List of works - James G Omichinski

1H, 15N, and 13C resonance assignment of the 23 kDa organomercurial lyase MerB in its free and mercury-bound forms

scientific article published in July 2004

1H, 15N, and 13C resonance assignment of the amino-terminal domain of the Tfb1 subunit of yeast TFIIH

scientific article published on 01 February 2005

A conserved amphipathic helix in the N-terminal regulatory region of the papillomavirus E1 helicase is required for efficient viral DNA replication

scientific article

A stable mercury-containing complex of the organomercurial lyase MerB: catalysis, product release, and direct transfer to MerA.

scientific article

A ΩXaV motif in the Rift Valley fever virus NSs protein is essential for degrading p62, forming nuclear filaments and virulence

scientific article published on 27 April 2015

Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner

scientific article published on 23 December 2019

Affinity purification of in vitro transcribed RNA with homogeneous ends using a 3'-ARiBo tag.

scientific article published on January 2014

An experimentally tested scenario for the structural evolution of eukaryotic Cys2His2 zinc fingers from eubacterial ros homologs

scientific article published on 9 April 2013

Biochemistry. Toward methylmercury bioremediation.

scientific article published in July 2007

Characterization of a C-Terminal SUMO-Interacting Motif Present in Select PIAS-Family Proteins

scientific article published on 22 April 2020

Comparison of the specificity of interaction of cellular and viral zinc-binding domains with 2-mercaptobenzamide thioesters.

scientific article

Correction to Multiple Src Homology 3 Binding to the Ubiquitin Ligase Itch Conserved Proline-Rich Region

scholarly article published in Biochemistry

Crystal structures of the organomercurial lyase MerB in its free and mercury-bound forms: insights into the mechanism of methylmercury degradation

scientific article

Enhanced binding of RNAP II CTD phosphatase FCP1 to RAP74 following CK2 phosphorylation

scientific article

Functional and structural characterization of a dense core secretory granule sorting domain from the PC1/3 protease

scientific article

GATA-1 associates with and inhibits p53.

scientific article

High-yield production of human Dicer by transfection of human HEK293-EBNA1 cells grown in suspension

scientific article published on 06 December 2018

Identification of a non-covalent ternary complex formed by PIAS1, SUMO1, and UBC9 proteins involved in transcriptional regulation

scientific article published on 30 October 2013

Importance of the NCp7-like domain in the recognition of pre-let-7g by the pluripotency factor Lin28 ⬇️

scientific article published on October 19, 2011

Inhibition of human papillomavirus DNA replication by an E1-derived p80/UAF1-binding peptide

scientific article published on 25 January 2012

Interactions of the HIV-1 Tat and RAP74 proteins with the RNA polymerase II CTD phosphatase FCP1

scientific journal article

MNDA controls the expression of MCL-1 and BCL-2 in chronic lymphocytic leukemia cells

scientific article published on 16 July 2020

Metal-dependent Ser/Thr protein phosphatase PPM family: Evolution, structures, diseases and inhibitors

scientific article published on 07 July 2020

Molecular basis of interactions between SH3 domain-containing proteins and the proline-rich region of the ubiquitin ligase Itch

scientific article published on 24 February 2017

Monomer-to-dimer transition of Brucella suis type IV secretion system component VirB8 induces conformational changes

scientific article published on 25 February 2017

Multiple Src Homology 3 Binding to the Ubiquitin Ligase Itch Conserved Proline-Rich Region

scientific article published on 27 November 2015

NMR structural studies reveal a novel protein fold for MerB, the organomercurial lyase involved in the bacterial mercury resistance system

scientific article

NMR structure of a complex containing the TFIIF subunit RAP74 and the RNA polymerase II carboxyl-terminal domain phosphatase FCP1

scientific article

NMR structure of a complex formed by the carboxyl-terminal domain of human RAP74 and a phosphorylated peptide from the central domain of the FCP1 phosphatase

scientific article

NMR structure of the amino-terminal domain from the Tfb1 subunit of TFIIH and characterization of its phosphoinositide and VP16 binding sites

scientific article

NMR structure of the complex between the Tfb1 subunit of TFIIH and the activation domain of VP16: structural similarities between VP16 and p53

scientific article

Oligomerization enhances the binding affinity of a silver biomineralization peptide and catalyzes nanostructure formation

scientific article

Pax7 pioneer factor action requires both paired and homeo DNA binding domains

scientific article published on 01 July 2021

Preparation of λN-GST fusion protein for affinity immobilization of RNA

scientific article published on 01 January 2012

Slow conformational dynamics at the metal coordination site of a zinc finger

article

Solution structure of the carboxyl-terminal domain of RAP74 and NMR characterization of the FCP1-binding sites of RAP74 and human TFIIB

scientific article (publication date: 18 February 2003)

