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List of works by Shiaoman Chao

A Consensus Map in Cultivated Hexaploid Oat Reveals Conserved Grass Synteny with Substantial Subgenome Rearrangement.

scientific article published on July 2016

A Genome-Wide Association Study of Highly Heritable Agronomic Traits in Durum Wheat

scientific article published on 17 July 2019

A Genomic Comparison of Homoeologous Recombinants of the (T4) Translocation in Wheat

article published in 2014

A High Resolution Radiation Hybrid Map of Wheat Chromosome 4A.

scientific article published on January 2016

A High-Density SNP and SSR Consensus Map Reveals Segregation Distortion Regions in Wheat

scientific article

A genome-wide association study of malting quality across eight U.S. barley breeding programs

scientific article published on 10 February 2015

A genome-wide association study of resistance to stripe rust (Puccinia striiformis f. sp. tritici) in a worldwide collection of hexaploid spring wheat (Triticum aestivum L.).

scientific article

An Improved Consensus Linkage Map of Barley Based on Flow-Sorted Chromosomes and Single Nucleotide Polymorphism Markers

article by María Muñoz-Amatriaín et al published 2011 in The plant genome

Analysis of agronomic and domestication traits in a durum × cultivated emmer wheat population using a high-density single nucleotide polymorphism-based linkage map.

scientific article published on 4 September 2014

Association mapping of leaf rust resistance loci in a spring wheat core collection

scientific article

Association mapping of spot blotch resistance in wild barley

scientific article

Characterization of Novel Gene Yr79 and Four Additional QTL for All-stage and High-temperature Adult-plant Resistance to Stripe Rust in Spring Wheat PI 182103.

scientific article

Characterization of Sr9h, a wheat stem rust resistance allele effective to Ug99.

scientific article published on 10 June 2014

Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array

scientific article

Characterization of recombinants of the Aegilops peregrina-derived Lr59 translocation of common wheat

scientific article published on 04 August 2015

Comparative DNA sequence analysis of wheat and rice genomes

scientific article

Correction to: Mapping and characterization of wheat stem rust resistance genes SrTm5 and Sr60 from Triticum monococcum

scientific article published on 01 November 2018

Correction: SNP Discovery and Chromosome Anchoring Provide the First Physically-Anchored Hexaploid Oat Map and Reveal Synteny with Model Species.

scientific article

Delimitation of wheat ph1b deletion and development of ph1b-specific DNA markers

article

Development and implementation of high-throughput SNP genotyping in barley

scientific article published on 4 December 2009

Discovery of a Novel Stem Rust Resistance Allele in Durum Wheat that Exhibits Differential Reactions to Ug99 Isolates.

scientific article published on 29 August 2017

Dissection of the multigenic wheat stem rust resistance present in the Montenegrin spring wheat accession PI 362698.

scientific article

Durum wheat genome highlights past domestication signatures and future improvement targets

scientific article published on 08 April 2019

Evaluation and Association Mapping of Resistance to Tan Spot and Stagonospora Nodorum Blotch in Adapted Winter Wheat Germplasm

scientific article published on 20 August 2015

Evaluation of Genetic Diversity and Host Resistance to Stem Rust in USDA NSGC Durum Wheat Accessions.

scientific article published in July 2017

Functional and comparative bioinformatic analysis of expressed genes from wheat spikes infected with Fusarium graminearum

scientific article

Genetic Architecture of Resistance to Stripe Rust in a Global Winter Wheat Germplasm Collection

scientific article published on 25 May 2016

Genetic Diversity among Wheat Accessions from the USDA National Small Grains Collection

Genetic Diversity and Resistance to Fusarium Head Blight in Synthetic Hexaploid Wheat Derived From and Diverse Subspecies

scientific article published on 11 December 2018

Genetic analysis and molecular mapping of crown rust resistance in common wheat

scientific article published on 4 December 2013

Genetic mapping of stem rust resistance gene Sr13 in tetraploid wheat (Triticum turgidum ssp. durum L.).

scientific article published on 21 September 2010

Genome Wide Association Study of Seedling and Adult Plant Leaf Rust Resistance in Elite Spring Wheat Breeding Lines

scientific article published on 5 February 2016

Genome mapping of kernel characteristics in hard red spring wheat breeding lines

scientific article published on 28 April 2010

Genome-Wide Association Mapping of Barley Yellow Dwarf Virus Tolerance in Spring Oat (Avena sativa L.).

