List of works - Richard Molenkamp

A comparison of 454 sequencing and clonal sequencing for the characterization of hepatitis C virus NS3 variants

scientific article published on 26 March 2015

A rapid and convenient variant of fusion-PCR to construct chimeric flaviviruses

scientific article published on March 2003

A recombinant Yellow Fever 17D vaccine expressing Lassa virus glycoproteins

scientific article

A sensitive assay for virus discovery in respiratory clinical samples

scientific article

Alarming incidence of hepatitis C virus re-infection after treatment of sexually acquired acute hepatitis C virus infection in HIV-infected MSM.

scientific article published in November 2011

Antiviral activity of narlaprevir combined with ritonavir and pegylated interferon in chronic hepatitis C patients

scientific article published on November 2010

Assay optimization for molecular detection of Zika virus

scientific article (publication date: December 2016)

Author Correction: Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands

scientific article published on 20 October 2020

Baseline hepatitis B surface antigen (HBsAg) as predictor of sustained HBsAg loss in chronic hepatitis B patients treated with pegylated interferon-α2a and adefovir

scientific article

Bile-salt stimulated lipase polymorphisms do not associate with HCV susceptibility

scientific article published on 14 October 2019

COVID-19 in health-care workers in three hospitals in the south of the Netherlands: a cross-sectional study

scientific article published on 02 July 2020

COVID-19 in healthcare workers in three hospitals in the South of the Netherlands, March 2020

scientific article published on 01 May 2020

Characterization of Hepatitis C Virus (HCV) Envelope Diversification from Acute to Chronic Infection within a Sexually Transmitted HCV Cluster by Using Single-Molecule, Real-Time Sequencing

scientific article published on 11 January 2017

Clinical characteristics of human parechoviruses 4-6 infections in young children

scientific article published on November 2009

Comparison of commercial RT-PCR diagnostic kits for COVID-19

scientific article published on 25 April 2020

Comparison of commercial realtime reverse transcription PCR assays for the detection of SARS-CoV-2

scientific article published on 17 June 2020

Comparison of four nasal sampling methods for the detection of viral pathogens by RT-PCR-A GA(2)LEN project.

scientific article

Comparison of seven commercial RT-PCR diagnostic kits for COVID-19

scientific article published on 08 May 2020

Complete Genome Characterization of Eight Human Parainfluenza Viruses from the Netherlands

scientific article published on 11 April 2019

Conservation of the pentanucleotide motif at the top of the yellow fever virus 17D 3' stem-loop structure is not required for replication.

scientific article published on June 2007

Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance

scientific article published on 21 February 2019

Culturing of respiratory viruses in well-differentiated pseudostratified human airway epithelium as a tool to detect unknown viruses

scientific article published on 8 December 2014

DC-SIGN Polymorphisms Associated with Risk of Hepatitis C Virus Infection Among Men who Have Sex with Men but not Among Injecting Drug Users

scientific article published on 13 November 2017

Delayed Laboratory Response to COVID-19 Caused by Molecular Diagnostic Contamination

scientific article published on 20 May 2020

Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR

scholarly article by Christian Drosten published in 2020

Detection of West Nile virus in a common whitethroat (Curruca communis) and Culex mosquitoes in the Netherlands, 2020

scientific article published on 01 October 2020

Detection of human enterovirus and human parechovirus (HPeV) genotypes from clinical stool samples: polymerase chain reaction and direct molecular typing, culture characteristics, and serotyping

scientific article published on 01 October 2010

Development and evaluation of a four-tube real time multiplex PCR assay covering fourteen respiratory viruses, and comparison to its corresponding single target counterparts

scientific article published on 14 May 2011

Dynamic changes in HCV RNA levels and viral quasispecies in a patient with chronic hepatitis C after telaprevir-based treatment

scientific article published on 3 December 2011

Emergence of Hepatitis C Virus Genotype 4: Phylogenetic Analysis Reveals Three Distinct Epidemiological Profiles

scientific article (publication date: December 2009)

Erratum to: 'Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance' (J Hepatol 2019; 71(1): 14-24)

scientific article published on 01 August 2020

Evaluation of coagulation activation after rhinovirus infection in patients with asthma and healthy control subjects: an observational study.