Spectroscopic and functional determination of the interaction of Pb2+ with GATA proteins

scientific article published in March 2005

Spectroscopic determination of the thermodynamics of cobalt and zinc binding to GATA proteins

scientific article published in July 2004

Structural and Biochemical Characterization of Organotin and Organolead Compounds Binding to the Organomercurial Lyase MerB Provide New Insights into Its Mechanism of Carbon-Metal Bond Cleavage

scientific article published on 3 January 2017

Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg-Carbon Bond Cleavage and Metal Binding Specificity

scientific article

Structural and Functional Characterization of a Complex between the Acidic Transactivation Domain of EBNA2 and the Tfb1/p62 Subunit of TFIIH

scientific article

Structural and functional characterization of an atypical activation domain in erythroid Kruppel-like factor (EKLF)

scientific article

Structural and functional characterization of interactions involving the Tfb1 subunit of TFIIH and the NER factor Rad2

scientific article

Structural and functional characterization of the phosphorylation-dependent interaction between PML and SUMO1

scientific article

Structural and functional evidence that Rad4 competes with Rad2 for binding to the Tfb1 subunit of TFIIH in NER

scientific article

Structural characterization of a noncovalent complex between ubiquitin and the transactivation domain of the erythroid-specific factor EKLF

scientific article

Structural characterization of interactions between transactivation domain 1 of the p65 subunit of NF-κB and transcription regulatory factors

scientific article

Structure of the Tfb1/p53 complex: Insights into the interaction between the p62/Tfb1 subunit of TFIIH and the activation domain of p53

scientific article published on 01 June 2006

Structure-based design of a potent artificial transactivation domain based on p53.

scientific article

Studies on the mechanism of inactivation of the HIV-1 nucleocapsid protein NCp7 with 2-mercaptobenzamide thioesters.

scientific article

The ARiBo tag: a reliable tool for affinity purification of RNAs under native conditions ⬇️

scientific article published on November 11, 2010

The Arabidopsis SUPERMAN protein is able to specifically bind DNA through its single Cys2-His2 zinc finger motif

scientific article published on November 2002

The tetramerization domain of the tree shrew p53 protein displays unique thermostability despite sharing high sequence identity with the human p53 protein

scientific article published on 02 November 2019

The type IV secretion system core component VirB8 interacts via the β1-strand with VirB10.

scientific article published on 2 August 2017

p53 and TFIIEalpha share a common binding site on the Tfb1/p62 subunit of TFIIH

scientific article

List of works by James G Omichinski

1H, 15N, and 13C resonance assignment of the 23 kDa organomercurial lyase MerB in its free and mercury-bound forms

1H, 15N, and 13C resonance assignment of the amino-terminal domain of the Tfb1 subunit of yeast TFIIH

A conserved amphipathic helix in the N-terminal regulatory region of the papillomavirus E1 helicase is required for efficient viral DNA replication

A stable mercury-containing complex of the organomercurial lyase MerB: catalysis, product release, and direct transfer to MerA.

A ΩXaV motif in the Rift Valley fever virus NSs protein is essential for degrading p62, forming nuclear filaments and virulence

Acetylation of SUMO1 Alters Interactions with the SIMs of PML and Daxx in a Protein-Specific Manner

Affinity purification of in vitro transcribed RNA with homogeneous ends using a 3'-ARiBo tag.

An experimentally tested scenario for the structural evolution of eukaryotic Cys2His2 zinc fingers from eubacterial ros homologs

Biochemistry. Toward methylmercury bioremediation.

Characterization of a C-Terminal SUMO-Interacting Motif Present in Select PIAS-Family Proteins

Comparison of the specificity of interaction of cellular and viral zinc-binding domains with 2-mercaptobenzamide thioesters.

Correction to Multiple Src Homology 3 Binding to the Ubiquitin Ligase Itch Conserved Proline-Rich Region

Crystal structures of the organomercurial lyase MerB in its free and mercury-bound forms: insights into the mechanism of methylmercury degradation

Enhanced binding of RNAP II CTD phosphatase FCP1 to RAP74 following CK2 phosphorylation

Functional and structural characterization of a dense core secretory granule sorting domain from the PC1/3 protease

GATA-1 associates with and inhibits p53.

