List of works - Matias Kirst

A Consensus Genetic Map for Pinus taeda and Pinus elliottii and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of Pinus taeda.

scientific article published on 11 June 2015

A high-density gene map of loblolly pine (Pinus taeda L.) based on exome sequence capture genotyping

scientific article published on 10 January 2014

A high-density transcript linkage map with 1,845 expressed genes positioned by microarray-based Single Feature Polymorphisms (SFP) in Eucalyptus

scientific article

A statistical model for testing the pleiotropic control of phenotypic plasticity for a count trait ⬇️

scientific article published on May 2008

Accelerating forest tree breeding by integrating genomic selection and greenhouse phenotyping

scientific article published on 20 August 2020

Accelerating the domestication of forest trees in a changing world

scientific article

Aluminum tolerance in maize is associated with higher MATE1 gene copy number

scientific article published on 11 March 2013

Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana

scientific article

Association and linkage analysis of aluminum tolerance genes in maize

scientific article

Association genetics of oleoresin flow in loblolly pine: discovering genes and predicting phenotype for improved resistance to bark beetles and bioenergy potential

scientific article

Capturing and genotyping the genome-wide genetic diversity of trees for association mapping and genomic selection

scientific article

Chilling-responsive DEMETER-LIKE DNA demethylase mediates in poplar bud break.

scientific article published on 13 July 2017

Coordinated genetic regulation of growth and lignin revealed by quantitative trait locus analysis of cDNA microarray data in an interspecific backcross of eucalyptus

scientific article

Decoding exceptional plant traits by comparative single-cell genomics

scientific article published in 2022

Discovering candidate genes that regulate resin canal number in Pinus taeda stems by integrating genetic analysis across environments, ages, and populations

scientific article published on 30 September 2014

Diversification in the genetic architecture of gene expression and transcriptional networks in organ differentiation of Populus.

scientific article

Effect of BLUP prediction on genomic selection: practical considerations to achieve greater accuracy in genomic selection

scientific article

Eucalyptus applied genomics: from gene sequences to breeding tools

scientific article

Functional and comparative genomics reveals conserved noncoding sequences in the nitrogen‐fixing clade

scientific article published on 29 January 2022

Genetic architecture of transcript-level variation in differentiating xylem of a eucalyptus hybrid

scientific article

Genetic mapping in forest trees: markers, linkage analysis and genomics

scientific article published in January 2004

Genetical genomics of Populus leaf shape variation.

scientific article published on 30 June 2015

Genome-wide association study reveals putative regulators of bioenergy traits in Populus deltoides.

scientific article published on 6 September 2016

Genomic prediction in contrast to a genome-wide association study in explaining heritable variation of complex growth traits in breeding populations of Eucalyptus.

scientific article published on 11 July 2017

Genomics of growth traits in forest trees.

scientific article published on 29 January 2009

Growth performance and root transcriptome remodeling of Arabidopsis in response to Mars-like levels of magnesium sulfate

scientific article

High-throughput SNP genotyping in the highly heterozygous genome of Eucalyptus: assay success, polymorphism and transferability across species

scientific article

High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome

scientific article

High-throughput screening of plant cell-wall composition using pyrolysis molecular beam mass spectroscopy.

scientific article published on January 2009

Identification of loci affecting flavour volatile emissions in tomato fruits

scientific article published on 10 February 2006

Increased Proportion of Variance Explained and Prediction Accuracy of Survival of Breast Cancer Patients with Use of Whole-Genome Multiomic Profiles

scientific article published on 29 April 2016

Independent and Joint-GWAS for growth traits in Eucalyptus by assembling genome-wide data for 3373 individuals across four breeding populations

scientific article published on 25 September 2018

Integration of genetic, genomic and transcriptomic information identifies putative regulators of adventitious root formation in Populus

scientific article

Lignin and biomass: a negative correlation for wood formation and lignin content in trees

scientific article published on October 2010

Metabolic regulation of triacylglycerol accumulation in the green algae: identification of potential targets for engineering to improve oil yield

scientific article

Overexpression of DEMETER, a DNA demethylase, promotes early apical bud maturation in poplar

scientific article published on 15 August 2017

Population genomics of the eastern cottonwood (Populus deltoides).

scientific article

Quantitative genetic analysis of biomass and wood chemistry of Populus under different nitrogen levels

scientific article published in June 2009

RNA-Seq reveals genotype-specific molecular responses to water deficit in eucalyptus

scientific article

Regulation of biomass growth and carbon partitioning in poplar – molecular characterization of a candidate gene.

scientific article

Spatial genetic structure, genetic diversity and pollen dispersal in a harvested population of Astrocaryum aculeatum in the Brazilian Amazon.

scientific article

Spinning gland transcriptomics from two main clades of spiders (order: Araneae)--insights on their molecular, anatomical and behavioral evolution

scientific article

Stability of Genomic Selection prediction models across ages and environments.

scientific article

Targeted sequencing in the loblolly pine (Pinus taeda) megagenome by exome capture

scientific article

The transcriptome of a Populus pseudo-backcross identifies genes and pathways co-expressed with monolignol biosynthesis

scientific article

Transcriptional profile of maize roots under acid soil growth

scientific article

Transcriptional profiling of aluminum toxicity and tolerance responses in maize roots.

scientific article published on 9 April 2008

Unraveling additive from nonadditive effects using genomic relationship matrices

scientific article

Whole‐exome targeted sequencing of the uncharacterized pine genome ⬇️

scientific article published on May 7, 2013

List of works by Matias Kirst

A Consensus Genetic Map for Pinus taeda and Pinus elliottii and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of Pinus taeda.

