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List of works by Mukul S. Bansal

A Note on the Fixed Parameter Tractability of the Gene-Duplication Problem ⬇️

scientific article published on May 1, 2011

A comparative encyclopedia of DNA elements in the mouse genome

scientific article

Algorithms for genome-scale phylogenetics using gene tree parsimony

scientific article published in July 2013

An Integrated Reconciliation Framework for Domain, Gene, and Species Level Evolution

scientific article published on 12 June 2018

An Omega(n2/ log n) speed-up of TBR heuristics for the gene-duplication problem

scientific article published in October 2008

Assessing the accuracy of phylogenetic rooting methods on prokaryotic gene families

scientific article published on 15 May 2020

Efficient algorithms for the reconciliation problem with gene duplication, horizontal transfer and loss

scientific article

Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models

scientific article

Exact Algorithms for Duplication-Transfer-Loss Reconciliation with Non-Binary Gene Trees

scientific article published on June 2017

Genome-scale phylogenetics: inferring the plant tree of life from 18,896 gene trees

scientific article (publication date: March 2011)

Improved gene tree error correction in the presence of horizontal gene transfer

scientific article

Inferring species trees from gene duplication episodes

article

Linear-time algorithms for phylogenetic tree completion under Robinson-Foulds distance

scientific article published on 13 April 2020

On the Complexity of Duplication-Transfer-Loss Reconciliation with Non-Binary Gene Trees

scientific article published on 23 December 2015

On the impact of uncertain gene tree rooting on duplication-transfer-loss reconciliation

article

Pareto-optimal phylogenetic tree reconciliation

scientific article

PhyloFinder: an intelligent search engine for phylogenetic tree databases

scientific article

RANGER-DTL 2.0: rigorous reconstruction of gene-family evolution by duplication, transfer and loss

scientific article published on 01 September 2018

RecPhyloXML: a format for reconciled gene trees

article

Reconciliation revisited: handling multiple optima when reconciling with duplication, transfer, and loss

scientific article published on 14 September 2013

Robinson-Foulds Supertrees

scientific article (publication date: 24 February 2010)

SaGePhy: an improved phylogenetic simulation framework for gene and subgene evolution

scientific article published on 01 September 2019

Systematic inference of highways of horizontal gene transfer in prokaryotes

scientific article

TNet: Transmission Network Inference Using Within-Host Strain Diversity and its Application to Geographical Tracking of COVID-19 Spread

scientific article published on 13 July 2021

The gene-duplication problem: near-linear time algorithms for NNI-based local searches

scientific article published in April 2009

The multiple gene duplication problem revisited

scientific article published on July 2008

TreeFix: statistically informed gene tree error correction using species trees

scientific article

iGTP: a software package for large-scale gene tree parsimony analysis

scientific article

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