List of works - Eri Arai

Aberrant DNA methylation results in altered gene expression in non-alcoholic steatohepatitis-related hepatocellular carcinomas

scientific article published on 19 July 2020

Ability of preoperative 3.0-Tesla magnetic resonance imaging to predict the absence of side-specific extracapsular extension of prostate cancer

scientific article published on 29 January 2013

Alterations of the spindle checkpoint pathway in clinicopathologically aggressive CpG island methylator phenotype clear cell renal cell carcinomas

scientific article published on 9 June 2015

An Integrated Prognostic Classifier for Stage I Lung Adenocarcinoma Based on mRNA, microRNA, and DNA Methylation Biomarkers

scientific article published in July 2015

Anti-SIRPα antibodies as a potential new tool for cancer immunotherapy

scientific article published on 12 January 2017

Bile acids increase levels of microRNAs 221 and 222, leading to degradation of CDX2 during esophageal carcinogenesis.

scientific article published on 8 August 2013

Carcinogenetic risk estimation based on quantification of DNA methylation levels in liver tissue at the precancerous stage

scientific article published on 9 May 2011

Clinicopathological impacts of DNA methylation alterations on pancreatic ductal adenocarcinoma: prediction of early recurrence based on genome-wide DNA methylation profiling

scientific article published on 26 February 2021

Combined functional genome survey of therapeutic targets for clear cell carcinoma of the kidney

scientific article published on 15 May 2011

Comprehensive exploration of novel chimeric transcripts in clear cell renal cell carcinomas using whole transcriptome analysis

scientific article

Cooperative participation of epigenomic and genomic alterations in the clinicopathological diversity of gastric adenocarcinomas: significance of cell adhesion and epithelial-mesenchymal transition-related signaling pathways

scientific article published on 25 July 2020

Copy number alterations in urothelial carcinomas: their clinicopathological significance and correlation with DNA methylation alterations

scientific article

DNA hypermethylation of the ZNF132 gene participates in the clinicopathological aggressiveness of "pan-negative"-type lung adenocarcinomas

scientific article published on 06 November 2020

DNA methylation profiles at precancerous stages associated with recurrence of lung adenocarcinoma

scientific article published on 27 March 2013

DNA methylation profiles in precancerous tissue and cancers: carcinogenetic risk estimation and prognostication based on DNA methylation status

scientific article published on June 2010

DNA methyltransferase 3B expression is associated with poor outcome of stage I testicular seminoma

scientific article

Diagnosis and prognostication of ductal adenocarcinomas of the pancreas based on genome-wide DNA methylation profiling by bacterial artificial chromosome array-based methylated CpG island amplification

scientific article

Epigenetic clustering of gastric carcinomas based on DNA methylation profiles at the precancerous stage: its correlation with tumor aggressiveness and patient outcome

scientific article published on 4 March 2015

Epigenetic clustering of lung adenocarcinomas based on DNA methylation profiles in adjacent lung tissue: Its correlation with smoking history and chronic obstructive pulmonary disease

scientific article

Epigenome mapping of human normal purified hepatocytes: personal epigenome variation and genome–epigenome correlation

Establishment of Patient-Derived Organoids and Drug Screening for Biliary Tract Carcinoma

scientific article published on 01 April 2019

Establishment of diagnostic criteria for upper urinary tract urothelial carcinoma based on genome-wide DNA methylation analysis

scientific article published on 04 June 2020

Establishment of permutation for cancer risk estimation in the urothelium based on genome-wide DNA methylation analysis

scientific article published on 01 November 2019

Evaluation of clinical formalin-fixed paraffin-embedded tissue quality for targeted-bisulfite sequencing

scientific article published on 17 December 2020

Feasibility of methylome analysis using small amounts of genomic DNA from formalin-fixed paraffin-embedded tissue

scientific article published on 21 September 2018

Fenton reaction induced cancer in wild type rats recapitulates genomic alterations observed in human cancer

scientific article

Genes involved in development and differentiation are commonly methylated in cancers derived from multiple organs: a single-institutional methylome analysis using 1007 tissue specimens

scientific article published on 09 January 2017

Genetic and epigenetic alterations during renal carcinogenesis.

