List of works by Eugene Myers

A 3D digital atlas of C. elegans and its application to single-cell analyses

scientific article

A GAL4-driver line resource for Drosophila neurobiology

scientific article

A Gene Map of the Human Genome

scientific article

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.

scientific article

A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome

scientific article

A fast bit-vector algorithm for approximate string matching based on dynamic programming

scientific article (publication date: May 1999)

A file comparison program

A highly contiguous genome assembly of the bat hawkmoth Hyles vespertilio (Lepidoptera: Sphingidae)

scientific article published on 01 January 2020

A meta-analysis to determine the oncological implications of conversion in laparoscopic colorectal cancer surgery

scientific article published on June 2015

A motif-based framework for recognizing sequence families

scientific article published on June 2005

A platform for brain-wide imaging and reconstruction of individual neurons

scientific article published on 20 January 2016

A positive role for PEA3 in HER2-mediated breast tumour progression

scientific article published on 24 October 2006

A preliminary comparison of the mouse and human genomes

A table-driven, full-sensitivity similarity search algorithm

scientific article published in January 2003

A tunable refractive index matching medium for live imaging cells, tissues and model organisms.

scientific article published on 14 July 2017

APBC 2010. The Eighth Asia Pacific Bioinformatics Conference Bangalore, India, 18-21 January 2010.

scientific article

Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome

scientific article published on 12 August 2019

Active graph matching for automatic joint segmentation and annotation of C. elegans

scientific article published on 01 January 2014

Adaptive light-sheet microscopy for long-term, high-resolution imaging in living organisms

scientific article

Analysis of cell fate from single-cell gene expression profiles in C. elegans

scientific article

Anisotropic path searching for automatic neuron reconstruction.

scientific article

Apoptosis in normal and Coxiella burnetii-infected placentas from Alaskan northern fur seals (Callorhinus ursinus).

scientific article published on 2 November 2012

Atlas-builder software and the eNeuro atlas: resources for developmental biology and neuroscience

scientific article

Author Correction: The axolotl genome and the evolution of key tissue formation regulators

scientific article published in Nature

Automated detection and quantification of single RNAs at cellular resolution in zebrafish embryos

scientific article published on 23 December 2015

Automated reconstruction of neuronal morphology based on local geometrical and global structural models

scientific article

Automated tracking and analysis of centrosomes in early Caenorhabditis elegans embryos

scientific article

Automated tracking of whiskers in videos of head fixed rodents

scientific article

Automatic Neuron Tracing in Volumetric Microscopy Images with Anisotropic Path Searching ⬇️

scientific article published on 01 January 2010

Automatic image analysis for gene expression patterns of fly embryos

scientific article

BLAST algorithm

algorithm in bioinformatics that finds regions of local similarity between molecular sequences

Basic local alignment search tool

scientific article

Bat Biology, Genomes, and the Bat1K Project: To Generate Chromosome-Level Genomes for all Living Bat Species

scientific article

Beware the contracted gallbladder - Ultrasonic predictors of conversion

scientific article published in January 2013

Biobeam-Multiplexed wave-optical simulations of light-sheet microscopy.

scientific article

Bioinformatics and genome analysis. Preface

scientific article published on 01 January 2002

BlastNeuron for Automated Comparison, Retrieval and Clustering of 3D Neuron Morphologies

scientific article

BrainAligner: 3D registration atlases of Drosophila brains

scientific article

CLIJ: GPU-accelerated image processing for everyone

scientific article published on 01 January 2020

Cell dynamics underlying oriented growth of the Drosophila wing imaginal disc

scientific article

ClearVolume: open-source live 3D visualization for light-sheet microscopy

2015 scientific article

Content-aware image restoration: pushing the limits of fluorescence microscopy

scientific article published on 26 November 2018

Contrasting signatures of genomic divergence during sympatric speciation

scientific article published on 28 October 2020

Cyclovergence: The motor response to cyclodisparity ⬇️

scientific article published on March 5, 1979

Differential lateral and basal tension drive folding of Drosophila wing discs through two distinct mechanisms

scientific article published in Nature Communications

Divergent sensory and immune gene evolution in sea turtles with contrasting demographic and life histories

scientific article published in 2023

Effects of abdominal fat distribution parameters on severity of acute pancreatitis

scientific article published on July 2012

Efficient Bayesian-based multiview deconvolution

scientific article

Efficient q-gram filters for finding all epsilon-matches over a given length

scientific article

End-of-study safety, immunogenicity, and efficacy of quadrivalent HPV (types 6, 11, 16, 18) recombinant vaccine in adult women 24-45 years of age.

scientific article

Evaluation of cervical cytology

scientific article

Evolution of genes and genomes on the Drosophila phylogeny

scientific article

Expression of SRC-1, AIB1, and PEA3 in HER2 mediated endocrine resistant breast cancer; a predictive role for SRC-1.

