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List of works by Alexey V Melnik

3D molecular cartography using LC-MS facilitated by Optimus and 'ili software.

scientific article published on 21 December 2017

A Cutibacterium acnes antibiotic modulates human skin microbiota composition in hair follicles ⬇️

scientific article published on 01 November 2020

American Gut: an Open Platform for Citizen Science Microbiome Research

article

Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis.

scientific article published on February 2017

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 September 2019

Auto-deconvolution and molecular networking of gas chromatography-mass spectrometry data

scientific article published on 09 November 2020

Best practices for analysing microbiomes

scientific article published on 01 July 2018

Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples

scientific article published on 19 June 2017

Creating a 3D microbial and chemical snapshot of a human habitat

scientific article published on 27 February 2018

Erratum: Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides

scientific article published on 23 January 2017

Feature-Based Molecular Networking Analysis of the Metabolites Produced by in vitro Solid-State Fermentation Reveals Pathways for the Bioconversion of Epigallocatechin Gallate

scientific article published on 03 July 2020

From Sample to Multi-Omics Conclusions in under 48 Hours

scientific article (publication date: 26 April 2016)

Global chemical effects of the microbiome include new bile-acid conjugations

scientific article published on 26 February 2020

Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease

scientific article published on 16 April 2019

Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides ⬇️

scientific article published on 31 October 2016

Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems

Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome.

scientific article published in May 2018

Lifestyle chemistries from phones for individual profiling

scientific article (publication date: 29 November 2016)

Mass Spectrometry Based Molecular 3D-Cartography of Plant Metabolites

scientific article

Mass Spectrometry Uncovers the Role of Surfactin as an Interspecies Recruitment Factor

scientific article published on 22 February 2019

Mass spectrometry searches using MASST

scientific article published on 01 January 2020

Mass spectrometry tools and workflows for revealing microbial chemistry

scientific article

Minimum Information about a Biosynthetic Gene cluster.

scientific article published on August 2015

Molecular and Microbial Microenvironments in Chronically Diseased Lungs Associated with Cystic Fibrosis

scientific article published on 24 September 2019

Natural products as mediators of disease.

scientific article

Niche partitioning of a pathogenic microbiome driven by chemical gradients

scientific article published on 26 September 2018

Pep2Path: automated mass spectrometry-guided genome mining of peptidic natural products

scientific article

Prioritizing Natural Product Diversity in a Collection of 146 Bacterial Strains Based on Growth and Extraction Protocols

scientific article published on 11 November 2016

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

ReDU: a framework to find and reanalyze public mass spectrometry data

scientific article published on 17 August 2020

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 August 2019

SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information

scientific article published on 18 March 2019

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

scientific article (publication date: 9 August 2016)

Spatial Molecular Architecture of the Microbial Community of a Peltigera Lichen

scientific article (publication date: 20 December 2016)

The impact of skin care products on skin chemistry and microbiome dynamics

scientific article published on 12 June 2019

Three-Dimensional Microbiome and Metabolome Cartography of a Diseased Human Lung

scientific article published on 17 October 2017

Untargeted Mass Spectrometry-Based Metabolomics Tracks Molecular Changes in Raw and Processed Foods and Beverages

scientific article published on 15 June 2018

Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages

scientific article published on 30 July 2019

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