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List of works by Gintaras Deikus

5' End-independent RNase J1 endonuclease cleavage of Bacillus subtilis model RNA

scientific article

A Complete Genome Screening Program of Clinical Methicillin-Resistant Staphylococcus aureus Isolates Identifies the Origin and Progression of a Neonatal Intensive Care Unit Outbreak

scientific article published on 22 November 2019

A Novel Framework for Characterizing Genomic Haplotype Diversity in the Human Immunoglobulin Heavy Chain Locus

scientific article published on 23 September 2020

A comparison of immunoglobulin IGHV, IGHD and IGHJ genes in wild-derived and classical inbred mouse strains

scientific article published on 06 October 2019

A physical and genetic map of identifies extensive rearrangement at the THC/CBD acid synthase locus

scientific article published on 08 November 2018

Adaptive gene expression in Bacillus subtilis strains deleted for tetL.

scientific article

Analysis of mRNA decay in Bacillus subtilis.

scientific article

Antagonistic roles of four SR proteins in the biosynthesis of alternatively spliced tissue factor transcripts in monocytic cells

scientific article published on 20 October 2009

Assay of Bacillus subtilis ribonucleases in vitro.

scientific article

Assembly and diploid architecture of an individual human genome via single-molecule technologies

scientific article published on 29 June 2015

Bacillus subtilis polynucleotide phosphorylase 3'-to-5' DNase activity is involved in DNA repair.

scientific article published on 11 May 2009

Bacillus subtilis trp Leader RNA: RNase J1 endonuclease cleavage specificity and PNPase processing

scientific article published on 28 July 2009

Capturing pairwise and multi-way chromosomal conformations using chromosomal walks.

scientific article published on 30 November 2016

Complete Genome Sequence of KPC-Producing Klebsiella pneumoniae Strain CAV1193.

scientific article

Constrained analysis of fluorescence anisotropy decay:application to experimental protein dynamics

scientific article

Coupling of Single Molecule, Long Read Sequencing with IMGT/HighV-QUEST Analysis Expedites Identification of SIV gp140-Specific Antibodies from scFv Phage Display Libraries

scientific article published in March 2018

Development and clinical application of an integrative genomic approach to personalized cancer therapy

scientific article published on June 2016

Elucidation of de novo small insertion/deletion biology with parent-of-origin phasing

scientific article published on 16 January 2020

Epigenetic preconditioning with decitabine sensitizes glioblastoma to temozolomide via induction of MLH1

scientific article published on 19 March 2020

Epigenomic characterization of Clostridioides difficile finds a conserved DNA methyltransferase that mediates sporulation and pathogenesis

scientific article published on 25 November 2019

Evolution of hypervirulence by a MRSA clone through acquisition of a transposable element

scientific article

Extensive sequencing of seven human genomes to characterize benchmark reference materials

scientific article

GENE-20. USE OF DECITABINE TO ALTER PATTERNS OF TREATMENT-INDUCED MUTAGENESIS IN GLIOBLASTOMA

scientific article published on 6 November 2017

Genome Plasticity of -Defective Staphylococcus aureus during Clinical Infection

scholarly article published by Deena R Altman in 2018

Genome Sequence of Bacterial Interference Strain Staphylococcus aureus 502A.

scientific article published on 10 April 2014

Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing

scientific article

Global analysis of mRNA decay intermediates in Bacillus subtilis wild-type and polynucleotide phosphorylase-deletion strains.

scientific article

HIV-1 Infection of Primary CD4+ T Cells Regulates the Expression of Specific Human Endogenous Retrovirus HERV-K (HML-2) Elements

scientific article published on 18 October 2017

HIV-1 interacts with human endogenous retrovirus K (HML-2) envelopes derived from human primary lymphocytes

scientific article

High-coverage, long-read sequencing of Han Chinese trio reference samples.

scientific article

Identification of a novel RASD1 somatic mutation in a USP8-mutated corticotroph adenoma.

scientific article

Initiation of decay of Bacillus subtilis trp leader RNA.

scientific article

Introductions and early spread of SARS-CoV-2 in the New York City area

scientific article published on 11 April 2020

Introductions and early spread of SARS-CoV-2 in the New York City area

scientific article published on 29 May 2020

Mapping and characterizing N6-methyladenine in eukaryotic genomes using single-molecule real-time sequencing

Mce3R Stress-Resistance Pathway Is Vulnerable to Small-Molecule Targeting That Improves Tuberculosis Drug Activities

scientific article published on 03 May 2019

Metagenomic binning and association of plasmids with bacterial host genomes using DNA methylation.

scientific article

Methicillin-Susceptible, Vancomycin-Resistant Staphylococcus aureus, Brazil

scientific article

Neuronal impact of patient-specific aberrant NRXN1α splicing

scientific article published on 29 November 2019

Parallel Epidemics of Community-Associated Methicillin-Resistant Staphylococcus aureus USA300 Infection in North and South America

scientific article published on 5 June 2015

Recycling of a regulatory protein by degradation of the RNA to which it binds

scholarly article

Role of Bacillus subtilis RNase J1 endonuclease and 5'-exonuclease activities in trp leader RNA turnover.

scientific article published on 29 April 2008

Single molecule-level detection and long read-based phasing of epigenetic variations in bacterial methylomes

scientific article published on 15 June 2015

Structural dynamics of the manganese-stabilizing protein-effect of pH, calcium, and manganese

scientific article

The Mce3R stress-resistance pathway is vulnerable to small-molecule targeting that improves tuberculosis drug activities

The Mce3R stress-resistance pathway is vulnerable to small-molecule targeting that improves tuberculosis drug activities

The genome of a subterrestrial nematode reveals adaptations to heat

scientific article published on 21 November 2019

Whole-genome sequencing identifies emergence of a quinolone resistance mutation in a case of Stenotrophomonas maltophilia bacteremia.

scientific article

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