High-yield production of human Dicer by transfection of human HEK293-EBNA1 cells grown in suspension

Identification of a non-covalent ternary complex formed by PIAS1, SUMO1, and UBC9 proteins involved in transcriptional regulation

Importance of the NCp7-like domain in the recognition of pre-let-7g by the pluripotency factor Lin28 ⬇️

Inhibition of human papillomavirus DNA replication by an E1-derived p80/UAF1-binding peptide

Interactions of the HIV-1 Tat and RAP74 proteins with the RNA polymerase II CTD phosphatase FCP1

MNDA controls the expression of MCL-1 and BCL-2 in chronic lymphocytic leukemia cells

Metal-dependent Ser/Thr protein phosphatase PPM family: Evolution, structures, diseases and inhibitors

Molecular basis of interactions between SH3 domain-containing proteins and the proline-rich region of the ubiquitin ligase Itch

Monomer-to-dimer transition of Brucella suis type IV secretion system component VirB8 induces conformational changes

Multiple Src Homology 3 Binding to the Ubiquitin Ligase Itch Conserved Proline-Rich Region

NMR structural studies reveal a novel protein fold for MerB, the organomercurial lyase involved in the bacterial mercury resistance system

NMR structure of a complex containing the TFIIF subunit RAP74 and the RNA polymerase II carboxyl-terminal domain phosphatase FCP1

NMR structure of a complex formed by the carboxyl-terminal domain of human RAP74 and a phosphorylated peptide from the central domain of the FCP1 phosphatase

NMR structure of the amino-terminal domain from the Tfb1 subunit of TFIIH and characterization of its phosphoinositide and VP16 binding sites

NMR structure of the complex between the Tfb1 subunit of TFIIH and the activation domain of VP16: structural similarities between VP16 and p53

Oligomerization enhances the binding affinity of a silver biomineralization peptide and catalyzes nanostructure formation

Pax7 pioneer factor action requires both paired and homeo DNA binding domains

Preparation of λN-GST fusion protein for affinity immobilization of RNA

Slow conformational dynamics at the metal coordination site of a zinc finger

Solution structure of the carboxyl-terminal domain of RAP74 and NMR characterization of the FCP1-binding sites of RAP74 and human TFIIB

Spectroscopic and functional determination of the interaction of Pb2+ with GATA proteins

Spectroscopic determination of the thermodynamics of cobalt and zinc binding to GATA proteins

Structural and Biochemical Characterization of Organotin and Organolead Compounds Binding to the Organomercurial Lyase MerB Provide New Insights into Its Mechanism of Carbon-Metal Bond Cleavage

Structural and Biochemical Characterization of a Copper-Binding Mutant of the Organomercurial Lyase MerB: Insight into the Key Role of the Active Site Aspartic Acid in Hg-Carbon Bond Cleavage and Metal Binding Specificity

Structural and Functional Characterization of a Complex between the Acidic Transactivation Domain of EBNA2 and the Tfb1/p62 Subunit of TFIIH

Structural and functional characterization of an atypical activation domain in erythroid Kruppel-like factor (EKLF)

Structural and functional characterization of interactions involving the Tfb1 subunit of TFIIH and the NER factor Rad2

Structural and functional characterization of the phosphorylation-dependent interaction between PML and SUMO1

Structural and functional evidence that Rad4 competes with Rad2 for binding to the Tfb1 subunit of TFIIH in NER

Structural characterization of a noncovalent complex between ubiquitin and the transactivation domain of the erythroid-specific factor EKLF

Structural characterization of interactions between transactivation domain 1 of the p65 subunit of NF-κB and transcription regulatory factors

Structure of the Tfb1/p53 complex: Insights into the interaction between the p62/Tfb1 subunit of TFIIH and the activation domain of p53

Structure-based design of a potent artificial transactivation domain based on p53.

Studies on the mechanism of inactivation of the HIV-1 nucleocapsid protein NCp7 with 2-mercaptobenzamide thioesters.

The ARiBo tag: a reliable tool for affinity purification of RNAs under native conditions ⬇️

The Arabidopsis SUPERMAN protein is able to specifically bind DNA through its single Cys2-His2 zinc finger motif

The tetramerization domain of the tree shrew p53 protein displays unique thermostability despite sharing high sequence identity with the human p53 protein

The type IV secretion system core component VirB8 interacts via the β1-strand with VirB10.

p53 and TFIIEalpha share a common binding site on the Tfb1/p62 subunit of TFIIH