scientific article published on 07 February 2014

Evaluation of persistence of resistant variants with ultra-deep pyrosequencing in chronic hepatitis C patients treated with telaprevir

scientific article

Exchanging the yellow fever virus envelope proteins with Modoc virus prM and E proteins results in a chimeric virus that is neuroinvasive in SCID mice

scientific article published on July 2004

Febrile neutropenia: significance of elaborated screening for respiratory viruses, and the comparison of different sampling methods, in neutropenic patients with hematological malignancies

scientific article published on 27 June 2013

Female sex and IL28B, a synergism for spontaneous viral clearance in hepatitis C virus (HCV) seroconverters from a community-based cohort

scientific article

First molecular analysis of rabies virus in Qatar and clinical cases imported into Qatar, a case report

scientific article published on 03 May 2020

Frequent HCV reinfection and superinfection in a cohort of injecting drug users in Amsterdam

scientific article published on 18 June 2009

Frequent detection of respiratory viruses without symptoms: toward defining clinically relevant cutoff values

scientific article

Genetic characterization of multiple hepatitis C virus infections following acute infection in HIV-infected men who have sex with men.

scientific article

Genomic sequence of yellow fever virus from a Dutch traveller returning from the Gambia-Senegal region, the Netherlands, November 2018

scholarly article by My Vt Phan et al published January 2019 in Eurosurveillance

HIV-1 exposure and immune activation enhance sexual transmission of Hepatitis C virus by primary Langerhans cells

article

Hepatitis C virus (HCV) antibody dynamics following acute HCV infection and reinfection among HIV-infected men who have sex with men.

scientific article published on 3 September 2014

Hepatitis C virus Broadly Neutralizing Monoclonal Antibodies Isolated 25 Years after Spontaneous Clearance

scientific article

Hepatitis E virus as a Cause of Acute Hepatitis in The Netherlands

scientific article published on 3 February 2016

High Levels of Neutrophil Extracellular Traps Persist in the Lower Respiratory Tract of Critically Ill Patients With Coronavirus Disease 2019

scholarly article

High resolution evolutionary analysis of within-host hepatitis C virus infection

High-Resolution Evolutionary Analysis of Within-Host Hepatitis C Virus Infection

scholarly article by Jayna Raghwani et al published 5 May 2019 in Journal of Infectious Diseases

Human bocavirus can be cultured in differentiated human airway epithelial cells

scientific article published on 27 May 2009

Human parechoviruses as an important viral cause of sepsislike illness and meningitis in young children

scientific article published in August 2008

Identification of a Specific Interaction between the Coronavirus Mouse Hepatitis Virus A59 Nucleocapsid Protein and Packaging Signal ⬇️

scientific article published on December 8, 1997

Identification of two Hepatitis C Virus isolates that failed genotyping by Versant LiPA 2.0 assay

scientific article published on 24 January 2009

Isolation and characterization of current human coronavirus strains in primary human epithelial cell cultures reveal differences in target cell tropism

scientific article published on 20 February 2013

Limited overlap between phylogenetic HIV and HCV clusters illustrates the dynamic sexual network structure of Dutch HIV-infected MSM.

scientific article published on 07 July 2017

Multiplex flow cytometry-based assay to study the breadth of antibody responses against E1E2 glycoproteins of hepatitis C virus

scientific article published on 27 August 2017

Neutrophil extracellular traps persist at high levels in the lower respiratory tract of critically ill COVID-19 patients

scholarly article

Origin and evolution of the unique hepatitis C virus circulating recombinant form 2k/1b

scientific article published on 23 November 2011

Peg-interferon plus nucleotide analogue treatment versus no treatment in patients with chronic hepatitis B with a low viral load: a randomised controlled, open-label trial

scientific article published on 15 May 2017

Performance Evaluation of the New Roche cobas AmpliPrep/cobas TaqMan HCV Test, Version 2.0, for Detection and Quantification of Hepatitis C Virus RNA ⬇️

scientific article published on November 14, 2012

Performance evaluation of the Panther Fusion® respiratory tract panel

scientific article published on 10 December 2019

Performance of VIDISCA-454 in feces-suspensions and serum

scientific article

Persistence of NS5B-S282T, a sofosbuvir resistance-associated substitution, in a HIV/HCV-coinfected MSM with risk of onward transmission

article

Pharmacokinetics and antiviral activity of PHX1766, a novel HCV protease inhibitor, using an accelerated Phase I study design

scientific article published on 30 November 2011

Phenotype and kinetics of SARS-CoV-2-specific T cells in COVID-19 patients with acute respiratory distress syndrome

scientific article published on 01 June 2020

Phenotype of SARS-CoV-2-specific T-cells in COVID-19 patients with acute respiratory distress syndrome

scientific article published on 18 April 2020

Preparing the outbreak assistance laboratory network in the Netherlands for the detection of the influenza virus A(H1N1) variant.

