List of works - Torben Asp

A Gene Encoding a DUF247 Domain Protein Cosegregates with the S Self-Incompatibility Locus in Perennial Ryegrass

scientific article published on 10 December 2015

A synteny-based draft genome sequence of the forage grass Lolium perenne

scientific article published on 26 September 2015

A transcriptome map of perennial ryegrass (Lolium perenne L.).

scientific article

Accuracy of Genomic Prediction in a Commercial Perennial Ryegrass Breeding Program

scientific article published on November 2016

Allelic variation in the perennial ryegrass FLOWERING LOCUS T gene is associated with changes in flowering time across a range of populations

scientific article published on 29 November 2010

Association studies using family pools of outcrossing crops based on allele-frequency estimates from DNA sequencing

scientific article

Auxin Binding Protein 1 Reinforces Resistance to Sugarcane Mosaic Virus in Maize

scientific article published on 4 August 2017

Breaking Free: The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover

scientific article published on 25 April 2019

Candidate gene association mapping for winter survival and spring regrowth in perennial ryegrass.

scientific article

Changes in Lolium perenne transcriptome during cold acclimation in two genotypes adapted to different climatic conditions

scientific article published on 17 October 2015

Comparative sequence analysis of VRN1 alleles of Lolium perenne with the co-linear regions in barley, wheat, and rice

scientific article published on 12 November 2011

Comparative transcriptome analysis within the Lolium/Festuca species complex reveals high sequence conservation.

scientific article

Construction of two Lolium perenne BAC libraries and identification of BACs containing candidate genes for disease resistance and forage quality

scientific article published on 17 November 2006

De novo assembly of Agave sisalana transcriptome in response to drought stress provides insight into the tolerance mechanisms

scientific article published in Scientific Reports

De novo assembly of the perennial ryegrass transcriptome using an RNA-Seq strategy.

scientific article published on 15 August 2014

Determination of Loline Alkaloids and Mycelial Biomass in Endophyte-Infected Schedonorus Pratensis by Near-Infrared Spectroscopy and Chemometrics

scientific article published on 21 May 2020

EST-derived SSR markers used as anchor loci for the construction of a consensus linkage map in ryegrass (Lolium spp.).

scientific article

Estimating genomic heritabilities at the level of family-pool samples of perennial ryegrass using genotyping-by-sequencing

scientific article published on 25 September 2015

Evidence for adaptive evolution of low-temperature stress response genes in a Pooideae grass ancestor

scientific article published on 23 May 2013

Expressed sequence tag-derived microsatellite markers of perennial ryegrass (Lolium perenne L.)

Flow sorting and sequencing meadow fescue chromosome 4F.

scientific article published on 4 October 2013

Frequency, type, and distribution of EST-SSRs from three genotypes of Lolium perenne, and their conservation across orthologous sequences of Festuca arundinacea, Brachypodium distachyon, and Oryza sativa

scientific article

Fructan metabolism and changes in fructan composition during cold acclimation in perennial ryegrass.

scientific article published on 12 May 2015

Fungal Endophyte Colonization Patterns Alter Over Time in the Novel Association Between Lolium perenne and Epichloë Endophyte AR37

scientific article published on 29 October 2020

Genome wide allele frequency fingerprints (GWAFFs) of populations via genotyping by sequencing

scientific article

Genomic dissection and prediction of heading date in perennial ryegrass

scientific article published on 11 November 2015

Genomic prediction of starch content and chipping quality in tetraploid potato using genotyping-by-sequencing.

scientific article published on 13 July 2017

In Silico Identification of Candidate Genes for Fertility Restoration in Cytoplasmic Male Sterile Perennial Ryegrass (Lolium perenne L.).

scientific article

Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat

scientific article

Large Scale Screening of Epichloë Endophytes Infecting Schedonorus pratensis and Other Forage Grasses Reveals a Relation Between Microsatellite-Based Haplotypes and Loline Alkaloid Levels.

