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List of works by Riccardo Velasco

A PCR-based diagnostic tool for distinguishing grape skin color mutants

scientific article published in 2008

A QTL detected in an interspecific pear population confers stable fire blight resistance across different environments and genetic backgrounds

scholarly article

A SNP transferability survey within the genus Vitis

scientific article

A bulked segregant analysis tool for out-crossing species (BSATOS) and QTL-based genomics-assisted prediction of complex traits in apple

scientific article published on 26 March 2022

A candidate gene based approach validates Md-PG1 as the main responsible for a QTL impacting fruit texture in apple (Malus x domestica Borkh).

scientific article

A dense single-nucleotide polymorphism-based genetic linkage map of grapevine (Vitis vinifera L.) anchoring Pinot Noir bacterial artificial chromosome contigs

scientific article published on July 2007

A genealogy of the citrus family.

scientific article

A grapevine (Vitis vinifera L.) genetic map integrating the position of 139 expressed genes

article

A high quality draft consensus sequence of the genome of a heterozygous grapevine variety

scientific article

A high-density, multi-parental SNP genetic map on apple validates a new mapping approach for outcrossing species

scientific article

A major QTL controlling apple skin russeting maps on the linkage group 12 of 'Renetta Grigia di Torriana'.

scientific article published on 19 June 2015

A multidisciplinary approach providing new insight into fruit flesh browning physiology in apple (Malus x domestica Borkh.).

scientific article

A reference integrated map for cultivated grapevine (Vitis vinifera L.) from three crosses, based on 283 SSR and 501 SNP-based markers

scientific article published on 27 May 2008

ASSIsT: an automatic SNP scoring tool for in- and outbreeding species

scientific article published on 6 August 2015

Accuracy and responses of genomic selection on key traits in apple breeding.

scientific article

Advances in QTL mapping for ethylene production in apple (Malus×domestica Borkh.)

article

An ancient duplication of apple MYB transcription factors is responsible for novel red fruit-flesh phenotypes.

scientific article published on 24 October 2012

An evaluation of the PacBio RS platform for sequencing and de novo assembly of a chloroplast genome

scientific article

An integrated approach for increasing breeding efficiency in apple and peach in Europe

scientific article published in March 2018

Apple fruit superficial scald resistance mediated by ethylene inhibition is associated with diverse metabolic processes.

scientific article

Argot2: a large scale function prediction tool relying on semantic similarity of weighted Gene Ontology terms.

scientific article

Armillaria mellea induces a set of defense genes in grapevine roots and one of them codifies a protein with antifungal activity

scientific article published in April 2010

Assessment of apple (Malus×domestica Borkh.) fruit texture by a combined acoustic-mechanical profiling strategy

article by Fabrizio Costa et al published July 2011 in Postharvest Biology and Technology

Breeding for grapevine downy mildew resistance: a review of “omics” approaches

CRISPR-Cas9-mediated genome editing in apple and grapevine

scientific article published on 01 December 2018

Characterization of resistance gene analogues (RGAs) in apple (Malus × domestica Borkh.) and their evolutionary history of the Rosaceae family.

scientific article

Comparative analysis of rosaceous genomes and the reconstruction of a putative ancestral genome for the family.

scientific article

Comprehensive QTL mapping survey dissects the complex fruit texture physiology in apple (Malus x domestica Borkh.).

scientific article published on 25 November 2011

Construction of a high-density genetic map and detection of a major QTL of resistance to powdery mildew (Erysiphe necator Sch.) in Caucasian grapes (Vitis vinifera L.).

scientific article published on 11 November 2021

DNA-Free Genetically Edited Grapevine and Apple Protoplast Using CRISPR/Cas9 Ribonucleoproteins

scientific article published on 20 December 2016

Deconstruction of the (paleo)polyploid grapevine genome based on the analysis of transposition events involving NBS resistance genes

scientific article (publication date: 2012)

Development and mapping of SSR markers for maize.

scientific article

Development and validation of a 20K single nucleotide polymorphism (SNP) whole genome genotyping array for apple (Malus × domestica Borkh).

scientific article

Development and validation of the Axiom(®) Apple480K SNP genotyping array.

scientific article

Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array

scientific article

Dominance induction of fruitlet shedding in Malus x domestica (L. Borkh): molecular changes associated with polar auxin transport

scientific article

Downy mildew resistance induced by Trichoderma harzianum T39 in susceptible grapevines partially mimics transcriptional changes of resistant genotypes

scientific article

Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin

scientific article

Exploration of alternative splicing events in ten different grapevine cultivars

scientific article published on 17 September 2015

Fast and cost-effective genetic mapping in apple using next-generation sequencing

scientific article

Fine-Tuning Next-Generation Genome Editing Tools.

scientific article published on 7 May 2016

Gene structure and expression analysis of the drought- and abscisic acid-responsive CDeT11-24 gene family from the resurrection plant Craterostigma plantagineum Hochst ⬇️

scientific article published on April 1, 1998

Genetic analysis of metabolites in apple fruits indicates an mQTL hotspot for phenolic compounds on linkage group 16

scientific article

Genetic control of biennial bearing in apple

scientific article

Genetic mapping in the presence of genotyping errors

scientific article published on 4 February 2007

Genome mapping of postzygotic hybrid necrosis in an interspecific pear population.

scientific article

Genome-Wide Association Mapping of Flowering and Ripening Periods in Apple

scientific article

Genome-wide SNP detection, validation, and development of an 8K SNP array for apple

scientific article (publication date: 2012)

