List of works - David L. Kirchman

A bacterium that inhibits the growth of Pfiesteria piscicida and other dinoflagellates

article

A marine virus as foe and friend

scientific article published on 01 August 2020

A meeting place of great ocean currents: shipboard observations of a convergent front at 2°N in the Pacific

article

Abundance, diversity, and activity of ammonia-oxidizing prokaryotes in the coastal Arctic ocean in summer and winter

scientific article

Abundant proteorhodopsin genes in the North Atlantic Ocean

scientific article

Active cycling of organic carbon in the central Arctic Ocean

scientific article published in Nature

Activity of abundant and rare bacteria in a coastal ocean

scientific article

Aerobic anoxygenic photosynthesis genes and operons in uncultured bacteria in the Delaware River

scientific article published in December 2005

Aerobic anoxygenic phototrophic bacteria attached to particles in turbid waters of the Delaware and Chesapeake estuaries

scientific article

Aerobic anoxygenic phototrophic bacteria in the Mid-Atlantic Bight and the North Pacific Gyre

scientific article published in January 2006

Arsenite modifies structure of soil microbial communities and arsenite oxidization potential ⬇️

scientific article published on 08 January 2013

Assimilation of polysaccharides and glucose by major bacterial groups in the Delaware Estuary

scientific article published on December 2005

Bacterial community structure of biofilms on artificial surfaces in an estuary

scientific article

Bacterial diversity in relatively pristine and anthropogenically-influenced mangrove ecosystems (Goa, India).

scientific article

Bacterial diversity of metagenomic and PCR libraries from the Delaware River

scientific article published in December 2005

Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient ⬇️

scientific article published on August 16, 2012

Bacteriochlorophyll and community structure of aerobic anoxygenic phototrophic bacteria in a particle-rich estuary

scientific article published on 25 February 2010

Biodiversity and Biogeography of the Lower Trophic Taxa of the Pacific Arctic Region: Sensitivities to Climate Change

scholarly article published 2014

Bioenergetics of photoheterotrophic bacteria in the oceans

scientific article published on 24 July 2012

Biomass production and assimilation of dissolved organic matter by SAR11 bacteria in the Northwest Atlantic Ocean

scientific article published on June 2005

Carbon Biogeochemistry of the Western Arctic: Primary Production, Carbon Export and the Controls on Ocean Acidification

Climate and Human-Driven Variability of Summer Hypoxia on a Large River-Dominated Shelf as Revealed by a Hypoxia Index

Constraining bacterial production, conversion efficiency and respiration in the Ross Sea, Antarctica, January–February, 1997

article

Contribution of SAR11 bacteria to dissolved dimethylsulfoniopropionate and amino acid uptake in the North Atlantic ocean

scientific article published on July 2004

Dead Zones

Diversity and Abundance of Uncultured Cytophaga -Like Bacteria in the Delaware Estuary ⬇️

scientific article published on November 1, 2003

Diversity and abundance of glycosyl hydrolase family 5 in the North Atlantic Ocean

scientific article published on 5 January 2008

Diversity and distribution of ecotypes of the aerobic anoxygenic phototrophy gene pufM in the Delaware estuary

scientific article

Diversity of bacterial communities and dissolved organic matter in a temperate estuary

scientific article published on 01 August 2018

Ecology of the rare microbial biosphere of the Arctic Ocean

scientific article

Effects of composition of labile organic matter on biogenic production of methane in the coastal sediments of the Arabian Sea.

scientific article

Effects of naphthalene on microbial community composition in the Delaware estuary

scientific article published on 01 April 2006

Environmental Drivers of Dissolved Organic Matter Molecular Composition in the Delaware Estuary

article

Erratum: Unique archaeal assemblages in the Arctic Ocean unveiled by massively parallel tag sequencing

scholarly article published in The ISME Journal

Geographic and phylogenetic variation in bacterial biovolume as revealed by protein and nucleic acid staining

scientific article published on 17 April 2009

Glucose fluxes and concentrations of dissolved combined neutral sugars (polysaccharides) in the Ross Sea and Polar Front Zone, Antarctica

scholarly article by Grieg Steward published in 2001

Growth Rates of Microbes in the Oceans

scientific article published on 17 July 2015

Growth activity of gammaproteobacterial subgroups in waters off the west Antarctic Peninsula in summer and fall

scientific article

Growth rates and rRNA content of four marine bacteria in pure cultures and in the Delaware estuary

scientific article published on 22 September 2015

High abundances of aerobic anoxygenic photosynthetic bacteria in the South Pacific Ocean

scientific article

High turnover rates of dissolved organic carbon during a spring phytoplankton bloom

scientific article published in Nature

Journal club. A microbial ecologist learns something new from an old-fashioned study

scientific article published in May 2009

Leucine incorporation by aerobic anoxygenic phototrophic bacteria in the Delaware estuary

scientific article published on 13 May 2014

Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters

scientific article

Light-stimulated bacterial production and amino acid assimilation by cyanobacteria and other microbes in the North Atlantic ocean

scientific article

Marine archaea take a short cut in the nitrogen cycle

scientific article

Marine microbial ecology: Life after volcanic destruction

scientific article published on 24 April 2017

Metagenomic analysis of organic matter degradation in methane-rich Arctic Ocean sediments

article

Microbial breathing lessons

scientific article published in Nature

Microbial ferrous wheel

scientific article published in Nature

Microbial growth in the polar oceans - role of temperature and potential impact of climate change

scientific article

Microbial oceanography: Killers of the winners.

