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List of works by Bas B Oude Munnink

A Novel Astrovirus-Like RNA Virus Detected in Human Stool

scientific article published on January 2016

A novel genus in the order Picornavirales detected in human stool

scientific article published on 8 September 2015

A64 Viral sequence classification using deep learning algorithms

scholarly article by David Nieuwenhuijse et al published 22 August 2019 in Virus Evolution

Antigenic Variation of Avian Influenza A(H5N6) Viruses, Guangdong Province, China, 2014-2018

scientific article published on 01 October 2019

Author Correction: Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands

scientific article published on 20 October 2020

Autologous antibody capture to enrich immunogenic viruses for viral discovery

scientific article

COVID-19 in health-care workers in three hospitals in the south of the Netherlands: a cross-sectional study

scientific article published on 02 July 2020

COVID-19 in healthcare workers in three hospitals in the South of the Netherlands, March 2020

scientific article published on 01 May 2020

Case report of a neonate with high viral SARSCoV-2 loads and long-term virus shedding

scientific article published on 27 October 2020

Characterization of Posa and Posa-like virus genomes in fecal samples from humans, pigs, rats, and bats collected from a single location in Vietnam

scientific article published on July 2017

Co-circulation of genetically distinct highly pathogenic avian influenza A clade 2.3.4.4 (H5N6) viruses in wild waterfowl and poultry in Europe and East Asia, 2017-18

article

Comparative pathogenesis of COVID-19, MERS, and SARS in a nonhuman primate model

scientific article published on 17 April 2020

Complete Genome Characterization of Two Wild-Type Measles Viruses from Vietnamese Infants during the 2014 Outbreak

scientific article published on 14 April 2016

Complete Genome Sequences of Six Measles Virus Strains.

scientific article

Detection of West Nile virus in a common whitethroat (Curruca communis) and Culex mosquitoes in the Netherlands, 2020

scientific article published on 01 October 2020

Erratum for Sooksawasdi Na Ayudhya et al., "Enhanced Enterovirus D68 Replication in Neuroblastoma Cells Is Associated with a Cell Culture-Adaptive Amino Acid Substitution in VP1"

scientific article published on 09 December 2020

Exploring utility of genomic epidemiology to trace origins of highly pathogenic influenza A/H7N9 in Guangdong

scientific article published on 01 July 2020

First molecular analysis of rabies virus in Qatar and clinical cases imported into Qatar, a case report

scientific article published on 03 May 2020

Full genome virus detection in fecal samples using sensitive nucleic acid preparation, deep sequencing, and a novel iterative sequence classification algorithm

scientific article

Genome Sequences of a Novel Vietnamese Bat Bunyavirus

scientific article published on 22 December 2016

Genomic monitoring to understand the emergence and spread of Usutu virus in the Netherlands, 2016-2018

scientific article published on 18 February 2020

Identification of a novel human rhinovirus C type by antibody capture VIDISCA-454.

scientific article

Influenza and other respiratory viruses involved in severe acute respiratory disease in northern Italy during the pandemic and postpandemic period (2009-2011)

scientific article

MERS-CoV in Camels but Not Camel Handlers, Sudan, 2015 and 2017

scientific article published on 01 December 2019

Metavirome Sequencing to Evaluate Norovirus Diversity in Sewage and Related Bioaccumulated Oysters

scientific article published on 17 October 2019

Monitoring SARS-CoV-2 Circulation and Diversity through Community Wastewater Sequencing, the Netherlands and Belgium

scientific article published on 01 May 2021

Occupational and environmental exposure to SARS-CoV-2 in and around infected mink farms

scientific article published on 30 July 2021

Performance of VIDISCA-454 in feces-suspensions and serum

scientific article

Persistent viremia by a novel parvovirus in a slow loris (Nycticebus coucang) with diffuse histiocytic sarcoma

scientific article published in 2014

Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets

scientific article published on 26 July 2019

Rapid SARS-CoV-2 whole genome sequencing for informed public health decision making in the Netherlands

scientific article published on 26 April 2020

Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands

scientific article published on 16 July 2020

Reduced maternal levels of common viruses during pregnancy predict offspring psychosis: potential role of enhanced maternal immune activity?

scientific article

Reinfection of SARS-CoV-2 in an immunocompromised patient: a case report

scientific article published on 09 October 2020

SARS-CoV-2 infection in farmed minks, the Netherlands, April and May 2020

scientific article published on 01 June 2020

SARS-CoV2 infection in farmed mink, Netherlands, April 2020

scientific article published on 19 May 2020

Setting a baseline for global urban virome surveillance in sewage

scientific article published on 13 August 2020

Severe acute respiratory infection caused by swine influenza virus in a child necessitating extracorporeal membrane oxygenation (ECMO), the Netherlands, October 2016.

scientific article

Tracking echovirus eleven outbreaks in Guangdong, China: a metatranscriptomic, phylogenetic, and epidemiological study

scientific article published on 01 January 2020

Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2

scientific article

Transmission of SARS-CoV-2 on mink farms between humans and mink and back to humans

scientific article

Unbiased whole-genome deep sequencing of human and porcine stool samples reveals circulation of multiple groups of rotaviruses and a putative zoonotic infection

scientific article published on July 2016

Unbiased whole-genome deep sequencing of human and porcine stool samples reveals circulation of multiple groups of rotaviruses and a putative zoonotic infection

Unexplained diarrhoea in HIV-1 infected individuals

scientific article published on 13 January 2014

Unravelling the modes of transmission of SARS-CoV-2 during a nursing home outbreak: looking beyond the church super-spread event

scientific article published on 29 October 2020

Untangling introductions and persistence in COVID-19 resurgence in Europe

scholarly article by Philippe Lemey published in 2021

Validating Whole Genome Nanopore Sequencing, using Usutu Virus as an Example

scientific article published on 11 March 2020

Virus discovery reveals frequent infection by diverse novel members of the Flaviviridae in wild lemurs

Viruses Causing Gastroenteritis: The Known, The New and Those Beyond

scientific article

Widespread activity of multiple lineages of Usutu virus, western Europe, 2016

scientific article (publication date: 26 January 2017)

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