List of works by Alan Kuo

A comparative genomics study of 23 Aspergillus species from section Flavi

scientific article published on 27 February 2020

A parts list for fungal cellulosomes revealed by comparative genomics

scientific article published on 30 May 2017

Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs

scientific article

Characterization of four endophytic fungi as potential consolidated bioprocessing hosts for conversion of lignocellulose into advanced biofuels

scientific article published on 12 January 2017

Comparative Genomics and Transcriptomics To Analyze Fruiting Body Development in Filamentous Ascomycetes

scientific article published on 11 October 2019

Comparative Genomics of the Ectomycorrhizal Sister Species Rhizopogon vinicolor and Rhizopogon vesiculosus (Basidiomycota: Boletales) Reveals a Divergence of the Mating Type B Locus

scientific article

Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists

scientific article published on 7 January 2018

Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum

scientific article

Comparative genomics of xylose-fermenting fungi for enhanced biofuel production

scientific article

Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi.

scientific article published on 20 April 2018

Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.

scientific article

Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists

scientific article

Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle.

scientific article

Draft Genome Sequence of a Rare Smut Relative, Tilletiaria anomala UBC 951.

scientific article

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum.

scientific article

Evidence-based green algal genomics reveals marine diversity and ancestral characteristics of land plants

scientific article

Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication

scientific article

Fungal ecological strategies reflected in gene transcription - a case study of two litter decomposers

scientific article published on 08 December 2019

Genetic isolation between two recently diverged populations of a symbiotic fungus

scientific article published on 2 April 2015

Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri

scientific article

Investigation of inter- and intraspecies variation through genome sequencing of Aspergillus section Nigri

article

Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits

scientific article published on 12 October 2020

Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species ⬇️

scientific article published on 9 January 2018

Massive lateral transfer of genes encoding plant cell wall-degrading enzymes to the mycoparasitic fungus Trichoderma from its plant-associated hosts.

scientific article published on 9 April 2018

Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle

scientific article published on 12 November 2018

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

scientific article

The Phaeodactylum genome reveals the evolutionary history of diatom genomes

scientific article

The Trichoplax genome and the nature of placozoans

scientific article

The genome of Nectria haematococca: contribution of supernumerary chromosomes to gene expansion

scientific article

The genome of Xylona heveae provides a window into fungal endophytism

scientific article published on 22 October 2015

The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans

scientific article

The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation

scientific article

The genome portal of the Department of Energy Joint Genome Institute

scientific article published on 22 November 2011

Widespread adenine N6-methylation of active genes in fungi.

scientific article

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