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List of works by Clarisse Marotz

A comparison of DNA/RNA extraction protocols for high-throughput sequencing of microbial communities

scientific article published on 14 November 2020

American Gut: an Open Platform for Citizen Science Microbiome Research

article

Are microbiome studies ready for hypothesis-driven research?

scientific article published on 27 July 2018

Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 September 2019

Contamination in Low Microbial Biomass Microbiome Studies: Issues and Recommendations

scientific article published on 26 November 2018

Culturing: Looking it up in our gut

article

DNA extraction for streamlined metagenomics of diverse environmental samples

scientific article published on June 2017

Differing salivary microbiome diversity, community and diurnal rhythmicity in association with affective state and peripheral inflammation in adults

scientific article published on 14 February 2020

Divergent clonal evolution of castration-resistant neuroendocrine prostate cancer

scientific article published on 8 February 2016

EMPress Enables Tree-Guided, Interactive, and Exploratory Analyses of Multi-omic Data Sets

scientific article published on 15 March 2021

Enhancing untargeted metabolomics using metadata-based source annotation

scientific article published in 2022

Establishing microbial composition measurement standards with reference frames.

scientific article

Feasibility of SARS-CoV-2 virus detection from consumer-grade cotton swabs

scientific article published on 18 May 2020

Feasibility of using alternative swabs and storage solutions for paired SARS-CoV-2 detection and microbiome analysis in the hospital environment

scientific article published on 18 August 2020

Impacts of the Human Gut Microbiome on Therapeutics.

scientific article published on 2 October 2017

Improving saliva shotgun metagenomics by chemical host DNA depletion

scientific article published on 27 February 2018

Linking metabolic phenotypes to pathogenic traits among "Candidatus Liberibacter asiaticus" and its hosts

scientific article published on 04 August 2020

Microbial context predicts SARS-CoV-2 prevalence in patients and the hospital built environment

scientific article published on 22 November 2020

Multi-omics profiling of Earth’s biomes reveals patterns of diversity and co-occurrence in microbial and metabolite composition across environments

scientific article published on 6 June 2021

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

Quantifying Live Microbial Load in Human Saliva Samples over Time Reveals Stable Composition and Dynamic Load

scientific article published on 15 February 2021

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

scientific article published on 01 August 2019

SARS-CoV-2 Infection Among Symptom-Free Healthcare Workers

scientific article published on 05 August 2020

SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment

scientific article published on 08 June 2021

SPOP mutation leads to genomic instability in prostate cancer.

scientific article

The Microbiome and Human Biology.

scientific article published on 20 March 2017

Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary

scientific article published on 24 May 2019

redbiom: a Rapid Sample Discovery and Feature Characterization System

scientific article published on 25 June 2019

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