scientific article

Genetic clustering of clear cell renal cell carcinoma based on array-comparative genomic hybridization: its association with DNA methylation alteration and patient outcome

scientific article published in September 2008

Genome-wide DNA methylation analysis during non-alcoholic steatohepatitis-related multistage hepatocarcinogenesis: comparison with hepatitis virus-related carcinogenesis

scientific article published in March 2017

Genome-wide DNA methylation profile of early-onset endometrial cancer: its correlation with genetic aberrations and comparison with late-onset endometrial cancer

scientific article published on 01 July 2019

Genome-wide DNA methylation profiles in both precancerous conditions and clear cell renal cell carcinomas are correlated with malignant potential and patient outcome

scientific article

Genome-wide DNA methylation profiles in liver tissue at the precancerous stage and in hepatocellular carcinoma.

scientific article

Genome-wide DNA methylation profiles in renal tumors of various histological subtypes and non-tumorous renal tissues.

scientific article published on 5 April 2011

Genome-wide DNA methylation profiles in urothelial carcinomas and urothelia at the precancerous stage

scientific article published on 27 August 2009

Increased expression of DNA methyltransferase 1 (DNMT1) protein in uterine cervix squamous cell carcinoma and its precursor lesion.

scientific article published on 29 December 2006

Lipidomic Signatures and Associated Transcriptomic Profiles of Clear Cell Renal Cell Carcinoma

scientific article published on 30 June 2016

Methylation pattern of urinary DNA as a marker of kidney function decline in diabetes

scientific article published on 01 September 2020

Multilayer-omics analyses of human cancers: exploration of biomarkers and drug targets based on the activities of the International Human Epigenome Consortium

scientific article published on 14 February 2014

Multilayer-omics analysis of renal cell carcinoma, including the whole exome, methylome and transcriptome

scientific article

Novel method for DNA methylation analysis using high-performance liquid chromatography and its clinical application.

scientific article published on 9 March 2018

Prognostic implication of PTPRH hypomethylation in non-small cell lung cancer.

scientific article

Prognostic risk stratification of patients with urothelial carcinoma of the bladder with recurrence after radical cystectomy.

scientific article published on 30 October 2012

Prognostication of patients with clear cell renal cell carcinomas based on quantification of DNA methylation levels of CpG island methylator phenotype marker genes

scientific article

Regional DNA hypermethylation and DNA methyltransferase (DNMT) 1 protein overexpression in both renal tumors and corresponding nontumorous renal tissues.

scientific article

Silencing of microRNA-122 is an early event during hepatocarcinogenesis from non-alcoholic steatohepatitis

scientific article published on 25 September 2014

Simple prediction model for homologous recombination deficiency in breast cancers in adolescents and young adults

scientific article published on 03 June 2020

Single-CpG-resolution methylome analysis identifies clinicopathologically aggressive CpG island methylator phenotype clear cell renal cell carcinomas

scientific article

The Japanese Society of Pathology Guidelines on the handling of pathological tissue samples for genomic research: Standard operating procedures based on empirical analyses

scientific article published in February 2018

Tumour multifocality and grade predict intravesical recurrence after nephroureterectomy in patients with upper urinary tract urothelial carcinoma without a history of bladder cancer.

scientific article published on 12 February 2015

List of works by Eri Arai

Aberrant DNA methylation results in altered gene expression in non-alcoholic steatohepatitis-related hepatocellular carcinomas

Ability of preoperative 3.0-Tesla magnetic resonance imaging to predict the absence of side-specific extracapsular extension of prostate cancer

Alterations of the spindle checkpoint pathway in clinicopathologically aggressive CpG island methylator phenotype clear cell renal cell carcinomas

An Integrated Prognostic Classifier for Stage I Lung Adenocarcinoma Based on mRNA, microRNA, and DNA Methylation Biomarkers

Anti-SIRPα antibodies as a potential new tool for cancer immunotherapy

Bile acids increase levels of microRNAs 221 and 222, leading to degradation of CDX2 during esophageal carcinogenesis.

Carcinogenetic risk estimation based on quantification of DNA methylation levels in liver tissue at the precancerous stage

Clinicopathological impacts of DNA methylation alterations on pancreatic ductal adenocarcinoma: prediction of early recurrence based on genome-wide DNA methylation profiling

Combined functional genome survey of therapeutic targets for clear cell carcinoma of the kidney

Comprehensive exploration of novel chimeric transcripts in clear cell renal cell carcinomas using whole transcriptome analysis

Cooperative participation of epigenomic and genomic alterations in the clinicopathological diversity of gastric adenocarcinomas: significance of cell adhesion and epithelial-mesenchymal transition-related signaling pathways

Copy number alterations in urothelial carcinomas: their clinicopathological significance and correlation with DNA methylation alterations

