List of works - Rolf Holderegger

A 150-year-old herbarium and floristic data testify regional species decline

scientific article published in 2022

A new analytical approach to landscape genetic modelling: least-cost transect analysis and linear mixed models

scientific article

A practical guide to environmental association analysis in landscape genomics.

scientific article published on 16 July 2015

Adaptive landscape genetics: pitfalls and benefits

scientific article published in August 2012

Adaptive vs. neutral genetic diversity: implications for landscape genetics

scientific article published in 2006

Allelic configuration and polysomic inheritance of highly variable microsatellites in tetraploid gynodioecious Thymus praecox agg.

scientific article

Applications of landscape genetics in conservation biology: concepts and challenges

article

Arable weed seed bank of grassland on former arable fields in mountain regions

scientific article

Aspects of Spore Dispersal in Selaginella

Automated scoring of AFLPs using RawGeno v 2.0, a free R CRAN library

scientific article

Between-year variation in seed weights across altitudes in the high-alpine plant Eritrichium nanum

scientific article published on 15 September 2009

Break zones in the distributions of alleles and species in alpine plants

article

Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

scientific article published on 10 June 2012

Combining Bayesian genetic clustering and ecological niche modeling: Insights into wolf intraspecific genetic structure

scientific article published in 2018

Concordant genetic breaks, identified by combining clustering and tessellation methods, in two co-distributed alpine plant species

scientific article published on 21 September 2009

Connectivity in a pond system influences migration and genetic structure in threespine stickleback

scientific article published on 18 January 2013

Conservation genetics: Linking science with practice

scientific article published on 02 September 2019

Considering spatial and temporal scale in landscape-genetic studies of gene flow

scientific article published on 13 August 2010

Contemporary pollen flow as a multiscale process: Evidence from the insect-pollinated herb, Pulsatilla vulgaris

article

Cost-effective, species-specific microsatellite development for the endangered Dwarf Bulrush (Typha minima) using next-generation sequencing technology

scientific article

Developing a monitoring program of genetic diversity: what do stakeholders say?

scientific article published on 27 May 2021

Developing an Interdisciplinary, Distributed Graduate Course for Twenty-First Century Scientists

Directed dispersal by rotational shepherding supports landscape genetic connectivity in a calcareous grassland plant

scientific article published on 22 January 2014

Disentangling the effects of geographic peripherality and habitat suitability on neutral and adaptive genetic variation in Swiss stone pine

scientific article published on 12 May 2020

Do revisitation studies overestimate local extinction?

scientific article published in 2022

Effect of disturbances on the genetic diversity of an old-forest associated lichen.

scientific article

Effectiveness of Swiss protected areas in maintaining populations of rare vascular plants

scientific article

Effects of floral neighborhood on seed set and degree of outbreeding in a high-alpine cushion plant.

scientific article published on 12 April 2011

Effects of habitat and landscape fragmentation on humans and biodiversity in densely populated landscapes

scientific article

Effects of species traits on the genetic diversity of high-mountain plants: a multi-species study across the Alps and the Carpathians

article

Ein vereinfachter Bestimmungsschlüssel für die Farne der Schweiz ⬇️

scientific article published in 2004

Enabling Effective Problem-oriented Research for Sustainable Development

article

Erhaltung und Wiederansiedlung des Kleinen Rohrkolbens (Typha minima) : Vegetationsaufnahmen, Monitoring und genetische Herkunftsanalysen ⬇️

scientific article published in 2005

Estimating genomic diversity and population differentiation - an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri

scientific article (publication date: 11 January 2017)

Estimation of the relative importance of sexual and vegetative reproduction in the clonal woodland herb Anemone nemorosa

scientific article published on 01 November 1998

European human-dominated landscapes provide ample space for the recolonization of large carnivore populations under future land change scenarios

scientific article published in 2017

European phylogeography of the epiphytic lichen fungus Lobaria pulmonaria and its green algal symbiont

scientific article published on 23 October 2012

Evidence for a possible extinction debt in Swiss wetland specialist plants

scientific article published on 22 January 2020

Evolutionary consequences of autopolyploidy

scientific article (publication date: 11 January 2010)

