List of works - Melissa J Hubisz

A high-resolution map of human evolutionary constraint using 29 mammals

scientific article

A method for calculating probabilities of fitness consequences for point mutations across the human genome

scientific article

A model-based analysis of GC-biased gene conversion in the human and chimpanzee genomes

scientific article

A scan for positively selected genes in the genomes of humans and chimpanzees

scientific article

A simple genetic architecture underlies morphological variation in dogs

scientific article

Adaptive genic evolution in the Drosophila genomes

scholarly article

Ancient gene flow from early modern humans into Eastern Neanderthals

scientific article

Ascertainment bias in studies of human genome-wide polymorphism.

scientific article

Bayesian inference of ancient human demography from individual genome sequences

scientific article (publication date: 18 September 2011)

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution

scientific article

Darwinian and demographic forces affecting human protein coding genes

scientific article published on 11 March 2009

Demographic histories and patterns of linkage disequilibrium in Chinese and Indian rhesus macaques

scientific article

Detecting coevolving amino acid sites using Bayesian mutational mapping

scientific article published in June 2005

Detection of nonneutral substitution rates on mammalian phylogenies

scientific article published on 26 October 2009

Error and error mitigation in low-coverage genome assemblies

scientific article

Evolution of genes and genomes on the Drosophila phylogeny

scientific article

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

scientific article

Evolutionary genomics: detecting selection needs comparative data.

scientific article

Exploring the genesis and functions of Human Accelerated Regions sheds light on their role in human evolution

scientific article

Genes under positive selection in Escherichia coli.

scientific article

Genome-wide inference of ancestral recombination graphs

scientific article

Genome-wide inference of natural selection on human transcription factor binding sites

scientific article

Genomic scans for selective sweeps using SNP data

scientific article

Inference of Ancestral Recombination Graphs Using ARGweaver

scientific article published on 01 January 2020

Inferring weak population structure with the assistance of sample group information ⬇️

scientific article (publication date: September 2009)

Lineage-specific intolerance to oncogenic drivers restricts histological transformation

scientific article published on 08 February 2024

Localizing recent adaptive evolution in the human genome

scientific article

Mapping gene flow between ancient hominins through demography-aware inference of the ancestral recombination graph

scientific article published on 06 August 2020

Maximum likelihood estimation of ancestral codon usage bias parameters in Drosophila.

scientific article

PHAST and RPHAST: phylogenetic analysis with space/time models

scientific article

Parallel evolution of ancient, pleiotropic enhancers underlies butterfly wing pattern mimicry

scientific article published on 11 November 2019

Patterns of mutation and selection at synonymous sites in Drosophila.

scientific article published on 13 November 2007

Patterns of positive selection in six Mammalian genomes

scientific article

Proportionally more deleterious genetic variation in European than in African populations.

scientific article

Recent and ongoing selection in the human genome

scientific article

Reconstituting the frequency spectrum of ascertained single-nucleotide polymorphism data

scientific article

Replacing and additive horizontal gene transfer in Streptococcus

scientific article

SweepFinder2: increased sensitivity, robustness and flexibility.

scientific article published on 15 February 2016

Targets of balancing selection in the human genome

scientific article published on 27 August 2009

The role of GC-biased gene conversion in shaping the fastest evolving regions of the human genome

scientific article

Tracking genes and finding mutations: finding genes for complex traits in the domestic dog (Canis familiaris).

scientific article

List of works by Melissa J Hubisz

A high-resolution map of human evolutionary constraint using 29 mammals

A method for calculating probabilities of fitness consequences for point mutations across the human genome

A model-based analysis of GC-biased gene conversion in the human and chimpanzee genomes

A scan for positively selected genes in the genomes of humans and chimpanzees

A simple genetic architecture underlies morphological variation in dogs

Adaptive genic evolution in the Drosophila genomes

Ancient gene flow from early modern humans into Eastern Neanderthals

Ascertainment bias in studies of human genome-wide polymorphism.

Bayesian inference of ancient human demography from individual genome sequences

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution

Darwinian and demographic forces affecting human protein coding genes

Demographic histories and patterns of linkage disequilibrium in Chinese and Indian rhesus macaques

Detecting coevolving amino acid sites using Bayesian mutational mapping

Detection of nonneutral substitution rates on mammalian phylogenies

Error and error mitigation in low-coverage genome assemblies

Evolution of genes and genomes on the Drosophila phylogeny

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

Evolutionary genomics: detecting selection needs comparative data.

Exploring the genesis and functions of Human Accelerated Regions sheds light on their role in human evolution

Genes under positive selection in Escherichia coli.

Genome-wide inference of ancestral recombination graphs

Genome-wide inference of natural selection on human transcription factor binding sites

Genomic scans for selective sweeps using SNP data

Inference of Ancestral Recombination Graphs Using ARGweaver

Inferring weak population structure with the assistance of sample group information ⬇️

Lineage-specific intolerance to oncogenic drivers restricts histological transformation

Localizing recent adaptive evolution in the human genome

Mapping gene flow between ancient hominins through demography-aware inference of the ancestral recombination graph

Maximum likelihood estimation of ancestral codon usage bias parameters in Drosophila.

PHAST and RPHAST: phylogenetic analysis with space/time models

Parallel evolution of ancient, pleiotropic enhancers underlies butterfly wing pattern mimicry

Patterns of mutation and selection at synonymous sites in Drosophila.

Patterns of positive selection in six Mammalian genomes

Proportionally more deleterious genetic variation in European than in African populations.

Recent and ongoing selection in the human genome

Reconstituting the frequency spectrum of ascertained single-nucleotide polymorphism data

Replacing and additive horizontal gene transfer in Streptococcus

SweepFinder2: increased sensitivity, robustness and flexibility.

Targets of balancing selection in the human genome

The role of GC-biased gene conversion in shaping the fastest evolving regions of the human genome

Tracking genes and finding mutations: finding genes for complex traits in the domestic dog (Canis familiaris).