scientific article

Microbial production of recalcitrant dissolved organic matter: long-term carbon storage in the global ocean.

scientific article published on 05 July 2010

Microbial proteins for organic material degradation in the deep ocean

scientific article

New light on an important microbe in the ocean

scholarly article

Patterns in Abundance, Cell Size and Pigment Content of Aerobic Anoxygenic Phototrophic Bacteria along Environmental Gradients in Northern Lakes

scientific article published on 30 April 2015

Photoheterotrophic microbes in the Arctic Ocean in summer and winter

scientific article published on 5 June 2009

Phylogenetic and functional diversity of Bacteria and Archaea in a unique stratified lagoon, the Clipperton atoll (N Pacific) ⬇️

scientific article published on January 1, 2012

Phytoplankton death in the sea

scientific article published in Nature

Picoplankton diversity in the Arctic Ocean and surrounding seas

Sequence and expression analyses of Cytophaga-like hydrolases in a Western arctic metagenomic library and the Sargasso Sea.

scientific article published in December 2005

Single-cell activity of freshwater aerobic anoxygenic phototrophic bacteria and their contribution to biomass production

scientific article published on 15 January 2016

Summer community structure of aerobic anoxygenic phototrophic bacteria in the western Arctic Ocean

scientific article published in May 2013

Summer distribution and diversity of aerobic anoxygenic phototrophic bacteria in the Mediterranean Sea in relation to environmental variables

scientific article published on 7 September 2010

Temporal study of Helicobacter pylori presence in coastal freshwater, estuary and marine waters ⬇️

scientific article published on December 17, 2010

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes

scientific article

The ecology of Cytophaga-Flavobacteria in aquatic environments

scientific article published in February 2002

The microbial carbon pump and the oceanic recalcitrant dissolved organic matter pool

article

The seasonal development of the bacterioplankton bloom in the Ross Sea, Antarctica, 1994–1997

article

The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes

scientific article published on 3 February 2010

Transcriptional Control in Marine Copiotrophic and Oligotrophic Bacteria with Streamlined Genomes

scientific article published on 29 July 2016

Unique archaeal assemblages in the Arctic Ocean unveiled by massively parallel tag sequencing

scientific article published on 26 March 2009

Uptake of dissolved organic carbon by gammaproteobacterial subgroups in coastal waters of the West Antarctic Peninsula

scientific article published on 21 March 2014

List of works by David L. Kirchman

A bacterium that inhibits the growth of Pfiesteria piscicida and other dinoflagellates

A marine virus as foe and friend

A meeting place of great ocean currents: shipboard observations of a convergent front at 2°N in the Pacific

Abundance, diversity, and activity of ammonia-oxidizing prokaryotes in the coastal Arctic ocean in summer and winter

Abundant proteorhodopsin genes in the North Atlantic Ocean

Active cycling of organic carbon in the central Arctic Ocean

Activity of abundant and rare bacteria in a coastal ocean

Aerobic anoxygenic photosynthesis genes and operons in uncultured bacteria in the Delaware River

Aerobic anoxygenic phototrophic bacteria attached to particles in turbid waters of the Delaware and Chesapeake estuaries

Aerobic anoxygenic phototrophic bacteria in the Mid-Atlantic Bight and the North Pacific Gyre

Arsenite modifies structure of soil microbial communities and arsenite oxidization potential ⬇️

Assimilation of polysaccharides and glucose by major bacterial groups in the Delaware Estuary

Bacterial community structure of biofilms on artificial surfaces in an estuary

Bacterial diversity in relatively pristine and anthropogenically-influenced mangrove ecosystems (Goa, India).