scientific article

Genome-Wide Association Mapping of Leaf Rust Response in a Durum Wheat Worldwide Germplasm Collection

scientific article

Genome-Wide Association and Prediction of Grain and Semolina Quality Traits in Durum Wheat Breeding Populations

scientific article published in November 2017

Genome-wide association analysis identified SNPs closely linked to a gene resistant to Soil-borne wheat mosaic virus

scientific article published on 13 February 2014

Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars

scientific article published on 29 April 2013

Genome-wide homology analysis reveals new insights into the origin of the wheat B genome

Genomic selection for wheat traits and trait stability

scientific article

Genotype Imputation in Winter Wheat Using First-Generation Haplotype Map SNPs Improves Genome-Wide Association Mapping and Genomic Prediction of Traits

scientific article published on 09 January 2019

Haplotype based genotyping-by-sequencing in oat genome research.

scientific article published on 18 January 2018

Identification and Validation of a New Source of Low Grain Cadmium Accumulation in Durum Wheat

scientific article

Identification and molecular mapping of quantitative trait loci for Fusarium head blight resistance in emmer and durum wheat using a single nucleotide polymorphism-based linkage map

article published in 2014

Identification and molecular mapping of two QTLs with major effects for resistance to Fusarium head blight in wheat ⬇️

scientific article published on July 16, 2011

Identification and validation of SSR markers linked to the stem rust resistance gene Sr6 on the short arm of chromosome 2D in wheat

scientific article published on 05 November 2008

Identification and validation of single nucleotide polymorphic markers linked to Ug99 stem rust resistance in spring wheat

scientific article

Identification of Quantitative Resistance to and in the Soft Red Winter Wheat Cultivar ‘Jamestown’

article

Identification of a novel gene, H34, in wheat using recombinant inbred lines and single nucleotide polymorphism markers

scientific article published on 21 May 2013

Identification of markers linked to the race Ug99 effective stem rust resistance gene Sr28 in wheat (Triticum aestivum L.).

scientific article published on 15 May 2012

Identification of the VERNALIZATION 4 gene reveals the origin of spring growth habit in ancient wheats from South Asia

scientific article

Identification, introgression, and molecular marker genetic analysis and selection of a highly effective novel oat crown rust resistance from diploid oat, Avena strigosa

scientific article

Inheritance and Bulked Segregant Analysis of Leaf Rust and Stem Rust Resistance in Durum Wheat Genotypes

scientific article published on 29 September 2017

Introgression and characterization of a goatgrass gene for a high level of resistance to ug99 stem rust in tetraploid wheat. ⬇️

scientific article

Localization of the Stem Rust Resistance Gene Pg2 to Linkage Group Mrg20 in Cultivated Oat (Avena sativa)

scientific article published on 11 September 2020

Map-based analysis of the tenacious glume gene Tg-B1 of wild emmer and its role in wheat domestication.

scientific article published on 19 March 2014

Mapping a Large Number of QTL for Durable Resistance to Stripe Rust in Winter Wheat Druchamp Using SSR and SNP Markers

scientific article published on 13 May 2015

Mapping and characterization of the new adult plant leaf rust resistance gene Lr77 derived from Santa Fe winter wheat.

scientific article

Mapping and characterization of wheat stem rust resistance genes SrTm5 and Sr60 from Triticum monococcum

scientific article

Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat

scientific article published on April 2011

Mapping of Novel Leaf Rust and Stem Rust Resistance Genes in the Portuguese Durum Wheat Landrace PI 192051

scientific article published on 08 August 2019

Mapping of Yr62 and a small-effect QTL for high-temperature adult-plant resistance to stripe rust in spring wheat PI 192252

article

Mapping ofLr56translocation recombinants in wheat

Mapping quantitative trait loci conferring resistance to a widely virulent isolate of Cochliobolus sativus in wild barley accession PI 466423.

scientific article published on 17 June 2016

Marker-trait associations in Virginia Tech winter barley identified using genome-wide mapping

scientific article published on 9 November 2012

Markers Linked to Wheat Stem Rust Resistance Gene Sr11 Effective to Puccinia graminis f. sp. tritici Race TKTTF.

