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List of works by Alexandra-Chloé Villani

A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2

article published in 2021

A transcriptomic atlas of aged human microglia.

scientific article published on 7 February 2018

Aryl Hydrocarbon Receptor Controls Monocyte Differentiation into Dendritic Cells versus Macrophages

scientific article

Author Correction: Systematic comparison of single-cell and single-nucleus RNA-sequencing methods

scientific article published on 27 April 2020

Cardiotoxicity of Immune Checkpoint Inhibitors

scientific article published on 08 June 2019

Common genetic variants modulate pathogen-sensing responses in human dendritic cells

scientific article

Common variants in the NLRP3 region contribute to Crohn's disease susceptibility

scientific article published on 21 December 2008

Correction: Two distinct colonic CD14+ subsets characterized by single-cell RNA profiling in Crohn's disease

scientific article published on 01 March 2020

Corrigendum: Landscape of X chromosome inactivation across human tissues

scientific article published in Nature

Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq

scientific article published on 27 July 2020

Decoding human fetal liver haematopoiesis

scientific article published on 09 October 2019

Decreased Absolute Lymphocyte Count and Increased Neutrophil/Lymphocyte Ratio With Immune Checkpoint Inhibitor-Associated Myocarditis

scientific article published on 16 November 2020

Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma

scientific article published on 01 November 2018

Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma

scientific article published on 01 January 2019

Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq

scientific article published on April 2016

Early cross-coronavirus reactive signatures of humoral immunity against COVID-19

scientific article published on 15 October 2021

Genetic Risk Factors for Post-Infectious Irritable Bowel Syndrome Following a Waterborne Outbreak of Gastroenteritis

scientific article published on 04 January 2010

Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of transcripts under balancing selection

Genetic variation in the familial Mediterranean fever gene (MEFV) and risk for Crohn's disease and ulcerative colitis

scientific article

IL-12 and Mucosal CD14+ Monocyte-Like Cells Induce IL-8 in Colonic Memory CD4+ T Cells of Patients With Ulcerative Colitis but not Crohn's Disease

scientific article published on 01 January 2020

Identification of regulators of the innate immune response to cytosolic DNA and retroviral infection by an integrative approach

scientific article

Incidence and Clinical Features of Immune-Related Acute Kidney Injury in Patients Receiving Programmed Cell Death Ligand-1 Inhibitors

scientific article published on 21 July 2020

Induction of a regulatory myeloid program in bacterial sepsis and severe COVID-19

scientific article published on 02 September 2020

Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis

scientific article published on 01 July 2019

Landscape of X chromosome inactivation across human tissues

scientific article published on October 2017

Landscape of X chromosome inactivation across human tissues

Large-Scale Human Dendritic Cell Differentiation Revealing Notch-Dependent Lineage Bifurcation and Heterogeneity

scientific article published on 01 August 2018

Plasma proteomics reveals tissue-specific cell death and mediators of cell-cell interactions in severe COVID-19 patients

scientific article published on 03 November 2020

Poised cell circuits in human skin are activated in disease

journal article from 'bioRxiv' published in 2020

SLAMF6 deficiency augments tumor killing and skews toward an effector phenotype revealing it as a novel T cell checkpoint

scientific article published on 03 March 2020

Sex Differences in Plasmacytoid Dendritic Cell Levels of IRF5 Drive Higher IFN-α Production in Women

scientific article

Single-Cell RNA Sequencing of Human T Cells

scientific article

Single-cell RNA-seq reveals new types of human blood dendritic cells, monocytes, and progenitors

scientific article

Systematic comparison of single-cell and single-nucleus RNA-sequencing methods

scientific article published on 06 April 2020

Systems Immunology: Learning the Rules of the Immune System

scientific article published on 01 April 2018

Targeting individual cells by barcode in pooled sequence libraries

scientific article published on 01 January 2019

Targeting the CBM complex causes Treg cells to prime tumours for immune checkpoint therapy

scientific article published on 15 May 2019

The Incidence, Causes, and Risk Factors of Acute Kidney Injury in Patients Receiving Immune Checkpoint Inhibitors

scientific article published on 31 October 2019

The activation trajectory of plasmacytoid dendritic cells in vivo during a viral infection

scientific article published on 20 July 2020

The contribution of genetic studies in shifting the immunopathogenesis paradigm of Crohn's disease

scientific article published on 01 July 2009

Transcriptomic Analysis and High-dimensional Phenotypic Mapping of Mononuclear Phagocytes in Mesenteric Lymph Nodes Reveal Differences Between Ulcerative Colitis and Crohn's Disease

scientific article published on 01 March 2020

Tumor necrosis factor receptor gene polymorphisms in Crohn's disease: association with clinical phenotypes

scientific article

Two distinct colonic CD14+ subsets characterized by single-cell RNA profiling in Crohn's disease

scientific article published on 22 January 2019

Viral epitope profiling of COVID-19 patients reveals cross-reactivity and correlates of severity

scientific article

[Bacterial recognition of the intestinal microbial flora: an important risk factor for Crohn's disease]

scientific article published on 01 January 2010