scientific article published on October 2004

Fast and robust optical flow for time-lapse microscopy using super-voxels

scientific article

Fast, accurate reconstruction of cell lineages from large-scale fluorescence microscopy data

scientific article

Finding Long Tandem Repeats In Long Noisy Reads

scientific article published on 08 October 2020

Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence

scientific article

Genome sequencing in microfabricated high-density picolitre reactors

scientific article

Heterochromatic sequences in a Drosophila whole-genome shotgun assembly

scientific article

Highly-accurate long-read sequencing improves variant detection and assembly of a human genome: Supplementary Material

article

ISMB/ECCB 2009 Stockholm

scientific article published on 14 May 2009

Improved repeat identification and masking in Dipterans

scientific article

Interpreting anonymous DNA samples from mass disasters--probabilistic forensic inference using genetic markers

scientific article published on July 2006

Inverse relationship between ER-beta and SRC-1 predicts outcome in endocrine-resistant breast cancer

scientific article published on November 2004

Limiting amounts of centrosome material set centrosome size in C. elegans embryos

scientific article published on 28 July 2011

Monitoring single-cell gene regulation under dynamically controllable conditions with integrated microfluidics and software

scientific article published on 15 January 2018

Multi-scale coordination of planar cell polarity in planarians

Novel cationic trypsinogen (PRSS1) N29T and R122C mutations cause autosomal dominant hereditary pancreatitis

scientific article

Nuclear accessibility of β-actin mRNA is measured by 3D single-molecule real-time tracking

scientific article

On the sequencing and assembly of the human genome

scientific article

Optimal Joint Segmentation and Tracking of Escherichia Coli in the Mother Machine

article

Optimal alignments in linear space

scientific article published in 1988

PILER: identification and classification of genomic repeats

scientific article

Persistent perforation in non-faeculant diverticular peritonitis--incidence and clinical significance

scientific article published on 26 September 2012

Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans

scientific article

Practical sensorless aberration estimation for 3D microscopy with deep learning

scientific article published on 01 September 2020

PreMosa: Extracting 2D surfaces from 3D microscopy mosaics

scientific article

Proof-editing is the bottleneck of 3D neuron reconstruction: the problem and solutions.

scientific article published in September 2011

Rapid and ongoing evolution of repetitive sequence structures in human centromeres

scientific article published on 11 December 2020

Reconstruction of the cervical esophagus: free jejunal transfer versus gastric pull-up.

scientific article published on January 1990

Revisiting Crouzon syndrome: reviewing the background and management of a multifaceted disease

scientific article published on 24 September 2014

Rod nuclear architecture determines contrast transmission of the retina and behavioral sensitivity in mice

scientific article published on 11 December 2019

Segmentation of center brains and optic lobes in 3D confocal images of adult fruit fly brains

scientific article

Simultaneous recognition and segmentation of cells: application in C.elegans

scientific article

Six reference-quality genomes reveal evolution of bat adaptations

scientific article published on 22 July 2020

Standards recommendations for the Earth BioGenome Project

scientific article published on 18 January 2022

Straightening Caenorhabditis elegans images

scientific article published on 19 November 2007

Study design and baseline description of the BMI2 trial: reducing paediatric obesity in primary care practices

scientific article

Suffix Arrays: A New Method for On-Line String Searches

article

Thalamocortical input onto layer 5 pyramidal neurons measured using quantitative large-scale array tomography

scientific article

The Genome Sequence of the Malaria Mosquito Anopheles gambiae

scientific article

The axolotl genome and the evolution of key tissue formation regulators

scientific article

The balance of prickle/spiny-legs isoforms controls the amount of coupling between core and fat PCP systems

scientific article published on 4 September 2014

The fragment assembly string graph

scientific article published on September 2005

The genome of Schmidtea mediterranea and the evolution of core cellular mechanisms

scientific article published on 24 January 2018

The genome of the tegu lizard Salvator merianae: combining Illumina, PacBio, and optical mapping data to generate a highly contiguous assembly

article

The impact of evolving management strategies on negative appendicectomy rate

scientific article published on August 2010

The independence of our genome assemblies

scholarly article

The mechanical variables underlying object localization along the axis of the whisker

scientific article published on April 2013

The modified Nyhus-Condon femoral hernia repair

scientific article published on 05 January 2010

The significance of immunohistochemistry positivity in sentinel nodes which are negative on haematoxylin and eosin in breast cancer.

scientific article published on 3 June 2009

Towards complete and error-free genome assemblies of all vertebrate species

scientific article

Tracking the in vivo evolution of multidrug resistance in Staphylococcus aureus by whole-genome sequencing

scholarly article

Uncertainty-Driven Forest Predictors for Vertebra Localization and Segmentation

article

Unsupervised segmentation of noisy electron microscopy images using salient watersheds and region merging

scientific article

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

scientific article

VANO: a volume-object image annotation system

scientific article published on 2 February 2009

Vibrissa-based object localization in head-fixed mice

scientific article

Virtual finger boosts three-dimensional imaging and microsurgery as well as terabyte volume image visualization and analysis

scientific article

Whole-genome shotgun assembly and comparison of human genome assemblies

scientific article

Why bioimage informatics matters

scientific article published on 28 June 2012

Y chromosome and other heterochromatic sequences of the Drosophila melanogaster genome: how far can we go?

scientific article

mGRASP enables mapping mammalian synaptic connectivity with light microscopy

scientific article

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