scientific article

Prevalence, determinants and genetic diversity of hepatitis C virus in the multi-ethnic population living in Suriname

scientific article

Quantitation of respiratory viruses in relation to clinical course in children with acute respiratory tract infections

scientific article published in January 2010

Rapid SARS-CoV-2 whole genome sequencing for informed public health decision making in the Netherlands

scientific article published on 26 April 2020

Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands

scientific article published on 16 July 2020

Rapid detection of human parechoviruses in clinical samples by real-time PCR

scientific article published on 01 February 2008

Real-time PCR versus viral culture on urine as a gold standard in the diagnosis of congenital cytomegalovirus infection.

scientific article published on 15 December 2011

Recommendations for the introduction of metagenomic high-throughput sequencing in clinical virology, part I: Wet lab procedure

scientific article published on 18 November 2020

Replication of not-known-vector flaviviruses in mosquito cells is restricted by intracellular host factors rather than by the viral envelope proteins

scientific article published on 10 March 2010

Resistance-associated polymorphisms in Dutch hepatitis C genotype 1a patients with and without HIV infection

Respiratory Viruses in Invasively Ventilated Critically Ill Patients-A Prospective Multicenter Observational Study

scientific article published on 6 October 2017

Risk factors for intensive care admission in children with severe acute asthma in the Netherlands: a prospective multicentre study

scientific article published on 01 July 2020

Role of the transmembrane domains of prM and E proteins in the formation of yellow fever virus envelope.

scientific article

SNP rs688 within the low-density lipoprotein receptor (LDL-R) gene associates with HCV susceptibility

scientific article published on 17 October 2018

Safety and antiviral activity of JTK-652: a novel HCV infection inhibitor

scientific article published on January 2010

Safety, tolerability, and antiviral effect of RG-101 in patients with chronic hepatitis C: a phase 1B, double-blind, randomised controlled trial

scientific article

Sewage surveillance system using urological wastewater: Key to COVID-19 monitoring?

scientific article published on 13 October 2020

Shedding of infectious virus in hospitalized patients with coronavirus disease-2019 (COVID-19): duration and key determinants

scientific article

Simultaneous detection of five different DNA targets by real-time Taqman PCR using the Roche LightCycler480: Application in viral molecular diagnostics.

scientific article published on 10 January 2007

Systemic tryptophan and kynurenine catabolite levels relate to severity of rhinovirus-induced asthma exacerbation: a prospective study with a parallel-group design

scientific article published on 23 July 2013

Temporal Kinetics of RNAemia and Associated Systemic Cytokines in Hospitalized COVID-19 Patients

scholarly article

The first complete genome sequences of clinical isolates of human coronavirus 229E

article by Seyed Mohammad Jazaeri Farsani et al published 25 August 2012 in Virus Genes

The hepatitis C virus nonstructural protein 3 Q80K polymorphism is frequently detected and transmitted among HIV-infected MSM in the Netherlands

scientific article published on January 2017

Transmission of NS5A resistance associated substitutions among men-who-have-sex-with-men recently infected with hepatitis C virus genotype 1a

scientific article published on 14 February 2020

Transmission of SARS-CoV-2 on mink farms between humans and mink and back to humans

scientific article

Travel-related acquisition of diarrhoeagenic bacteria, enteral viruses and parasites in a prospective cohort of 98 Dutch travellers

scientific article published on 22 August 2017

Treatment of acute hepatitis C virus infection in HIV-infected MSM: the effect of treatment duration

scientific article published in June 2011

Unexplained diarrhoea in HIV-1 infected individuals

scientific article published on 13 January 2014

Yellow fever virus replicons as an expression system for hepatitis C virus structural proteins

scientific article

List of works by Richard Molenkamp

A comparison of 454 sequencing and clonal sequencing for the characterization of hepatitis C virus NS3 variants

A rapid and convenient variant of fusion-PCR to construct chimeric flaviviruses

A recombinant Yellow Fever 17D vaccine expressing Lassa virus glycoproteins

A sensitive assay for virus discovery in respiratory clinical samples

Alarming incidence of hepatitis C virus re-infection after treatment of sexually acquired acute hepatitis C virus infection in HIV-infected MSM.

