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List of works by Andrew Lonie

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Whole-genome characterization of chemoresistant ovarian cancer

scientific article published in May 2015
Tracking the origins and drivers of subclonal metastatic expansion in prostate cancer.

scientific article
Epigenome-wide methylation in DNA from peripheral blood as a marker of risk for breast cancer

article
Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud

scientific article published on October 26, 2015
Cpipe: a shared variant detection pipeline designed for diagnostic settings

scientific article published on 10 July 2015
Rare mutations in RINT1 predispose carriers to breast and Lynch syndrome-spectrum cancers

scientific article
Identification of G protein-coupled receptors in Schistosoma haematobium and S. mansoni by comparative genomics

scientific article
Investigating reproducibility and tracking provenance - A genomic workflow case study

scientific article
Genome-wide measures of DNA methylation in peripheral blood and the risk of urothelial cell carcinoma: a prospective nested case-control study

scientific article published on 4 August 2016
Genome-Wide Measures of Peripheral Blood Dna Methylation and Prostate Cancer Risk in a Prospective Nested Case-Control Study

scientific article published on 24 January 2017
Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv

scientific article published on 01 November 2019
Erratum: Corrigendum: Whole–genome characterization of chemoresistant ovarian cancer

scientific article published in Nature
FAVR (Filtering and Annotation of Variants that are Rare): methods to facilitate the analysis of rare germline genetic variants from massively parallel sequencing datasets

scientific article published on 25 February 2013
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.

scientific article published on 30 June 2017
Pipeline for the identification and classification of ion channels in parasitic flatworms

scientific article published on 16 March 2016
Is RNASEL:p.Glu265* a modifier of early-onset breast cancer risk for carriers of high-risk mutations?

scientific article published on 8 February 2018
No more business as usual: Agile and effective responses to emerging pathogen threats require open data and open analytics

scientific article published on 13 August 2020
Supplementary Table 6 from The Germline and Somatic Origins of Prostate Cancer Heterogeneity

MINING SURPRISING PATTERNS AND THEIR EXPLANATIONS IN CLINICAL DATA

Supplementary Table 3 from The Germline and Somatic Origins of Prostate Cancer Heterogeneity

CloudLaunch: Discover and deploy cloud applications

Application of a bioinformatics training delivery method for reaching dispersed and distant trainees

scientific article published on 18 March 2021
Figure 7 from The Germline and Somatic Origins of Prostate Cancer Heterogeneity

Supplementary Table 4 from The Germline and Somatic Origins of Prostate Cancer Heterogeneity

Hi-Plex2: a simple and robust approach to targeted sequencing-based genetic screening

scientific article published on 03 July 2019
Freely accessible ready to use global infrastructure for SARS-CoV-2 monitoring

scientific article
A data clustering approach to discriminating impersonating devices in Wi-Fi networks

scientific article published in 2009
Digital forensic readiness: Expert perspectives on a theoretical framework

scientific article published in 2015

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