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List of works by Monica Munoz-Torres

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Functional and evolutionary insights from the genomes of three parasitoid Nasonia species

scientific article
Web Apollo: a web-based genomic annotation editing platform

scientific article (publication date: 30 August 2013)
Finding the missing honey bee genes: lessons learned from a genome upgrade

scientific article
JBrowse: a dynamic web platform for genome visualization and analysis

scientific article published on 12 April 2016
The genomes of two key bumblebee species with primitive eusocial organization

scientific article
Draft genome of the red harvester ant Pogonomyrmex barbatus

scientific article
Molecular traces of alternative social organization in a termite genome.

scientific article
Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera

scientific article
The Bee Microbiome: Impact on Bee Health and Model for Evolution and Ecology of Host-Microbe Interactions

scientific article
Whole genome analysis of a schistosomiasis-transmitting freshwater snail.

scientific article published on 16 May 2017
WikiGenomes: an open Web application for community consumption and curation of gene annotation data in Wikidata

scientific article
The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species

scientific article
A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae).

scientific article published on 31 January 2018
The Toxicogenome of Hyalella azteca: A Model for Sediment Ecotoxicology and Evolutionary Toxicology

scientific article published on 10 April 2018
Apollo: Democratizing genome annotation

scientific article from PLOS Computational Biology
The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water

scientific article published on 21 November 2018
Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome

scientific article published on 02 April 2019
Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

scientific article published in January 2017
Recent advances in biocuration: meeting report from the Fifth International Biocuration Conference

scientific article (publication date: 2012)
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture

article
Corrigendum: Whole genome analysis of a schistosomiasis-transmitting freshwater snail

scientific article published on 23 August 2017
Get GO! Retrieving GO Data Using AmiGO, QuickGO, API, Files, and Tools

scientific article
A quick guide for student-driven community genome annotation

scientific article published on 03 April 2019
Erratum to: The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species.

scientific article published on 18 January 2017
The Genomic Basis of Arthropod Diversity

article published in 2018
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species

scientific article published on 01 January 2020
The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water

article published in 2018
KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

scientific article published on 9 November 2020
A Simple Standard for Sharing Ontological Mappings (SSSOM)

preprint published on 15 December 2021
The Hymenoptera Genome Database

scholarly article by Monica Munoz-Torres et al published 5 November 2010 in Nature Precedings
Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome

Gene content evolution in the arthropods

scientific article published on 23 January 2020
Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest

scientific article published on 14 March 2020
Improved annotation of the insect vector of citrus greening disease: biocuration by a diverse genomics community

scientific article published on 01 January 2019
The Human Phenotype Ontology in 2024: phenotypes around the world

scientific article published in 2023
Representing glycophenotypes: semantic unification of glycobiology resources for disease discovery

scientific article published on 01 January 2019
Mondo: Unifying diseases for the world, by the world

Ten quick tips for biocuration

scientific article published on 02 May 2019
The 2017 Bioinformatics Open Source Conference (BOSC).

scientific article published on 19 October 2017
Sawfly genomes reveal evolutionary acquisitions that fostered the mega-radiation of parasitoid and eusocial Hymenoptera

scientific article published on 22 May 2020
KG-COVID-19: a framework to produce customized knowledge graphs for COVID-19 response

scientific article published on 18 August 2020
Mondo: integrating disease terminology across communities

scientific article published on 6 October 2025
The Human Phenotype Ontology in 2021

scientific article published on 02 December 2020
The 2015 Bioinformatics Open Source Conference (BOSC 2015)

scientific article
BOSC 2021, the 22nd Annual Bioinformatics Open Source Conference

scientific article published in 2021
KG-Hub -- Building and Exchanging Biological Knowledge Graphs

preprint published in 2023
The 21st annual Bioinformatics Open Source Conference (BOSC 2020, part of BCC2020)

scientific article published on 21 September 2020
BOSC 2022: the first hybrid and 23rd annual Bioinformatics Open Source Conference

scientific article published in 2022
The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

The Ontology of Biological Attributes (OBA) - Computational Traits for the Life Sciences

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