Antiviral activity of narlaprevir combined with ritonavir and pegylated interferon in chronic hepatitis C patients

Assay optimization for molecular detection of Zika virus

Author Correction: Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands

Baseline hepatitis B surface antigen (HBsAg) as predictor of sustained HBsAg loss in chronic hepatitis B patients treated with pegylated interferon-α2a and adefovir

Bile-salt stimulated lipase polymorphisms do not associate with HCV susceptibility

COVID-19 in health-care workers in three hospitals in the south of the Netherlands: a cross-sectional study

COVID-19 in healthcare workers in three hospitals in the South of the Netherlands, March 2020

Characterization of Hepatitis C Virus (HCV) Envelope Diversification from Acute to Chronic Infection within a Sexually Transmitted HCV Cluster by Using Single-Molecule, Real-Time Sequencing

Clinical characteristics of human parechoviruses 4-6 infections in young children

Comparison of commercial RT-PCR diagnostic kits for COVID-19

Comparison of commercial realtime reverse transcription PCR assays for the detection of SARS-CoV-2

Comparison of four nasal sampling methods for the detection of viral pathogens by RT-PCR-A GA(2)LEN project.

Comparison of seven commercial RT-PCR diagnostic kits for COVID-19

Complete Genome Characterization of Eight Human Parainfluenza Viruses from the Netherlands

Conservation of the pentanucleotide motif at the top of the yellow fever virus 17D 3' stem-loop structure is not required for replication.

Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance

Culturing of respiratory viruses in well-differentiated pseudostratified human airway epithelium as a tool to detect unknown viruses

DC-SIGN Polymorphisms Associated with Risk of Hepatitis C Virus Infection Among Men who Have Sex with Men but not Among Injecting Drug Users

Delayed Laboratory Response to COVID-19 Caused by Molecular Diagnostic Contamination

Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR

Detection of West Nile virus in a common whitethroat (Curruca communis) and Culex mosquitoes in the Netherlands, 2020

Detection of human enterovirus and human parechovirus (HPeV) genotypes from clinical stool samples: polymerase chain reaction and direct molecular typing, culture characteristics, and serotyping

Development and evaluation of a four-tube real time multiplex PCR assay covering fourteen respiratory viruses, and comparison to its corresponding single target counterparts

Dynamic changes in HCV RNA levels and viral quasispecies in a patient with chronic hepatitis C after telaprevir-based treatment

Emergence of Hepatitis C Virus Genotype 4: Phylogenetic Analysis Reveals Three Distinct Epidemiological Profiles

Erratum to: 'Cross-genotype AR3-specific neutralizing antibodies confer long-term protection in injecting drug users after HCV clearance' (J Hepatol 2019; 71(1): 14-24)

Evaluation of coagulation activation after rhinovirus infection in patients with asthma and healthy control subjects: an observational study.

Evaluation of persistence of resistant variants with ultra-deep pyrosequencing in chronic hepatitis C patients treated with telaprevir

Exchanging the yellow fever virus envelope proteins with Modoc virus prM and E proteins results in a chimeric virus that is neuroinvasive in SCID mice

Febrile neutropenia: significance of elaborated screening for respiratory viruses, and the comparison of different sampling methods, in neutropenic patients with hematological malignancies

Female sex and IL28B, a synergism for spontaneous viral clearance in hepatitis C virus (HCV) seroconverters from a community-based cohort

First molecular analysis of rabies virus in Qatar and clinical cases imported into Qatar, a case report

Frequent HCV reinfection and superinfection in a cohort of injecting drug users in Amsterdam

Frequent detection of respiratory viruses without symptoms: toward defining clinically relevant cutoff values

Genetic characterization of multiple hepatitis C virus infections following acute infection in HIV-infected men who have sex with men.

