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List of works by Orly Alter

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Singular value decomposition for genome-wide expression data processing and modeling

scientific article
Molecular characterisation of soft tissue tumours: a gene expression study

scientific article published in The Lancet
Generalized singular value decomposition for comparative analysis of genome-scale expression data sets of two different organisms

scientific article
Variation in gene expression patterns in follicular lymphoma and the response to rituximab

scientific article
A tensor higher-order singular value decomposition for integrative analysis of DNA microarray data from different studies

scientific article
A higher-order generalized singular value decomposition for comparison of global mRNA expression from multiple organisms

scientific article
Integrative analysis of genome-scale data by using pseudoinverse projection predicts novel correlation between DNA replication and RNA transcription

scientific article
Tensor GSVD of patient- and platform-matched tumor and normal DNA copy-number profiles uncovers chromosome arm-wide patterns of tumor-exclusive platform-consistent alterations encoding for cell transformation and predicting ovarian cancer survival

scientific article published in 2015
Global effects of DNA replication and DNA replication origin activity on eukaryotic gene expression

scientific article
GSVD comparison of patient-matched normal and tumor aCGH profiles reveals global copy-number alterations predicting glioblastoma multiforme survival

scientific article published in 2012
Reconstructing the pathways of a cellular system from genome-scale signals by using matrix and tensor computations

scientific article
Discovery of principles of nature from mathematical modeling of DNA microarray data

scientific article
Genomic signal processing: from matrix algebra to genetic networks

scientific article
Singular value decomposition of genome-scale mRNA lengths distribution reveals asymmetry in RNA gel electrophoresis band broadening

scientific article
Inhibition of the measurement of the wave function of a single quantum system in repeated weak quantum nondemolition measurements

scientific article
SVD identifies transcript length distribution functions from DNA microarray data and reveals evolutionary forces globally affecting GBM metabolism

scientific article published in 2013
Mathematically universal and biologically consistent astrocytoma genotype encodes for transformation and predicts survival phenotype

scientific article
Retrospective clinical trial experimentally validates glioblastoma genome-wide pattern of DNA copy-number alterations predictor of survival

scientific article
Novel Genome-Scale Correlation between DNA Replication and RNA Transcription During the Cell Cycle in Yeast is Predicted by Data-Driven Models

scientific report
Platform-Independent Genome-Wide Pattern of DNA Copy-Number Alterations Predicting Astrocytoma Survival and Response to Treatment Revealed by the GSVD Formulated as a Comparative Spectral Decomposition

scientific article
Quantum Measurement of a Single System

scientific book
GSVD- and tensor GSVD-uncovered patterns of DNA copy-number alterations predict adenocarcinomas survival in general and in response to platinum

scientific article
Quantum Zeno effect and the impossibility of determining the quantum state of a single system

scientific article
A Novel Higher-Order Generalized Singular Value Decomposition for Comparative Analysis of Multiple Genome-Scale Datasets

scientific report
Patterns of DNA Copy-Number Alterations Revealed by the GSVD and Tensor GSVD Encode for Cell Transformation and Predict Survival and Response to Platinum in Adenocarcinomas

scientific report
Mathematically Universal and Biologically Consistent Astrocytoma Genotype Encodes for Transformation and Predicts Survival Phenotype

scientific report
Tensor decomposition reveals concurrent evolutionary convergences and divergences and correlations with structural motifs in ribosomal RNA

scientific article
Protective measurement of the wave function of a single squeezed harmonic-oscillator state

scientific article
DNA Copy-Number Alterations in Primary Ovarian Serous Cystadenocarcinoma Encoding for Cell Transformation and Predicting Survival and Response to Platinum Therapy Throughout the Course of the Disease

scientific report
Reply to “Comment on ‘Protective measurement of the wave function of a single squeezed harmonic-oscillator state”’

scientific article published in July 1997
Singular Value Decomposition for Gene Expression Data Processing and Modeling

scientific report
Fundamental Quantum Limit to External Force Detection via Monitoring a Single Harmonic Oscillator or Free Mass

scientific article published in December 1999
Impossibility of Determining the Unknown Wavefunction of a Single Quantum System: Quantum Non-Demolition Measurements, Measurements without Entanglement and Adiabatic Measurements

scientific article published in November 1998
Can We Measure the Wave Function of a Single Wave Packet of Light?: Brownian Motion and Continuous Wave Packet Collapse in Repeated Weak Quantum Non-Demolition Measurements

scientific book chapter
Processing and Modeling Genome-Wide Expression Data Using Singular Value Decomposition

scientific book chapter
The Quantum Zeno Effect of a Single System is Equivalent to the Indetermination of the Quantum State of a Single System

scientific book chapter
Inhibition of the Measurement of the Wavefunction of a Single Quantum System and the Projection Postulate

scientific book chapter
The Unknown Wavefunction of a Single System Cannot Be Inferred Using a Series of Quantum Measurements

scientific book chapter
Quantum mechanics-based multitensor AI/ML uniquely able to discover, validate, and interpret predictors from small-cohort noisy high-dimensional multiomic data

scientific article
AI/ML-derived whole-genome predictor prospectively and clinically predicts survival and response to treatment in brain cancer

technical report
Quantum Measurement of a Single System

2001 hardcover edition (en)
Mathematical discovery and computational validation of two orthogonal mechanistically-driven whole-genome genotype–survival phenotype relationships in pediatric neuroblastoma nerve cancer

technical report

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