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List of works by Robbert J C Slebos

A Reporter System for Translational Readthrough of Stop Codons in Human Cells

scientific article published on 17 April 2012

A bioinformatics workflow for variant peptide detection in shotgun proteomics

scientific article

Accelerated instability testing reveals quantitative mass spectrometry overcomes specimen storage limitations associated with PD-L1 immunohistochemistry

scientific article published on 02 January 2020

An Analysis of the Sensitivity of Proteogenomic Mapping of Somatic Mutations and Novel Splicing Events in Cancer.

scientific article

Analysis of microsatellite mutations in buccal cells from a case-control study for lung cancer.

scientific article published on 6 November 2011

Analytical and statistical methods to evaluate microsatellite allelic imbalance in small amounts of DNA.

scientific article

Application of genomic and proteomic technologies in biomarker discovery

scientific article published on January 2012

Cadmium is a mutagen that acts by inhibiting mismatch repair.

scientific article published on July 2003

Chromosomal abnormalities in bronchial epithelium from smokers, nonsmokers, and lung cancer patients.

scientific article

Colorectal Cancer Cell Line Proteomes are Representative of Primary Tumors and Predict Drug Sensitivity

scientific article

Comparative Shotgun Proteomics Using Spectral Count Data and Quasi-Likelihood Modeling.

scientific article

Comparative shotgun proteomics using spectral count data and quasi-likelihood modeling.

scientific article

Comparison of protein immunoprecipitation-multiple reaction monitoring with ELISA for assay of biomarker candidates in plasma.

scientific article

Corrigendum: Proteomic analysis of colon and rectal carcinoma using standard and customized databases

scientific article published on 21 July 2015

Cysteinyl peptide capture for shotgun proteomics: global assessment of chemoselective fractionation.

scientific article

Depletion of abundant plasma proteins and limitations of plasma proteomics.

scientific article

Detection of pre-invasive lung cancer: technical aspects of the LIFE project

scientific article

Effects of Tobacco Smoking on the Tumor Immune Microenvironment in Head and Neck Squamous Cell Carcinoma

scientific article published on 17 December 2019

Effects of checkpoint kinase 1 inhibition by prexasertib on the tumor immune microenvironment of head and neck squamous cell carcinoma

scientific article published on 30 December 2020

Equivalence of protein inventories obtained from formalin-fixed paraffin-embedded and frozen tissue in multidimensional liquid chromatography-tandem mass spectrometry shotgun proteomic analysis.

scientific article published on 24 May 2009

Evaluation of strong cation exchange versus isoelectric focusing of peptides for multidimensional liquid chromatography-tandem mass spectrometry

scientific article published on December 2008

Gene expression differences associated with human papillomavirus status in head and neck squamous cell carcinoma.

scientific article

Global stability of plasma proteomes for mass spectrometry-based analyses.

scientific article

Glucose-independent glutamine metabolism via TCA cycling for proliferation and survival in B cells

scientific journal article

Histoecology: Applying Ecological Principles and Approaches to Describe and Predict Tumor Ecosystem Dynamics Across Space and Time

scientific article published on 01 July 2020

Human papillomavirus in early laryngeal carcinoma

scientific article

Identification of Proteomic Features To Distinguish Benign Pulmonary Nodules from Lung Adenocarcinoma.

scientific article published on 21 July 2017

In-depth proteomic analysis of nonsmall cell lung cancer to discover molecular targets and candidate biomarkers.

scientific article

Increased epidermal growth factor receptor gene copy number is associated with poor prognosis in head and neck squamous cell carcinomas.

scientific article

Integrative omics analysis reveals the importance and scope of translational repression in microRNA-mediated regulation

scientific article published on 02 April 2013

MOLECULAR DETERMINANTS OF THYROID NODULES WITH INDETERMINATE CYTOLOGY AND RAS MUTATIONS

scientific article published on 21 July 2020

Methods for Peptide and Protein Quantitation by Liquid Chromatography-Multiple Reaction Monitoring Mass Spectrometry ⬇️

scientific article published on February 27, 2011

Mini-and microsatellite mutations in children from Chernobyl accident cleanup workers

scientific article published in April 2004

Mutagenic effect of cadmium on tetranucleotide repeats in human cells

scientific article published on 20 September 2006

Mutations in tetranucleotide repeats following DNA damage depend on repeat sequence and carcinogenic agent.

scientific article published in November 2002

Nuclear epidermal growth factor receptor and p16 expression in head and neck squamous cell carcinoma

scientific article published on 19 October 2012

Oncogenic KRAS and BRAF Drive Metabolic Reprogramming in Colorectal Cancer. ⬇️

scientific article published on 23 June 2016

Phenotype-Driven Plasma Biobanking Strategies and Methods

scientific article published on 14 May 2015

Phosphoinositide kinase-3 status associated with presence or absence of human papillomavirus in head and neck squamous cell carcinomas.

scientific article

Phosphotyrosine signaling analysis in human tumors is confounded by systemic ischemia-driven artifacts and intra-specimen heterogeneity

scientific article

Protein identification using customized protein sequence databases derived from RNA-Seq data

scientific article

Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities

scientific article published on 25 April 2019

Proteogenomic analysis reveals unanticipated adaptations of colorectal tumor cells to deficiencies in DNA mismatch repair.

scientific article published on 18 November 2013

Proteogenomic characterization of human colon and rectal cancer

scientific article (publication date: 18 September 2014)

Proteogenomic landscape of squamous cell lung cancer

scientific article published on 08 August 2019

Proteomic analysis of colon and rectal carcinoma using standard and customized databases

scientific article published on 23 June 2015

Proteomic analysis of oropharyngeal carcinomas reveals novel HPV-associated biological pathways

scientific article

Proteomic consequences of a single gene mutation in a colorectal cancer model

scientific article

Proteomics: clinical applications for head and neck squamous cell carcinoma

scientific article published in June 2006

Quantitative analysis of CDX2 protein expression improves its clinical utility as a prognostic biomarker in stage II and III colon cancer

scientific article published on 17 December 2020

Relative protein quantification and accessible biology in lung tumor proteomes from four LC-MS/MS discovery platforms.

scientific article published on 14 February 2017

Smoking is associated with increased telomerase activity in short-term cultures of human bronchial epithelial cells.

scientific article

lncDIFF: a novel quasi-likelihood method for differential expression analysis of non-coding RNA

scientific article published on 02 July 2019

proBAMsuite, a Bioinformatics Framework for Genome-Based Representation and Analysis of Proteomics Data

scientific article

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