Genomic sequence of yellow fever virus from a Dutch traveller returning from the Gambia-Senegal region, the Netherlands, November 2018

HIV-1 exposure and immune activation enhance sexual transmission of Hepatitis C virus by primary Langerhans cells

Hepatitis C virus (HCV) antibody dynamics following acute HCV infection and reinfection among HIV-infected men who have sex with men.

Hepatitis C virus Broadly Neutralizing Monoclonal Antibodies Isolated 25 Years after Spontaneous Clearance

Hepatitis E virus as a Cause of Acute Hepatitis in The Netherlands

High Levels of Neutrophil Extracellular Traps Persist in the Lower Respiratory Tract of Critically Ill Patients With Coronavirus Disease 2019

High resolution evolutionary analysis of within-host hepatitis C virus infection

High-Resolution Evolutionary Analysis of Within-Host Hepatitis C Virus Infection

Human bocavirus can be cultured in differentiated human airway epithelial cells

Human parechoviruses as an important viral cause of sepsislike illness and meningitis in young children

Identification of a Specific Interaction between the Coronavirus Mouse Hepatitis Virus A59 Nucleocapsid Protein and Packaging Signal ⬇️

Identification of two Hepatitis C Virus isolates that failed genotyping by Versant LiPA 2.0 assay

Isolation and characterization of current human coronavirus strains in primary human epithelial cell cultures reveal differences in target cell tropism

Limited overlap between phylogenetic HIV and HCV clusters illustrates the dynamic sexual network structure of Dutch HIV-infected MSM.

Multiplex flow cytometry-based assay to study the breadth of antibody responses against E1E2 glycoproteins of hepatitis C virus

Neutrophil extracellular traps persist at high levels in the lower respiratory tract of critically ill COVID-19 patients

Origin and evolution of the unique hepatitis C virus circulating recombinant form 2k/1b

Peg-interferon plus nucleotide analogue treatment versus no treatment in patients with chronic hepatitis B with a low viral load: a randomised controlled, open-label trial

Performance Evaluation of the New Roche cobas AmpliPrep/cobas TaqMan HCV Test, Version 2.0, for Detection and Quantification of Hepatitis C Virus RNA ⬇️

Performance evaluation of the Panther Fusion® respiratory tract panel

Performance of VIDISCA-454 in feces-suspensions and serum

Persistence of NS5B-S282T, a sofosbuvir resistance-associated substitution, in a HIV/HCV-coinfected MSM with risk of onward transmission

Pharmacokinetics and antiviral activity of PHX1766, a novel HCV protease inhibitor, using an accelerated Phase I study design

Phenotype and kinetics of SARS-CoV-2-specific T cells in COVID-19 patients with acute respiratory distress syndrome

Phenotype of SARS-CoV-2-specific T-cells in COVID-19 patients with acute respiratory distress syndrome

Preparing the outbreak assistance laboratory network in the Netherlands for the detection of the influenza virus A(H1N1) variant.

Prevalence, determinants and genetic diversity of hepatitis C virus in the multi-ethnic population living in Suriname

Quantitation of respiratory viruses in relation to clinical course in children with acute respiratory tract infections

Rapid SARS-CoV-2 whole genome sequencing for informed public health decision making in the Netherlands

Rapid SARS-CoV-2 whole-genome sequencing and analysis for informed public health decision-making in the Netherlands

Rapid detection of human parechoviruses in clinical samples by real-time PCR

Real-time PCR versus viral culture on urine as a gold standard in the diagnosis of congenital cytomegalovirus infection.

Recommendations for the introduction of metagenomic high-throughput sequencing in clinical virology, part I: Wet lab procedure

Replication of not-known-vector flaviviruses in mosquito cells is restricted by intracellular host factors rather than by the viral envelope proteins

Resistance-associated polymorphisms in Dutch hepatitis C genotype 1a patients with and without HIV infection

Respiratory Viruses in Invasively Ventilated Critically Ill Patients-A Prospective Multicenter Observational Study

Risk factors for intensive care admission in children with severe acute asthma in the Netherlands: a prospective multicentre study

Role of the transmembrane domains of prM and E proteins in the formation of yellow fever virus envelope.

SNP rs688 within the low-density lipoprotein receptor (LDL-R) gene associates with HCV susceptibility