Fitness in Naturally Occurring and Restored Populations of a Grassland Plant<i>Lychnis flos-cuculi</i>in a Swiss Agricultural Landscape

scientific article published on 11 April 2013

Forecasting changes in population genetic structure of alpine plants in response to global warming

scientific article published on 18 April 2012

Genetic consequences of low local tree densities – Implications for the management of naturally rare, insect pollinated species in temperate forests

scientific article published in 2011

Genetic consequences of using seed mixtures in restoration: A case study of a wetland plant Lychnis flos-cuculi

scientific article published on 02 December 2011

Genetic diversity in widespread species is not congruent with species richness in alpine plant communities

scientific article

Genomic signatures of convergent adaptation to Alpine environments in three Brassicaceae species

scientific article published on 24 September 2020

Heterogeneity fosters biodiversity: Linking history and ecology of dry calcareous grasslands

scientific article published in 2012

Highly polymorphic microsatellite markers in Pulsatilla vulgaris (Ranunculaceae) using next-generation sequencing

scientific article published on 7 July 2015

History or ecology? Substrate type as a major driver of spatial genetic structure in Alpine plants

scientific article

How to make landscape genetics beneficial for conservation management?

article

Identifying future research needs in landscape genetics: where to from here?

article

Identifying genetic signatures of selection in a non-model species, alpine gentian (Gentiana nivalis L.), using a landscape genetic approach

article

Increasing Pond Density to Maintain a Patchy Habitat Network of the European Treefrog (Hyla arborea)

scientific article published in 2015

Influence of parameter settings in automated scoring of AFLPs on population genetic analysis.

scientific article published on 26 November 2012

Is functional connectivity in common grasshopper species affected by fragmentation in an agricultural landscape?

article

Ist die Reliktvegetation der Fallätsche gefährdet? : Floren- und Vegetationsveränderung in einem Erosionstrichter bei Zürich ⬇️

scientific article published in 1996

Land ahead: using genome scans to identify molecular markers of adaptive relevance

scientific article published on 30 May 2009

Landscape Genetics

article

Landscape genetics as a tool for conservation planning: predicting the effects of landscape change on gene flow

scientific article published in March 2014

Landscape genetics of plants ⬇️

scientific article published on December 1, 2010

Landscape genetics: where are we now?

scientific article published on 13 August 2010

Landscape-level gene flow in Lobaria pulmonaria, an epiphytic lichen

article

Lower selfing rate at higher altitudes in the alpine plant Eritrichium nanum (Boraginaceae)

article

Marie Brockmann-Jerosch and her influence on Alpine phylogeography

Microsatellites reveal regional population differentiation and isolation in Lobaria pulmonaria, an epiphytic lichen

scientific article published in February 2005

Microsatellites reveal substantial among-population genetic differentiation and strong inbreeding in the relict fern Dryopteris aemula

scientific article

Models of Coupled Settlement and Habitat Networks for Biodiversity Conservation: Conceptual Framework, Implementation and Potential Applications

scientific article published on 16 April 2018

Monitoring of species’ genetic diversity in Europe varies greatly and overlooks potential climate change impacts

scientific article published on 15 January 2024

Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field

scientific article

Phylogeography of the Arctic-Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation

scientific article published on 01 June 2003

Population genomic footprints of selection and associations with climate in natural populations of Arabidopsis halleri from the Alps

scientific article

Populationsbiologische Untersuchungen an einer Flaggschiff-Art der Magerrasen : Pulsatilla vulgaris Mill. in der Nordostschweiz ⬇️

scientific article published in 2002

Populationsgeschichte des seltenen Kammfarns (Dryopteris cristata) in der Schweiz ⬇️

scientific article published in 2000

Predicting species occurrences with habitat network models

scientific article published on 04 September 2019

Quantifying dispersal and establishment limitation in a population of an epiphytic lichen.

