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List of works by Ulrike Mäder

A comprehensive proteomics and transcriptomics analysis of Bacillus subtilis salt stress adaptation

scientific article

A dual-function sRNA from B. subtilis: SR1 acts as a peptide encoding mRNA on the gapA operon.

scientific article

A global Staphylococcus aureus proteome resource applied to the in vivo characterization of host-pathogen interactions

scientific article published on 8 September 2017

Adaptation of Bacillus subtilis carbon core metabolism to simultaneous nutrient limitation and osmotic challenge: a multi-omics perspective

scientific article published on 31 March 2014

Adaptive immune response to lipoproteins of Staphylococcus aureus in healthy subjects

scientific article published on 21 June 2016

AureoWiki ̵ The repository of the Staphylococcus aureus research and annotation community

scientific article

Comprehensive absolute quantification of the cytosolic proteome of Bacillus subtilis by data independent, parallel fragmentation in liquid chromatography/mass spectrometry (LC/MS(E))

scientific article

Comprehensive identification and quantification of microbial transcriptomes by genome-wide unbiased methods ⬇️

scientific article published on November 10, 2010

Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis

scientific article

Connecting parts with processes: SubtiWiki and SubtiPathways integrate gene and pathway annotation for Bacillus subtilis

scientific article published on 3 December 2009

Daptomycin versus Friulimicin B: in-depth profiling of Bacillus subtilis cell envelope stress responses

scientific article (publication date: April 2009)

Defining the structure of the general stress regulon of Bacillus subtilis using targeted microarray analysis and random forest classification

scientific article published on 15 December 2011

Deletion of membrane-associated Asp23 leads to upregulation of cell wall stress genes in Staphylococcus aureus

article

Environmental salinity determines the specificity and need for Tat-dependent secretion of the YwbN protein in Bacillus subtilis.

scientific article

Essentiality of c-di-AMP in Bacillus subtilis: Bypassing mutations converge in potassium and glutamate homeostasis

scientific article published on 22 January 2021

Extensive alterations of the whole-blood transcriptome are associated with body mass index: results of an mRNA profiling study involving two large population-based cohorts

scientific article published on 15 October 2015

Genome-wide responses to carbonyl electrophiles in Bacillus subtilis: control of the thiol-dependent formaldehyde dehydrogenase AdhA and cysteine proteinase YraA by the MerR-family regulator YraB (AdhR).

scientific article published on 23 December 2008

Genome-wide transcriptional profiling of the Bacillus subtilis cold-shock response

scientific article published in November 2002

Global analysis of the impact of linezolid onto virulence factor production in S. aureus USA300.

scientific article published on 17 February 2016

Global impact of protein arginine phosphorylation on the physiology of Bacillus subtilis

scientific article

Impact of high salinity and the compatible solute glycine betaine on gene expression of Bacillus subtilis

scientific article published on 17 May 2020

In-depth profiling of the LiaR response of Bacillus subtilis.

scientific article published on 16 July 2010

Inducible expression of (pp)pGpp synthetases in Staphylococcus aureus is associated with activation of stress response genes

scientific article published on 30 December 2020

Inhibition of Rho Activity Increases Expression of SaeRS-Dependent Virulence Factor Genes in Staphylococcus aureus, Showing a Link between Transcription Termination, Antibiotic Action, and Virulence

article

Investigation of the Staphylococcus aureus GraSR Regulon Reveals Novel Links to Virulence, Stress Response and Cell Wall Signal Transduction Pathways ⬇️

scientific article published on January 1, 2011

Iron-responsive regulation of the Helicobacter pylori iron-cofactored superoxide dismutase SodB is mediated by Fur

scientific article

Large-scale reduction of the Bacillus subtilis genome: consequences for the transcriptional network, resource allocation, and metabolism

scientific article

Phenotype enhancement screen of a regulatory spx mutant unveils a role for the ytpQ gene in the control of iron homeostasis

scientific article

RNA degradation in Bacillus subtilis: an interplay of essential endo- and exoribonucleases

scientific article published on 08 May 2012

Regulation of the arginine deiminase system by ArgR2 interferes with arginine metabolism and fitness of Streptococcus pneumoniae

scientific article

S-bacillithiolation protects against hypochlorite stress in Bacillus subtilis as revealed by transcriptomics and redox proteomics

scientific article

Second Messenger Signaling in Bacillus subtilis: Accumulation of Cyclic di-AMP Inhibits Biofilm Formation

scientific article published on 25 May 2016

Signatures of cytoplasmic proteins in the exoproteome distinguish community- and hospital-associated methicillin-resistant Staphylococcus aureus USA300 lineages.

scientific article published on 5 May 2017

Small regulatory RNA-induced growth rate heterogeneity of Bacillus subtilis

scientific article (publication date: March 2015)

Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions

scientific article

SubtiWiki 2.0--an integrated database for the model organism Bacillus subtilis

scientific article

SubtiWiki--a comprehensive community resource for the model organism Bacillus subtilis

scientific article

Synthesis of the compatible solute proline by Bacillus subtilis: point mutations rendering the osmotically controlled proHJ promoter hyperactive

scientific article

Systems-wide temporal proteomic profiling in glucose-starved Bacillus subtilis ⬇️

scientific article

The WalKR System Controls Major Staphylococcal Virulence Genes and Is Involved in Triggering the Host Inflammatory Response ⬇️

scientific article published on July 23, 2012

The rhamnolipid stress response of Bacillus subtilis ⬇️

scientific article published on August 24, 2011

Transcriptional organization and posttranscriptional regulation of the Bacillus subtilis branched-chain amino acid biosynthesis genes

scientific article published on April 2004

Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways

scientific article published in April 2003

Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability

scientific article published on August 2002

Translation elicits a growth rate-dependent, genome-wide, differential protein production in Bacillus subtilis.

scientific article

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