List of works by Orly Alter

A Novel Higher-Order Generalized Singular Value Decomposition for Comparative Analysis of Multiple Genome-Scale Datasets

scientific report

A higher-order generalized singular value decomposition for comparison of global mRNA expression from multiple organisms

scientific article

A tensor higher-order singular value decomposition for integrative analysis of DNA microarray data from different studies

scientific article

AI/ML-derived whole-genome predictor prospectively and clinically predicts survival and response to treatment in brain cancer

technical report

Can We Measure the Wave Function of a Single Wave Packet of Light?: Brownian Motion and Continuous Wave Packet Collapse in Repeated Weak Quantum Non-Demolition Measurements

scientific book chapter

DNA Copy-Number Alterations in Primary Ovarian Serous Cystadenocarcinoma Encoding for Cell Transformation and Predicting Survival and Response to Platinum Therapy Throughout the Course of the Disease

scientific report

Discovery of principles of nature from mathematical modeling of DNA microarray data

scientific article

Fundamental Quantum Limit to External Force Detection via Monitoring a Single Harmonic Oscillator or Free Mass

scientific article published in December 1999

GSVD comparison of patient-matched normal and tumor aCGH profiles reveals global copy-number alterations predicting glioblastoma multiforme survival

scientific article published in 2012

GSVD- and tensor GSVD-uncovered patterns of DNA copy-number alterations predict adenocarcinomas survival in general and in response to platinum

scientific article

Generalized singular value decomposition for comparative analysis of genome-scale expression data sets of two different organisms

scientific article

Genomic signal processing: from matrix algebra to genetic networks

scientific article

Global effects of DNA replication and DNA replication origin activity on eukaryotic gene expression

scientific article

Impossibility of Determining the Unknown Wavefunction of a Single Quantum System: Quantum Non-Demolition Measurements, Measurements without Entanglement and Adiabatic Measurements

scientific article published in November 1998

Inhibition of the Measurement of the Wavefunction of a Single Quantum System and the Projection Postulate

scientific book chapter

Inhibition of the measurement of the wave function of a single quantum system in repeated weak quantum nondemolition measurements

scientific article

Integrative analysis of genome-scale data by using pseudoinverse projection predicts novel correlation between DNA replication and RNA transcription

scientific article

Mathematical discovery and computational validation of two orthogonal mechanistically-driven whole-genome genotype–survival phenotype relationships in pediatric neuroblastoma nerve cancer

technical report

Mathematically Universal and Biologically Consistent Astrocytoma Genotype Encodes for Transformation and Predicts Survival Phenotype

scientific report

Mathematically universal and biologically consistent astrocytoma genotype encodes for transformation and predicts survival phenotype

scientific article

Molecular characterisation of soft tissue tumours: a gene expression study

scientific article published in The Lancet

Novel Genome-Scale Correlation between DNA Replication and RNA Transcription During the Cell Cycle in Yeast is Predicted by Data-Driven Models

scientific report

Patterns of DNA Copy-Number Alterations Revealed by the GSVD and Tensor GSVD Encode for Cell Transformation and Predict Survival and Response to Platinum in Adenocarcinomas

scientific report

Platform-Independent Genome-Wide Pattern of DNA Copy-Number Alterations Predicting Astrocytoma Survival and Response to Treatment Revealed by the GSVD Formulated as a Comparative Spectral Decomposition

scientific article

Processing and Modeling Genome-Wide Expression Data Using Singular Value Decomposition

scientific book chapter

Protective measurement of the wave function of a single squeezed harmonic-oscillator state

scientific article

Quantum Measurement of a Single System

scientific book

Quantum Zeno effect and the impossibility of determining the quantum state of a single system

scientific article

Reconstructing the pathways of a cellular system from genome-scale signals by using matrix and tensor computations

scientific article

Reply to “Comment on ‘Protective measurement of the wave function of a single squeezed harmonic-oscillator state”’

scientific article published in July 1997

Retrospective clinical trial experimentally validates glioblastoma genome-wide pattern of DNA copy-number alterations predictor of survival

scientific article

SVD identifies transcript length distribution functions from DNA microarray data and reveals evolutionary forces globally affecting GBM metabolism

scientific article published in 2013

Singular Value Decomposition for Gene Expression Data Processing and Modeling

scientific report

Singular value decomposition for genome-wide expression data processing and modeling

scientific article

Singular value decomposition of genome-scale mRNA lengths distribution reveals asymmetry in RNA gel electrophoresis band broadening

scientific article

Tensor GSVD of patient- and platform-matched tumor and normal DNA copy-number profiles uncovers chromosome arm-wide patterns of tumor-exclusive platform-consistent alterations encoding for cell transformation and predicting ovarian cancer survival

scientific article published in 2015

Tensor decomposition reveals concurrent evolutionary convergences and divergences and correlations with structural motifs in ribosomal RNA

scientific article

The Quantum Zeno Effect of a Single System is Equivalent to the Indetermination of the Quantum State of a Single System

scientific book chapter

The Unknown Wavefunction of a Single System Cannot Be Inferred Using a Series of Quantum Measurements

scientific book chapter

Variation in gene expression patterns in follicular lymphoma and the response to rituximab

scientific article

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