scientific article published on August 2006

Reply to Kershaw and Rosenbaum

scientific article published on 13 January 2014

S-allele diversity suggests no mate limitation in small populations of a self-incompatible plant

scientific article published on 26 August 2008

Spatial genetic structure and clonal diversity of Anemone nemorosa in late successional deciduous woodlands of Central Europe

scientific article published in 2000

Spatial scale affects landscape genetic analysis of a wetland grasshopper

scientific article

Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrages (SaxifragasectionPorphyrionsubsectionOppositifoliae)

scientific article published in 2013

Tales of the unexpected: phylogeography of the arctic-alpine model plant Saxifraga oppositifolia (Saxifragaceae) revisited

scientific article published on 19 July 2012

Ten years of landscape genetics

scientific article published on 13 June 2013

The 50 most important questions relating to the maintenance and restoration of an ecological continuum in the European Alps

scientific article

The distribution of climbing chalk on climbed boulders and its impact on rock-dwelling fern and moss species

scientific article published on 01 October 2020

The effect of recent habitat change on genetic diversity at putatively adaptive and neutral loci in <i>Primula veris</i> in semi-natural grasslands

The genetic effects of roads: A review of empirical evidence

scientific article published on 03 August 2010

Tracking genes of ecological relevance using a genome scan in two independent regional population samples of Arabis alpina

scientific article published in July 2010

Trait differentiation and adaptation of plants along elevation gradients

scientific article published on 8 March 2018

Using the 454 pyrosequencing-based technique in the development of nuclear microsatellite loci in the alpine plant Arabis alpina (Brassicaceae).

scientific article

Utility of multilocus genotypes for taxon assignment in stands of closely related European white oaks from Switzerland

scientific article published on 5 September 2008

Validation of outlier loci through replication in independent data sets: a test on Arabis alpina.

scientific article

Variogram analysis of the spatial genetic structure of continuous populations using multilocus microsatellite data.

scientific article

Where do you come from, where do you go? Directional migration rates in landscape genetics

scientific article published in December 2012

Zur Flora und Vegetation des Küsnachtertobels : Veränderungen innerhalb der letzten fünfzig Jahre ⬇️

scientific article published in 1994

List of works by Rolf Holderegger

A 150-year-old herbarium and floristic data testify regional species decline

A new analytical approach to landscape genetic modelling: least-cost transect analysis and linear mixed models

A practical guide to environmental association analysis in landscape genomics.

Adaptive landscape genetics: pitfalls and benefits

Adaptive vs. neutral genetic diversity: implications for landscape genetics

Allelic configuration and polysomic inheritance of highly variable microsatellites in tetraploid gynodioecious Thymus praecox agg.

Applications of landscape genetics in conservation biology: concepts and challenges

Arable weed seed bank of grassland on former arable fields in mountain regions

Aspects of Spore Dispersal in Selaginella

Automated scoring of AFLPs using RawGeno v 2.0, a free R CRAN library

Between-year variation in seed weights across altitudes in the high-alpine plant Eritrichium nanum

Break zones in the distributions of alleles and species in alpine plants

Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

Combining Bayesian genetic clustering and ecological niche modeling: Insights into wolf intraspecific genetic structure

Concordant genetic breaks, identified by combining clustering and tessellation methods, in two co-distributed alpine plant species

Connectivity in a pond system influences migration and genetic structure in threespine stickleback

Conservation genetics: Linking science with practice

Considering spatial and temporal scale in landscape-genetic studies of gene flow

Contemporary pollen flow as a multiscale process: Evidence from the insect-pollinated herb, Pulsatilla vulgaris

Cost-effective, species-specific microsatellite development for the endangered Dwarf Bulrush (Typha minima) using next-generation sequencing technology

Developing a monitoring program of genetic diversity: what do stakeholders say?

Developing an Interdisciplinary, Distributed Graduate Course for Twenty-First Century Scientists

Directed dispersal by rotational shepherding supports landscape genetic connectivity in a calcareous grassland plant

Disentangling the effects of geographic peripherality and habitat suitability on neutral and adaptive genetic variation in Swiss stone pine

Do revisitation studies overestimate local extinction?

Effect of disturbances on the genetic diversity of an old-forest associated lichen.

Effectiveness of Swiss protected areas in maintaining populations of rare vascular plants

Effects of floral neighborhood on seed set and degree of outbreeding in a high-alpine cushion plant.