scientific article published on 12 June 2019

Mycelial biomass and concentration of loline alkaloids driven by complex population structure in Epichloë uncinata and meadow fescue (Schedonorus pratensis)

scientific article published on 15 May 2020

Nucleotide diversity and linkage disequilibrium in 11 expressed resistance candidate genes in Lolium perenne

scientific article

On the Accuracy of Genomic Selection

scientific article

Optimized Use of Low-Depth Genotyping-by-Sequencing for Genomic Prediction Among Multi-Parental Family Pools and Single Plants in Perennial Ryegrass (Lolium perenne L.).

scientific article published on 21 March 2018

Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne

scientific article published on 21 February 2013

Overcoming challenges in variant calling: exploring sequence diversity in candidate genes for plant development in perennial ryegrass (Lolium perenne)

scientific article published on 01 February 2019

Pooled DNA sequencing to identify SNPs associated with a major QTL for bacterial wilt resistance in Italian ryegrass (Lolium multiflorum Lam.).

scientific article published on 30 November 2018

Targeted mutagenesis in ryegrass (Lolium spp.) using the CRISPR/Cas9 system

scientific article published on 15 February 2020

The Mitogenome of Norway Spruce and a Reappraisal of Mitochondrial Recombination in Plants

scientific article published on 01 January 2020

The Value of Expanding the Training Population to Improve Genomic Selection Models in Tetraploid Potato

article by Elsa Sverrisdóttir et al published 2018 in Frontiers in Plant Science

The cytosine methylation landscape of spring barley revealed by a new reduced representation bisulfite sequencing pipeline, WellMeth

scientific article published on 14 September 2020

The genome and transcriptome of perennial ryegrass mitochondria

scientific article

The genome sequence of Barbarea vulgaris facilitates the study of ecological biochemistry.

scientific article

The perennial ryegrass GenomeZipper: targeted use of genome resources for comparative grass genomics

scientific article published on 26 November 2012

Tracking the evolution of a cold stress associated gene family in cold tolerant grasses

scientific article

Transcriptional responses of Italian ryegrass during interaction with Xanthomonas translucens pv. graminis reveal novel candidate genes for bacterial wilt resistance

scientific article

Transcriptome profiling and environmental linkage to salinity across Salicornia europaea vegetation

scientific article published on 16 October 2019

Using a Candidate Gene-Based Genetic Linkage Map to Identify QTL for Winter Survival in Perennial Ryegrass

scientific article

Vernalization mediated changes in the Lolium perenne transcriptome

scientific article

Vernalization response in perennial ryegrass (Lolium perenne L.) involves orthologues of diploid wheat (Triticum monococcum) VRN1 and rice (Oryza sativa) Hd1.

scientific article published on March 2006

List of works by Torben Asp

A Gene Encoding a DUF247 Domain Protein Cosegregates with the S Self-Incompatibility Locus in Perennial Ryegrass

A synteny-based draft genome sequence of the forage grass Lolium perenne

A transcriptome map of perennial ryegrass (Lolium perenne L.).

Accuracy of Genomic Prediction in a Commercial Perennial Ryegrass Breeding Program

Allelic variation in the perennial ryegrass FLOWERING LOCUS T gene is associated with changes in flowering time across a range of populations

Association studies using family pools of outcrossing crops based on allele-frequency estimates from DNA sequencing

Auxin Binding Protein 1 Reinforces Resistance to Sugarcane Mosaic Virus in Maize

Breaking Free: The Genomics of Allopolyploidy-Facilitated Niche Expansion in White Clover

Candidate gene association mapping for winter survival and spring regrowth in perennial ryegrass.

Changes in Lolium perenne transcriptome during cold acclimation in two genotypes adapted to different climatic conditions

Comparative sequence analysis of VRN1 alleles of Lolium perenne with the co-linear regions in barley, wheat, and rice

Comparative transcriptome analysis within the Lolium/Festuca species complex reveals high sequence conservation.

Construction of two Lolium perenne BAC libraries and identification of BACs containing candidate genes for disease resistance and forage quality

De novo assembly of Agave sisalana transcriptome in response to drought stress provides insight into the tolerance mechanisms

De novo assembly of the perennial ryegrass transcriptome using an RNA-Seq strategy.