A high-density gene map of loblolly pine (Pinus taeda L.) based on exome sequence capture genotyping

A high-density transcript linkage map with 1,845 expressed genes positioned by microarray-based Single Feature Polymorphisms (SFP) in Eucalyptus

A statistical model for testing the pleiotropic control of phenotypic plasticity for a count trait ⬇️

Accelerating forest tree breeding by integrating genomic selection and greenhouse phenotyping

Accelerating the domestication of forest trees in a changing world

Aluminum tolerance in maize is associated with higher MATE1 gene copy number

Apparent homology of expressed genes from wood-forming tissues of loblolly pine (Pinus taeda L.) with Arabidopsis thaliana

Association and linkage analysis of aluminum tolerance genes in maize

Association genetics of oleoresin flow in loblolly pine: discovering genes and predicting phenotype for improved resistance to bark beetles and bioenergy potential

Capturing and genotyping the genome-wide genetic diversity of trees for association mapping and genomic selection

Chilling-responsive DEMETER-LIKE DNA demethylase mediates in poplar bud break.

Coordinated genetic regulation of growth and lignin revealed by quantitative trait locus analysis of cDNA microarray data in an interspecific backcross of eucalyptus

Decoding exceptional plant traits by comparative single-cell genomics

Discovering candidate genes that regulate resin canal number in Pinus taeda stems by integrating genetic analysis across environments, ages, and populations

Diversification in the genetic architecture of gene expression and transcriptional networks in organ differentiation of Populus.

Effect of BLUP prediction on genomic selection: practical considerations to achieve greater accuracy in genomic selection

Eucalyptus applied genomics: from gene sequences to breeding tools

Functional and comparative genomics reveals conserved noncoding sequences in the nitrogen‐fixing clade

Genetic architecture of transcript-level variation in differentiating xylem of a eucalyptus hybrid

Genetic mapping in forest trees: markers, linkage analysis and genomics

Genetical genomics of Populus leaf shape variation.

Genome-wide association study reveals putative regulators of bioenergy traits in Populus deltoides.

Genomic prediction in contrast to a genome-wide association study in explaining heritable variation of complex growth traits in breeding populations of Eucalyptus.

Genomics of growth traits in forest trees.

Growth performance and root transcriptome remodeling of Arabidopsis in response to Mars-like levels of magnesium sulfate

High-throughput SNP genotyping in the highly heterozygous genome of Eucalyptus: assay success, polymorphism and transferability across species

High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome

High-throughput screening of plant cell-wall composition using pyrolysis molecular beam mass spectroscopy.

Identification of loci affecting flavour volatile emissions in tomato fruits

Increased Proportion of Variance Explained and Prediction Accuracy of Survival of Breast Cancer Patients with Use of Whole-Genome Multiomic Profiles

Independent and Joint-GWAS for growth traits in Eucalyptus by assembling genome-wide data for 3373 individuals across four breeding populations

Integration of genetic, genomic and transcriptomic information identifies putative regulators of adventitious root formation in Populus

Lignin and biomass: a negative correlation for wood formation and lignin content in trees

Metabolic regulation of triacylglycerol accumulation in the green algae: identification of potential targets for engineering to improve oil yield

Overexpression of DEMETER, a DNA demethylase, promotes early apical bud maturation in poplar

Population genomics of the eastern cottonwood (Populus deltoides).

Quantitative genetic analysis of biomass and wood chemistry of Populus under different nitrogen levels

RNA-Seq reveals genotype-specific molecular responses to water deficit in eucalyptus

Regulation of biomass growth and carbon partitioning in poplar – molecular characterization of a candidate gene.

Spatial genetic structure, genetic diversity and pollen dispersal in a harvested population of Astrocaryum aculeatum in the Brazilian Amazon.

Spinning gland transcriptomics from two main clades of spiders (order: Araneae)--insights on their molecular, anatomical and behavioral evolution

Stability of Genomic Selection prediction models across ages and environments.

Targeted sequencing in the loblolly pine (Pinus taeda) megagenome by exome capture

The transcriptome of a Populus pseudo-backcross identifies genes and pathways co-expressed with monolignol biosynthesis

Transcriptional profile of maize roots under acid soil growth

Transcriptional profiling of aluminum toxicity and tolerance responses in maize roots.

Unraveling additive from nonadditive effects using genomic relationship matrices

Whole‐exome targeted sequencing of the uncharacterized pine genome ⬇️