List of works by Maria Chikina

31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016): part one

scientific article (publication date: November 2016)

31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016): part two: National Harbor, MD, USA. 9-13 November 2016

scientific article published oln 16 November 2016

A Temporal Switch in the Germinal Center Determines Differential Output of Memory B and Plasma Cells

scientific article

A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes.

scientific article published on 08 October 2015

Adaptive plasticity of IL-10+ and IL-35+ Treg cells cooperatively promotes tumor T cell exhaustion

scientific article published on 01 April 2019

Ancient convergent losses of Paraoxonase 1 yield potential risks for modern marine mammals

scientific article published in Science

Antibody Responses to SARS-CoV-2 Following an Outbreak Among Marine Recruits With Asymptomatic or Mild Infection

scientific article published on 09 June 2021

Assessing significance in a Markov chain without mixing

scientific article published on 28 February 2017

Causal network perturbations for instance-specific analysis of single cell and disease samples

scientific article published on 24 December 2019

CellCODE: a robust latent variable approach to differential expression analysis for heterogeneous cell populations.

scientific article published on 11 January 2015

Characterization of Gonadotrope Secretoproteome Identifies Neurosecretory Protein VGF-derived Peptide Suppression of Follicle-stimulating Hormone Gene Expression

scientific article published on 27 July 2016

Coloc-stats: a unified web interface to perform colocalization analysis of genomic features.

scientific article published in July 2018

DataRemix: a universal data transformation for optimal inference from gene expression datasets

scientific article published on 21 August 2020

Differential requirements for myeloid leukemia IFN-γ conditioning determine graft-versus-leukemia resistance and sensitivity

scientific article published on 12 June 2017

Elucidating the role of Neuropilin-1 in intra-tumoral regulatory T cell stability.

scientific article published on 4 November 2015

Evolutionary rate covariation analysis of E-cadherin identifies Raskol as a regulator of cell adhesion and actin dynamics in Drosophila

scientific article published on 14 February 2019

Germinal center B cells selectively oxidize fatty acids for energy while conducting minimal glycolysis

scientific article published on 17 February 2020

Hepatocyte-Derived Lipocalin 2 Is a Potential Serum Biomarker Reflecting Tumor Burden in Hepatoblastoma

scientific article published on 18 June 2018

Heterogeneity and clonality of kidney-infiltrating T cells in murine lupus nephritis

scientific article published on 22 April 2022

Human Dendritic Cell Response Signatures Distinguish 1918, Pandemic, and Seasonal H1N1 Influenza Viruses.

scientific article

Hundreds of Genes Experienced Convergent Shifts in Selective Pressure in Marine Mammals

scientific article published on 21 June 2016

Interferon-γ Drives Treg Fragility to Promote Anti-tumor Immunity.

scientific article published on 24 May 2017

Involvement of histone demethylase LSD1 in short-time-scale gene expression changes during cell cycle progression in embryonic stem cells

scientific article

Kidney-infiltrating T cells in murine lupus nephritis are metabolically and functionally exhausted

scientific article published on 24 September 2018

LAG3 limits regulatory T cell proliferation and function in autoimmune diabetes.

scientific article published on March 2017

Liver Is a Generative Site for the B Cell Response to Ehrlichia muris

scientific article published on 12 November 2019

Misfolded proteins inhibit proliferation and promote stress-induced death in SV40-transformed mammalian cells

scientific article

Modeling a human hepatocellular carcinoma subset in mice through coexpression of met and point-mutant β-catenin.

scientific article published on 20 April 2016

Modeling strict age-targeted mitigation strategies for COVID-19

scientific article published on 24 July 2020

Pan-mammalian analysis of molecular constraints underlying extended lifespan

scientific article published on 11 February 2020

Pathway-level information extractor (PLIER) for gene expression data

scientific article published on 27 June 2019

RERconverge: an R package for associating evolutionary rates with convergent traits

scientific article published on 01 November 2019

Remodulation of the tumor microenvironment by regulatory T cells.

scientific article published on 4 November 2015

Robust Method for Detecting Convergent Shifts in Evolutionary Rates

scientific article published on 01 August 2019

Subterranean mammals show convergent regression in ocular genes and enhancers, along with adaptation to tunneling.

scientific article published on 16 October 2017

Treg Cells Promote the SREBP1-Dependent Metabolic Fitness of Tumor-Promoting Macrophages via Repression of CD8+ T Cell-Derived Interferon-γ

scientific article published on 23 July 2019

Wnt signaling regulates hepatobiliary repair following cholestatic liver injury in mice.

scientific article published on 17 August 2016

β-catenin regulates GnRH-induced FSHβ gene expression.

scientific article published on 04 December 2012

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