Determination of Loline Alkaloids and Mycelial Biomass in Endophyte-Infected Schedonorus Pratensis by Near-Infrared Spectroscopy and Chemometrics

EST-derived SSR markers used as anchor loci for the construction of a consensus linkage map in ryegrass (Lolium spp.).

Estimating genomic heritabilities at the level of family-pool samples of perennial ryegrass using genotyping-by-sequencing

Evidence for adaptive evolution of low-temperature stress response genes in a Pooideae grass ancestor

Expressed sequence tag-derived microsatellite markers of perennial ryegrass (Lolium perenne L.)

Flow sorting and sequencing meadow fescue chromosome 4F.

Frequency, type, and distribution of EST-SSRs from three genotypes of Lolium perenne, and their conservation across orthologous sequences of Festuca arundinacea, Brachypodium distachyon, and Oryza sativa

Fructan metabolism and changes in fructan composition during cold acclimation in perennial ryegrass.

Fungal Endophyte Colonization Patterns Alter Over Time in the Novel Association Between Lolium perenne and Epichloë Endophyte AR37

Genome wide allele frequency fingerprints (GWAFFs) of populations via genotyping by sequencing

Genomic dissection and prediction of heading date in perennial ryegrass

Genomic prediction of starch content and chipping quality in tetraploid potato using genotyping-by-sequencing.

In Silico Identification of Candidate Genes for Fertility Restoration in Cytoplasmic Male Sterile Perennial Ryegrass (Lolium perenne L.).

Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat

Large Scale Screening of Epichloë Endophytes Infecting Schedonorus pratensis and Other Forage Grasses Reveals a Relation Between Microsatellite-Based Haplotypes and Loline Alkaloid Levels.

Mycelial biomass and concentration of loline alkaloids driven by complex population structure in Epichloë uncinata and meadow fescue (Schedonorus pratensis)

Nucleotide diversity and linkage disequilibrium in 11 expressed resistance candidate genes in Lolium perenne

On the Accuracy of Genomic Selection

Optimized Use of Low-Depth Genotyping-by-Sequencing for Genomic Prediction Among Multi-Parental Family Pools and Single Plants in Perennial Ryegrass (Lolium perenne L.).

Orthology Guided Assembly in highly heterozygous crops: creating a reference transcriptome to uncover genetic diversity in Lolium perenne

Overcoming challenges in variant calling: exploring sequence diversity in candidate genes for plant development in perennial ryegrass (Lolium perenne)

Pooled DNA sequencing to identify SNPs associated with a major QTL for bacterial wilt resistance in Italian ryegrass (Lolium multiflorum Lam.).

Targeted mutagenesis in ryegrass (Lolium spp.) using the CRISPR/Cas9 system

The Mitogenome of Norway Spruce and a Reappraisal of Mitochondrial Recombination in Plants

The Value of Expanding the Training Population to Improve Genomic Selection Models in Tetraploid Potato

The cytosine methylation landscape of spring barley revealed by a new reduced representation bisulfite sequencing pipeline, WellMeth

The genome and transcriptome of perennial ryegrass mitochondria

The genome sequence of Barbarea vulgaris facilitates the study of ecological biochemistry.

The perennial ryegrass GenomeZipper: targeted use of genome resources for comparative grass genomics

Tracking the evolution of a cold stress associated gene family in cold tolerant grasses

Transcriptional responses of Italian ryegrass during interaction with Xanthomonas translucens pv. graminis reveal novel candidate genes for bacterial wilt resistance

Transcriptome profiling and environmental linkage to salinity across Salicornia europaea vegetation

Using a Candidate Gene-Based Genetic Linkage Map to Identify QTL for Winter Survival in Perennial Ryegrass

Vernalization mediated changes in the Lolium perenne transcriptome

Vernalization response in perennial ryegrass (Lolium perenne L.) involves orthologues of diploid wheat (Triticum monococcum) VRN1 and rice (Oryza sativa) Hd1.