List of works - Fernando Vargas

An untargeted metabolomics analysis of exogenous chemicals in human milk and transfer to the infant

scientific article published in 2022

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 September 2019

Computational Removal of Undesired Mass Spectral Features Possessing Repeat Units via a Kendrick Mass Filter

scientific article published on 28 September 2018

Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples

scientific article published on 19 June 2017

De Novo Peptide Sequencing Reveals Many Cyclopeptides in the Human Gut and Other Environments

scientific article published on 18 December 2019

Dietary prebiotics alter novel microbial dependent fecal metabolites that improve sleep

scientific article published on 02 March 2020

Experimental Chagas disease-induced perturbations of the fecal microbiome and metabolome.

scientific article published on 12 March 2018

Feature-based molecular networking in the GNPS analysis environment

scientific article published on 24 August 2020

Gastrointestinal Surgery for Inflammatory Bowel Disease Persistently Lowers Microbiome and Metabolome Diversity

scientific article published on 07 October 2020

Global chemical effects of the microbiome include new bile-acid conjugations

scientific article published on 26 February 2020

Initial Development toward Non-Invasive Drug Monitoring via Untargeted Mass Spectrometric Analysis of Human Skin

scientific article published on 10 June 2019

Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment

scientific article

Mass Spectrometry-Based Visualization of Molecules Associated with Human Habitats.

scientific article published on 12 October 2016

Mass spectrometry searches using MASST

scientific article published on 01 January 2020

MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities

scientific article published on 16 October 2019

Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Signatures

scientific article published on 01 September 2020

Multiomic Analyses of Nascent Preterm Infant Microbiomes Differentiation Suggest Opportunities for Targeted Intervention

scientific article published in 2022

Paroxetine Administration Affects Microbiota and Bile Acid Levels in Mice

scientific article published on 04 June 2020

Protocol for community-created public MS/MS reference spectra within the Global Natural Products Social Molecular Networking infrastructure

scientific article published on 13 January 2020

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

ReDU: a framework to find and reanalyze public mass spectrometry data

scientific article published on 17 August 2020

Repeated sleep disruption in mice leads to persistent shifts in the fecal microbiome and metabolome

scientific article published on 20 February 2020

Reproducible Molecular Networking Of Untargeted Mass Spectrometry Data Using GNPS

scholarly article published 8 August 2019

Reproducible molecular networking of untargeted mass spectrometry data using GNPS

scientific article published on 13 May 2020

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 August 2019

Untargeted Mass Spectrometry-Based Metabolomics Tracks Molecular Changes in Raw and Processed Foods and Beverages

scientific article published on 15 June 2018

Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages

scientific article published on 30 July 2019

List of works by Fernando Vargas

An untargeted metabolomics analysis of exogenous chemicals in human milk and transfer to the infant

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Computational Removal of Undesired Mass Spectral Features Possessing Repeat Units via a Kendrick Mass Filter

Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples

De Novo Peptide Sequencing Reveals Many Cyclopeptides in the Human Gut and Other Environments

Dietary prebiotics alter novel microbial dependent fecal metabolites that improve sleep

Experimental Chagas disease-induced perturbations of the fecal microbiome and metabolome.

Feature-based molecular networking in the GNPS analysis environment

Gastrointestinal Surgery for Inflammatory Bowel Disease Persistently Lowers Microbiome and Metabolome Diversity

Global chemical effects of the microbiome include new bile-acid conjugations

Initial Development toward Non-Invasive Drug Monitoring via Untargeted Mass Spectrometric Analysis of Human Skin

Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment

Mass Spectrometry-Based Visualization of Molecules Associated with Human Habitats.

Mass spectrometry searches using MASST

MetaMiner: A Scalable Peptidogenomics Approach for Discovery of Ribosomal Peptide Natural Products with Blind Modifications from Microbial Communities

Mortality Risk Profiling of Staphylococcus aureus Bacteremia by Multi-omic Serum Analysis Reveals Early Predictive and Pathogenic Signatures

Multiomic Analyses of Nascent Preterm Infant Microbiomes Differentiation Suggest Opportunities for Targeted Intervention

Paroxetine Administration Affects Microbiota and Bile Acid Levels in Mice

Protocol for community-created public MS/MS reference spectra within the Global Natural Products Social Molecular Networking infrastructure

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

ReDU: a framework to find and reanalyze public mass spectrometry data

Repeated sleep disruption in mice leads to persistent shifts in the fecal microbiome and metabolome

Reproducible Molecular Networking Of Untargeted Mass Spectrometry Data Using GNPS

Reproducible molecular networking of untargeted mass spectrometry data using GNPS

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Untargeted Mass Spectrometry-Based Metabolomics Tracks Molecular Changes in Raw and Processed Foods and Beverages

Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages