

Super learning: an application to the prediction of HIV-1 drug resistance

scientific article published on 23 February 2007

Surveillance of HIV Transmitted Drug Resistance in Latin America and the Caribbean: A Systematic Review and Meta-Analysis

scientific article

The calibrated population resistance tool: standardized genotypic estimation of transmitted HIV-1 drug resistance

scientific article published on 20 March 2009

Trends in Pretreatment HIV-1 Drug Resistance in Antiretroviral Therapy-naive Adults in South Africa, 2000-2016: A Pooled Sequence Analysis

article

Viral population estimation using pyrosequencing

scientific article

Virologic efficacy of boosted double versus boosted single protease inhibitor therapy

scientific article published on July 2007

Paulina is supported by:

About Paulina

Help