Effects of habitat and landscape fragmentation on humans and biodiversity in densely populated landscapes

Effects of species traits on the genetic diversity of high-mountain plants: a multi-species study across the Alps and the Carpathians

Ein vereinfachter Bestimmungsschlüssel für die Farne der Schweiz ⬇️

Enabling Effective Problem-oriented Research for Sustainable Development

Erhaltung und Wiederansiedlung des Kleinen Rohrkolbens (Typha minima) : Vegetationsaufnahmen, Monitoring und genetische Herkunftsanalysen ⬇️

Estimating genomic diversity and population differentiation - an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri

Estimation of the relative importance of sexual and vegetative reproduction in the clonal woodland herb Anemone nemorosa

European human-dominated landscapes provide ample space for the recolonization of large carnivore populations under future land change scenarios

European phylogeography of the epiphytic lichen fungus Lobaria pulmonaria and its green algal symbiont

Evidence for a possible extinction debt in Swiss wetland specialist plants

Evolutionary consequences of autopolyploidy

Fitness in Naturally Occurring and Restored Populations of a Grassland Plant<i>Lychnis flos-cuculi</i>in a Swiss Agricultural Landscape

Forecasting changes in population genetic structure of alpine plants in response to global warming

Genetic consequences of low local tree densities – Implications for the management of naturally rare, insect pollinated species in temperate forests

Genetic consequences of using seed mixtures in restoration: A case study of a wetland plant Lychnis flos-cuculi

Genetic diversity in widespread species is not congruent with species richness in alpine plant communities

Genomic signatures of convergent adaptation to Alpine environments in three Brassicaceae species

Heterogeneity fosters biodiversity: Linking history and ecology of dry calcareous grasslands

Highly polymorphic microsatellite markers in Pulsatilla vulgaris (Ranunculaceae) using next-generation sequencing

History or ecology? Substrate type as a major driver of spatial genetic structure in Alpine plants

How to make landscape genetics beneficial for conservation management?

Identifying future research needs in landscape genetics: where to from here?

Identifying genetic signatures of selection in a non-model species, alpine gentian (Gentiana nivalis L.), using a landscape genetic approach

Increasing Pond Density to Maintain a Patchy Habitat Network of the European Treefrog (Hyla arborea)

Influence of parameter settings in automated scoring of AFLPs on population genetic analysis.

Is functional connectivity in common grasshopper species affected by fragmentation in an agricultural landscape?

Ist die Reliktvegetation der Fallätsche gefährdet? : Floren- und Vegetationsveränderung in einem Erosionstrichter bei Zürich ⬇️

Land ahead: using genome scans to identify molecular markers of adaptive relevance

Landscape Genetics

Landscape genetics as a tool for conservation planning: predicting the effects of landscape change on gene flow

Landscape genetics of plants ⬇️

Landscape genetics: where are we now?

Landscape-level gene flow in Lobaria pulmonaria, an epiphytic lichen

Lower selfing rate at higher altitudes in the alpine plant Eritrichium nanum (Boraginaceae)

Marie Brockmann-Jerosch and her influence on Alpine phylogeography

Microsatellites reveal regional population differentiation and isolation in Lobaria pulmonaria, an epiphytic lichen

Microsatellites reveal substantial among-population genetic differentiation and strong inbreeding in the relict fern Dryopteris aemula

Models of Coupled Settlement and Habitat Networks for Biodiversity Conservation: Conceptual Framework, Implementation and Potential Applications

Monitoring of species’ genetic diversity in Europe varies greatly and overlooks potential climate change impacts

Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field

Phylogeography of the Arctic-Alpine Saxifraga oppositifolia (Saxifragaceae) and some related taxa based on cpDNA and ITS sequence variation

Population genomic footprints of selection and associations with climate in natural populations of Arabidopsis halleri from the Alps

Populationsbiologische Untersuchungen an einer Flaggschiff-Art der Magerrasen : Pulsatilla vulgaris Mill. in der Nordostschweiz ⬇️

Populationsgeschichte des seltenen Kammfarns (Dryopteris cristata) in der Schweiz ⬇️

Predicting species occurrences with habitat network models

Quantifying dispersal and establishment limitation in a population of an epiphytic lichen.

Reply to Kershaw and Rosenbaum

S-allele diversity suggests no mate limitation in small populations of a self-incompatible plant

Spatial genetic structure and clonal diversity of Anemone nemorosa in late successional deciduous woodlands of Central Europe

Spatial scale affects landscape genetic analysis of a wetland grasshopper

Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrages (SaxifragasectionPorphyrionsubsectionOppositifoliae)