Genome-wide association study unravels the genetic control of the apple volatilome and its interplay with fruit texture.

scientific article

Genome-wide transcriptional analysis of grapevine berry ripening reveals a set of genes similarly modulated during three seasons and the occurrence of an oxidative burst at vèraison

scientific article

Genotyping-by-sequencing in an orphan plant species Physocarpus opulifolius helps identify the evolutionary origins of the genus Prunus

scientific article

Grapevine cell early activation of specific responses to DIMEB, a resveratrol elicitor

scientific article published on 6 August 2009

High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development

scientific article published on 05 June 2017

Identification of Pyrus single nucleotide polymorphisms (SNPs) and evaluation for genetic mapping in European pear and interspecific Pyrus hybrids

scientific article

Interference with ethylene perception at receptor level sheds light on auxin and transcriptional circuits associated with the climacteric ripening of apple fruit (Malus x domestica Borkh.).

scientific article published on 17 August 2016

Isolation of functional RNA from small amounts of different grape and apple tissues

scientific article published on 01 February 2004

Knockdown of MLO genes reduces susceptibility to powdery mildew in grapevine.

scientific article published on 20 April 2016

Looking forward to genetically edited fruit crops

scientific article published on 13 August 2014

Metabolite profiling of grape: Flavonols and anthocyanins

scientific article

Mitochondrial DNA of Vitis vinifera and the issue of rampant horizontal gene transfer

scientific article published on 14 October 2008

Molecular genetics and genomics of the Rosoideae: state of the art and future perspectives.

scientific article

NoPv1: a synthetic antimicrobial peptide aptamer targeting the causal agents of grapevine downy mildew and potato late blight

scientific article published on 16 October 2020

Non-GMO genetically edited crop plants

scientific article published on 12 May 2015

Ontology-oriented retrieval of putative microRNAs in Vitis vinifera via GrapeMiRNA: a web database of de novo predicted grape microRNAs

scientific article published on 29 June 2009

Physical mapping in highly heterozygous genomes: a physical contig map of the Pinot Noir grapevine cultivar

scientific article (publication date: 26 March 2010)

Pinot blanc and Pinot gris arose as independent somatic mutations of Pinot noir.

scientific article

Profiling of resveratrol oligomers, important stress metabolites, accumulating in the leaves of hybrid Vitis vinifera (Merzling × Teroldego) genotypes infected with Plasmopara viticola

scientific article

Pseudo-chromosome-length genome assembly of a double haploid "Bartlett" pear (Pyrus communis L.).

scientific article published on 01 December 2019

QTL Analysis Coupled with PTR-ToF-MS and Candidate Gene-Based Association Mapping Validate the Role of Md-AAT1 as a Major Gene in the Control of Flavor in Apple Fruit

article

R-Loci Arrangement Versus Downy and Powdery Mildew Resistance Level: A Vitis Hybrid Survey

scientific article published on 18 July 2019

Rapid annotation of anonymous sequences from genome projects using semantic similarities and a weighting scheme in gene ontology

scientific article

Regulation of flavonol content and composition in (Syrah×Pinot Noir) mature grapes: integration of transcriptional profiling and metabolic quantitative trait locus analyses.

scientific article

Resistance to Plasmopara viticola in a grapevine segregating population is associated with stilbenoid accumulation and with specific host transcriptional responses

scientific article

Ripening and genotype control stilbene accumulation in healthy grapes.

scientific article

Rpv Mediated Defense Responses in Grapevine Offspring Resistant to Plasmopara viticola

scientific article published on 22 June 2020

SNP high-throughput screening in grapevine using the SNPlex genotyping system

scientific article

Saturated linkage map construction in Rubus idaeus using genotyping by sequencing and genome-independent imputation

scientific article

Sequencing and assembly of highly heterozygous genome of Vitis vinifera L. cv Pinot Noir: problems and solutions.

scientific article published on 3 May 2008

Target metabolite and gene transcription profiling during the development of superficial scald in apple (Malus x domestica Borkh).

scientific article

The Haplotype and Stilbenoid Induction Mediate Downy Mildew Resistance in a Grapevine Interspecific Population

article by Silvia Vezzulli et al published 2019 in Frontiers in Plant Science

The SSEA server for protein secondary structure alignment.

scientific article

The draft genome sequence of European pear (Pyrus communis L. 'Bartlett')

scientific article

The genes and enzymes of the carotenoid metabolic pathway in Vitis vinifera L.

scientific article

The genome of the domesticated apple (Malus × domestica Borkh.)

scientific article

The genome of woodland strawberry (Fragaria vesca)

scientific article

The genome sequence and transcriptome of Potentilla micrantha and their comparison to Fragaria vesca (the woodland strawberry).

scientific article published in April 2018

The knock-down of the expression of MdMLO19 reduces susceptibility to powdery mildew (Podosphaera leucotricha) in apple (Malus domestica)

scientific article

The mitochondrial genome of Malus domestica and the import-driven hypothesis of mitochondrial genome expansion in seed plants

scientific article published on 14 June 2012

The peculiar landscape of repetitive sequences in the olive (Olea europaea L.) genome

scientific article

Unraveling the genetic origin of 'Glera', 'Ribolla Gialla' and other autochthonous grapevine varieties from Friuli Venezia Giulia (northeastern Italy)

scientific article published on 29 April 2020

Untargeted metabolomics investigation of volatile compounds involved in the development of apple superficial scald by PTR-ToF–MS

article

Whole genome comparisons of Fragaria, Prunus and Malus reveal different modes of evolution between Rosaceous subfamilies

scientific article

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