scientific article published on 30 June 2016

Meiotic Homoeologous Recombination-Based Alien Gene Introgression in the Genomics Era of Wheat

article

Meiotic homoeologous recombination-based mapping of wheat chromosome 2B and its homoeologues in Aegilops speltoides and Thinopyrum elongatum

scientific article published on 14 August 2018

Model SNP development for complex genomes based on hexaploid oat using high-throughput 454 sequencing technology.

scientific article

Molecular and Cytogenetic Characterization of Six Wheat- Disomic Addition Lines and Their Resistance to Rusts and Powdery Mildew

scientific article published in 2018

Molecular cytogenetic and genomic analyses reveal new insights into the origin of the wheat B genome

scientific article published in November 2017

Natural Genetic Variation Underlying Tiller Development in Barley (Hordeum vulgare L)

scientific article published on 09 April 2020

Necrotrophic effector-triggered susceptibility (NETS) underlies the barley-Pyrenophora teres f. teres interaction specific to chromosome 6H.

scientific article published on 24 August 2014

New DNA markers for high molecular weight glutenin subunits in wheat

scientific article published on 17 September 2008

Partitioning and physical mapping of wheat chromosome 3B and its homoeologue 3E in Thinopyrum elongatum by inducing homoeologous recombination

scientific article published on 22 January 2020

Population Genomics Related to Adaptation in Elite Oat Germplasm.

scientific article

Population Structure and Genotype-Phenotype Associations in a Collection of Oat Landraces and Historic Cultivars

scientific article published on 29 July 2016

Population- and genome-specific patterns of linkage disequilibrium and SNP variation in spring and winter wheat (Triticum aestivum L.).

scientific article

Precisely mapping a major gene conferring resistance to Hessian fly in bread wheat using genotyping-by-sequencing

scientific article published on 21 February 2015

Quantitative Trait Loci Mapping for Spike Characteristics in Hexaploid Wheat

scientific article published in July 2017

Quantitative Trait Loci from Two Genotypes of Oat (Avena sativa) Conditioning Resistance to Puccinia coronata.

scientific article published in February 2015

Quantitative trait loci influencing endosperm texture, dough-mixing strength, and bread-making properties of the hard red spring wheat breeding lines ⬇️

scientific article published on May 26, 2011

Reconstruction of the synthetic W7984 x Opata M85 wheat reference population

scientific article

SNP discovery and chromosome anchoring provide the first physically-anchored hexaploid oat map and reveal synteny with model species

scientific article

Sequencing of 15 622 gene-bearing BACs clarifies the gene-dense regions of the barley genome

scientific article published on 07 August 2015

Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates

scientific article

Targeted introgression of a wheat stem rust resistance gene by DNA marker-assisted chromosome engineering

scientific article published on 17 January 2011

The Hordeum Toolbox: The Barley Coordinated Agricultural Project Genotype and Phenotype Resource

article

The USDA barley core collection: genetic diversity, population structure, and potential for genome-wide association studies

scientific article

The genetic architecture of genome-wide recombination rate variation in allopolyploid wheat revealed by nested association mapping

scientific article published on 19 July 2018

The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms

scientific article

Toward a better understanding of the genomic region harboring Fusarium head blight resistance QTL Qfhs.ndsu-3AS in durum wheat

scientific article published on 18 September 2015

Transcriptome analysis of a barley breeding program examines gene expression diversity and reveals target genes for malting quality improvement ⬇️

scientific article published on November 23, 2010

Transgenerational CRISPR-Cas9 Activity Facilitates Multiplex Gene Editing in Allopolyploid Wheat

scientific article published on 01 February 2018

Use of the Illumina GoldenGate assay for single nucleotide polymorphism (SNP) genotyping in cereal crops

scientific article published on 01 January 2015

Validation and characterization of a QTL for adult plant resistance to stripe rust on wheat chromosome arm 6BS (Yr78).

scientific article published on 19 July 2017

Variation in the AvrSr35 gene determines Sr35 resistance against wheat stem rust race Ug99.

scientific article

Whole-genome QTL analysis of Stagonospora nodorum blotch resistance and validation of the SnTox4-Snn4 interaction in hexaploid wheat

scientific article published on 01 January 2012

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