List of works - Oscar M Rueda

A prognostic gene signature for metastasis-free survival of triple negative breast cancer patients

scientific article (publication date: 2013)

A tumor DNA complex aberration index is an independent predictor of survival in breast and ovarian cancer

scientific article

BCL11A is a triple-negative breast cancer gene with critical functions in stem and progenitor cells

scientific article

BET Inhibition as a Rational Therapeutic Strategy for Invasive Lobular Breast Cancer

scientific article published on 13 August 2019

Characterisation of PALB2 tumours through whole-exome and whole-transcriptomic analyses

scientific article published on 23 April 2021

Copynumber: Efficient algorithms for single- and multi-track copy number segmentation

scientific article

DNA copy number motifs are strong and independent predictors of survival in breast cancer

scientific article published on 02 April 2020

DNA methylation landscapes of 1538 breast cancers reveal a replication-linked clock, epigenomic instability and cis-regulation

scientific article published on 13 September 2021

EN1 Is a Transcriptional Dependency in Triple-Negative Breast Cancer Associated with Brain Metastasis

scientific article published on 25 June 2019

Endogenous purification reveals GREB1 as a key estrogen receptor regulatory factor

scientific article published on 9 February 2013

Erratum: Corrigendum: Progesterone receptor modulates ERα action in breast cancer

scientific article published in Nature

Erratum: The somatic mutation profiles of 2,433 breast cancers refine their genomic and transcriptomic landscapes

scientific article published on 6 June 2016

Genome-driven integrated classification of breast cancer validated in over 7,500 samples

scientific article

Improving breast cancer survival analysis through competition-based multidimensional modeling

scientific article

Integration of genomic, transcriptomic and proteomic data identifies two biologically distinct subtypes of invasive lobular breast cancer

scientific article

Intersect-then-combine approach: improving the performance of somatic variant calling in whole exome sequencing data using multiple aligners and callers

scientific article

Landscape of G-quadruplex DNA structural regions in breast cancer

scientific article published on 03 August 2020

Landscapes of cellular phenotypic diversity in breast cancer xenografts and their impact on drug response

scientific article published on 31 March 2021

Master regulators of FGFR2 signalling and breast cancer risk

scientific article published on January 2013

Multi-omic machine learning predictor of breast cancer therapy response

scientific article published on 07 December 2021

Multifocal clonal evolution characterized using circulating tumour DNA in a case of metastatic breast cancer

scientific article

NRG1 fusions in breast cancer

scientific article published on 07 January 2021

Progesterone receptor modulates ERα action in breast cancer

scientific article

Quantitative image analysis of cellular heterogeneity in breast tumors complements genomic profiling

scientific article

Robust BRCA1-like classification of copy number profiles of samples repeated across different datasets and platforms

scientific article published on 20 March 2015

Shallow whole genome sequencing for robust copy number profiling of formalin-fixed paraffin-embedded breast cancers.

scientific article published on 30 March 2018

Systematic analysis of challenge-driven improvements in molecular prognostic models for breast cancer

scientific article

TP53 mutation spectrum in breast cancer is subtype specific and has distinct prognostic relevance

scientific article published on 6 May 2014

The clonal and mutational evolution spectrum of primary triple-negative breast cancers

scientific article (publication date: 4 April 2012)

The molecular landscape of Asian breast cancers reveals clinically relevant population-specific differences

scientific article published on 22 December 2020

The somatic mutation profiles of 2,433 breast cancers refines their genomic and transcriptomic landscapes

scientific article

ZNF703 is a common Luminal B breast cancer oncogene that differentially regulates luminal and basal progenitors in human mammary epithelium

scientific article

List of works by Oscar M Rueda

A prognostic gene signature for metastasis-free survival of triple negative breast cancer patients

A tumor DNA complex aberration index is an independent predictor of survival in breast and ovarian cancer

BCL11A is a triple-negative breast cancer gene with critical functions in stem and progenitor cells

BET Inhibition as a Rational Therapeutic Strategy for Invasive Lobular Breast Cancer

Characterisation of PALB2 tumours through whole-exome and whole-transcriptomic analyses

Copynumber: Efficient algorithms for single- and multi-track copy number segmentation

DNA copy number motifs are strong and independent predictors of survival in breast cancer

DNA methylation landscapes of 1538 breast cancers reveal a replication-linked clock, epigenomic instability and cis-regulation

EN1 Is a Transcriptional Dependency in Triple-Negative Breast Cancer Associated with Brain Metastasis

Endogenous purification reveals GREB1 as a key estrogen receptor regulatory factor

Erratum: Corrigendum: Progesterone receptor modulates ERα action in breast cancer

Erratum: The somatic mutation profiles of 2,433 breast cancers refine their genomic and transcriptomic landscapes

Genome-driven integrated classification of breast cancer validated in over 7,500 samples

Improving breast cancer survival analysis through competition-based multidimensional modeling

Integration of genomic, transcriptomic and proteomic data identifies two biologically distinct subtypes of invasive lobular breast cancer

Intersect-then-combine approach: improving the performance of somatic variant calling in whole exome sequencing data using multiple aligners and callers

Landscape of G-quadruplex DNA structural regions in breast cancer

Landscapes of cellular phenotypic diversity in breast cancer xenografts and their impact on drug response

Master regulators of FGFR2 signalling and breast cancer risk

Multi-omic machine learning predictor of breast cancer therapy response

Multifocal clonal evolution characterized using circulating tumour DNA in a case of metastatic breast cancer

NRG1 fusions in breast cancer

Progesterone receptor modulates ERα action in breast cancer

Quantitative image analysis of cellular heterogeneity in breast tumors complements genomic profiling

Robust BRCA1-like classification of copy number profiles of samples repeated across different datasets and platforms

Shallow whole genome sequencing for robust copy number profiling of formalin-fixed paraffin-embedded breast cancers.

Systematic analysis of challenge-driven improvements in molecular prognostic models for breast cancer

TP53 mutation spectrum in breast cancer is subtype specific and has distinct prognostic relevance

The clonal and mutational evolution spectrum of primary triple-negative breast cancers

The molecular landscape of Asian breast cancers reveals clinically relevant population-specific differences

The somatic mutation profiles of 2,433 breast cancers refines their genomic and transcriptomic landscapes

ZNF703 is a common Luminal B breast cancer oncogene that differentially regulates luminal and basal progenitors in human mammary epithelium