DNA hypermethylation of the ZNF132 gene participates in the clinicopathological aggressiveness of "pan-negative"-type lung adenocarcinomas

DNA methylation profiles at precancerous stages associated with recurrence of lung adenocarcinoma

DNA methylation profiles in precancerous tissue and cancers: carcinogenetic risk estimation and prognostication based on DNA methylation status

DNA methyltransferase 3B expression is associated with poor outcome of stage I testicular seminoma

Diagnosis and prognostication of ductal adenocarcinomas of the pancreas based on genome-wide DNA methylation profiling by bacterial artificial chromosome array-based methylated CpG island amplification

Epigenetic clustering of gastric carcinomas based on DNA methylation profiles at the precancerous stage: its correlation with tumor aggressiveness and patient outcome

Epigenetic clustering of lung adenocarcinomas based on DNA methylation profiles in adjacent lung tissue: Its correlation with smoking history and chronic obstructive pulmonary disease

Epigenome mapping of human normal purified hepatocytes: personal epigenome variation and genome–epigenome correlation

Establishment of Patient-Derived Organoids and Drug Screening for Biliary Tract Carcinoma

Establishment of diagnostic criteria for upper urinary tract urothelial carcinoma based on genome-wide DNA methylation analysis

Establishment of permutation for cancer risk estimation in the urothelium based on genome-wide DNA methylation analysis

Evaluation of clinical formalin-fixed paraffin-embedded tissue quality for targeted-bisulfite sequencing

Feasibility of methylome analysis using small amounts of genomic DNA from formalin-fixed paraffin-embedded tissue

Fenton reaction induced cancer in wild type rats recapitulates genomic alterations observed in human cancer

Genes involved in development and differentiation are commonly methylated in cancers derived from multiple organs: a single-institutional methylome analysis using 1007 tissue specimens

Genetic and epigenetic alterations during renal carcinogenesis.

Genetic clustering of clear cell renal cell carcinoma based on array-comparative genomic hybridization: its association with DNA methylation alteration and patient outcome

Genome-wide DNA methylation analysis during non-alcoholic steatohepatitis-related multistage hepatocarcinogenesis: comparison with hepatitis virus-related carcinogenesis

Genome-wide DNA methylation profile of early-onset endometrial cancer: its correlation with genetic aberrations and comparison with late-onset endometrial cancer

Genome-wide DNA methylation profiles in both precancerous conditions and clear cell renal cell carcinomas are correlated with malignant potential and patient outcome

Genome-wide DNA methylation profiles in liver tissue at the precancerous stage and in hepatocellular carcinoma.

Genome-wide DNA methylation profiles in renal tumors of various histological subtypes and non-tumorous renal tissues.

Genome-wide DNA methylation profiles in urothelial carcinomas and urothelia at the precancerous stage

Increased expression of DNA methyltransferase 1 (DNMT1) protein in uterine cervix squamous cell carcinoma and its precursor lesion.

Lipidomic Signatures and Associated Transcriptomic Profiles of Clear Cell Renal Cell Carcinoma

Methylation pattern of urinary DNA as a marker of kidney function decline in diabetes

Multilayer-omics analyses of human cancers: exploration of biomarkers and drug targets based on the activities of the International Human Epigenome Consortium

Multilayer-omics analysis of renal cell carcinoma, including the whole exome, methylome and transcriptome

Novel method for DNA methylation analysis using high-performance liquid chromatography and its clinical application.

Prognostic implication of PTPRH hypomethylation in non-small cell lung cancer.

Prognostic risk stratification of patients with urothelial carcinoma of the bladder with recurrence after radical cystectomy.

Prognostication of patients with clear cell renal cell carcinomas based on quantification of DNA methylation levels of CpG island methylator phenotype marker genes

Regional DNA hypermethylation and DNA methyltransferase (DNMT) 1 protein overexpression in both renal tumors and corresponding nontumorous renal tissues.

Silencing of microRNA-122 is an early event during hepatocarcinogenesis from non-alcoholic steatohepatitis

Simple prediction model for homologous recombination deficiency in breast cancers in adolescents and young adults

Single-CpG-resolution methylome analysis identifies clinicopathologically aggressive CpG island methylator phenotype clear cell renal cell carcinomas

The Japanese Society of Pathology Guidelines on the handling of pathological tissue samples for genomic research: Standard operating procedures based on empirical analyses

Tumour multifocality and grade predict intravesical recurrence after nephroureterectomy in patients with upper urinary tract urothelial carcinoma without a history of bladder cancer.