Bacterial diversity of metagenomic and PCR libraries from the Delaware River

Bacterial diversity, community structure and potential growth rates along an estuarine salinity gradient ⬇️

Bacteriochlorophyll and community structure of aerobic anoxygenic phototrophic bacteria in a particle-rich estuary

Biodiversity and Biogeography of the Lower Trophic Taxa of the Pacific Arctic Region: Sensitivities to Climate Change

Bioenergetics of photoheterotrophic bacteria in the oceans

Biomass production and assimilation of dissolved organic matter by SAR11 bacteria in the Northwest Atlantic Ocean

Carbon Biogeochemistry of the Western Arctic: Primary Production, Carbon Export and the Controls on Ocean Acidification

Climate and Human-Driven Variability of Summer Hypoxia on a Large River-Dominated Shelf as Revealed by a Hypoxia Index

Constraining bacterial production, conversion efficiency and respiration in the Ross Sea, Antarctica, January–February, 1997

Contribution of SAR11 bacteria to dissolved dimethylsulfoniopropionate and amino acid uptake in the North Atlantic ocean

Dead Zones

Diversity and Abundance of Uncultured Cytophaga -Like Bacteria in the Delaware Estuary ⬇️

Diversity and abundance of glycosyl hydrolase family 5 in the North Atlantic Ocean

Diversity and distribution of ecotypes of the aerobic anoxygenic phototrophy gene pufM in the Delaware estuary

Diversity of bacterial communities and dissolved organic matter in a temperate estuary

Ecology of the rare microbial biosphere of the Arctic Ocean

Effects of composition of labile organic matter on biogenic production of methane in the coastal sediments of the Arabian Sea.

Effects of naphthalene on microbial community composition in the Delaware estuary

Environmental Drivers of Dissolved Organic Matter Molecular Composition in the Delaware Estuary

Erratum: Unique archaeal assemblages in the Arctic Ocean unveiled by massively parallel tag sequencing

Geographic and phylogenetic variation in bacterial biovolume as revealed by protein and nucleic acid staining

Glucose fluxes and concentrations of dissolved combined neutral sugars (polysaccharides) in the Ross Sea and Polar Front Zone, Antarctica

Growth Rates of Microbes in the Oceans

Growth activity of gammaproteobacterial subgroups in waters off the west Antarctic Peninsula in summer and fall

Growth rates and rRNA content of four marine bacteria in pure cultures and in the Delaware estuary

High abundances of aerobic anoxygenic photosynthetic bacteria in the South Pacific Ocean

High turnover rates of dissolved organic carbon during a spring phytoplankton bloom

Journal club. A microbial ecologist learns something new from an old-fashioned study

Leucine incorporation by aerobic anoxygenic phototrophic bacteria in the Delaware estuary

Light-dependent growth and proteorhodopsin expression by Flavobacteria and SAR11 in experiments with Delaware coastal waters

Light-stimulated bacterial production and amino acid assimilation by cyanobacteria and other microbes in the North Atlantic ocean

Marine archaea take a short cut in the nitrogen cycle

Marine microbial ecology: Life after volcanic destruction

Metagenomic analysis of organic matter degradation in methane-rich Arctic Ocean sediments

Microbial breathing lessons

Microbial ferrous wheel

Microbial growth in the polar oceans - role of temperature and potential impact of climate change

Microbial oceanography: Killers of the winners.

Microbial production of recalcitrant dissolved organic matter: long-term carbon storage in the global ocean.

Microbial proteins for organic material degradation in the deep ocean

New light on an important microbe in the ocean

Patterns in Abundance, Cell Size and Pigment Content of Aerobic Anoxygenic Phototrophic Bacteria along Environmental Gradients in Northern Lakes

Photoheterotrophic microbes in the Arctic Ocean in summer and winter

Phylogenetic and functional diversity of Bacteria and Archaea in a unique stratified lagoon, the Clipperton atoll (N Pacific) ⬇️

Phytoplankton death in the sea

Picoplankton diversity in the Arctic Ocean and surrounding seas

Sequence and expression analyses of Cytophaga-like hydrolases in a Western arctic metagenomic library and the Sargasso Sea.

Single-cell activity of freshwater aerobic anoxygenic phototrophic bacteria and their contribution to biomass production

Summer community structure of aerobic anoxygenic phototrophic bacteria in the western Arctic Ocean

Summer distribution and diversity of aerobic anoxygenic phototrophic bacteria in the Mediterranean Sea in relation to environmental variables

Temporal study of Helicobacter pylori presence in coastal freshwater, estuary and marine waters ⬇️

The GAAS metagenomic tool and its estimations of viral and microbial average genome size in four major biomes

The ecology of Cytophaga-Flavobacteria in aquatic environments

The microbial carbon pump and the oceanic recalcitrant dissolved organic matter pool

The seasonal development of the bacterioplankton bloom in the Ross Sea, Antarctica, 1994–1997

The structure of bacterial communities in the western Arctic Ocean as revealed by pyrosequencing of 16S rRNA genes

Transcriptional Control in Marine Copiotrophic and Oligotrophic Bacteria with Streamlined Genomes

Unique archaeal assemblages in the Arctic Ocean unveiled by massively parallel tag sequencing

Uptake of dissolved organic carbon by gammaproteobacterial subgroups in coastal waters of the West Antarctic Peninsula