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List of works by Dina Grohmann

A Single-Molecule View of Archaeal Transcription

scientific article published on 15 June 2019

A novel interdomain consortium from a Costa Rican oil well composed of Methanobacterium cahuitense sp. nov. and Desulfomicrobium aggregans sp. nov. ⬇️

scientific article published on 13 April 2023

A prokaryotic twist on argonaute function

scientific article

A starting point for fluorescence-based single-molecule measurements in biomolecular research.

scientific article published on 30 September 2014

Aptamer displacement identifies alternative small-molecule target sites that escape viral resistance

scientific article published on July 2007

Archaeology of RNA polymerase: factor swapping during the transcription cycle.

scientific article published on February 2013

Breaking the concentration limit of optical single-molecule detection.

scientific article published on 10 September 2013

Complete architecture of the archaeal RNA polymerase open complex from single-molecule FRET and NPS.

scientific article

Cycling through transcription with the RNA polymerase F/E (RPB4/7) complex: structure, function and evolution of archaeal RNA polymerase

scientific article published on 21 September 2010

DNA origami as biocompatible surface to match single-molecule and ensemble experiments ⬇️

scientific article published on April 20, 2012

DNA origami-based single-molecule force spectroscopy elucidates RNA Polymerase III pre-initiation complex stability

scientific article published on 05 June 2020

DNA-silencing by prokaryotic Argonaute proteins adds a new layer of defence against invading nucleic acids

scientific article published on 20 March 2018

Displacement of the transcription factor B reader domain during transcription initiation

Enhancing single-molecule fluorescence with nanophotonics

scientific article

Eukaryotic and archaeal TBP and TFB/TF(II)B follow different promoter DNA bending pathways

scientific article

Evaluation and optimisation of unnatural amino acid incorporation and bioorthogonal bioconjugation for site-specific fluorescent labelling of proteins expressed in mammalian cells

Evolution of multisubunit RNA polymerases in the three domains of life.

scientific article published on February 2011

FRET (fluorescence resonance energy transfer) sheds light on transcription

scientific article published on 01 January 2011

Fluorescently labeled recombinant RNAP system to probe archaeal transcription initiation.

scientific article published on 22 April 2015

Guide-independent DNA cleavage by archaeal Argonaute from Methanocaldococcus jannaschii.

scientific article published on 20 March 2017

HIV-1 nucleocapsid traps reverse transcriptase on nucleic acid substrates

scientific article published on 24 October 2008

Hold on!: RNA polymerase interactions with the nascent RNA modulate transcription elongation and termination.

scientific article published on 26 May 2010

Lytic water dynamics reveal evolutionarily conserved mechanisms of ATP hydrolysis by TIP49 AAA+ ATPases.

scientific article published on 06 March 2014

Making connections--strategies for single molecule fluorescence biophysics

scientific article published on 13 June 2013

Mechanistic Insights into Archaeal and Human Argonaute Substrate Binding and Cleavage Properties

scientific article

Mechanistic insights into Lhr helicase function in DNA repair

scientific article published on 24 July 2020

Methanofollis propanolicus sp. nov., a novel archaeal isolate from a Costa Rican oil well that uses propanol for methane production

scientific article published in 2022

Modern biophysical approaches probe transcription-factor-induced DNA bending and looping ⬇️

scientific article published on February 1, 2013

Molecular Mechanisms of Transcription Initiation-Structure, Function, and Evolution of TFE/TFIIE-Like Factors and Open Complex Formation.

scientific article published on 20 April 2016

Molecular force spectroscopy with a DNA origami-based nanoscopic force clamp.

scientific article published on October 2016

Molecular mechanisms of Bdp1 in TFIIIB assembly and RNA polymerase III transcription initiation

scientific article

Molecular mechanisms of RNA polymerase--the F/E (RPB4/7) complex is required for high processivity in vitro.

scientific article published on 11 November 2009

Molecular mechanisms of archaeal RNA polymerase.

scientific article published in February 2009

Nanopore sequencing of RNA and cDNA molecules in <i>Escherichia coli</i>

scientific article published in 2021

Next Generation DNA-Seq and Differential RNA-Seq Allow Re-annotation of the Pyrococcus furiosus DSM 3638 Genome and Provide Insights Into Archaeal Antisense Transcription

scientific article published on 12 July 2019

Opposed steric constraints in human DNA polymerase beta and E. coli DNA polymerase I.

scientific article

Orthogonal spin labeling using click chemistry for in vitro and in vivo applications

scientific article

RNA-Binding to Archaeal RNA Polymerase Subunits F/E: A DEER and FRET Study

scientific article published on 01 May 2010

RNAP subunits F/E (RPB4/7) are stably associated with archaeal RNA polymerase: using fluorescence anisotropy to monitor RNAP assembly in vitro

scientific article published on 15 July 2009

Recent advances in the understanding of archaeal transcription.

scientific article published on 17 May 2011

Repression of RNA polymerase by the archaeo-viral regulator ORF145/RIP.

scientific article

Same same but different: The evolution of TBP in archaea and their eukaryotic offspring

scientific article published on 8 February 2017

Simulation vs. reality: a comparison of in silico distance predictions with DEER and FRET measurements

scientific article

Single-molecule FRET supports the two-state model of Argonaute action.

scientific article published on 20 December 2013

Site-Specific Fluorescent Labeling of Argonaute for FRET-Based Bio-Assays

scientific article published in January 2017

Site-specific labelling of native mammalian proteins for single-molecule FRET measurements.

scientific article published on 2 February 2018

Small molecule inhibitors targeting HIV-1 reverse transcriptase dimerization

scientific article published in April 2008

Specific binding of a hexanucleotide to HIV-1 reverse transcriptase: a novel class of bioactive molecules

scientific article published on 12 October 2006

Spt4/5 stimulates transcription elongation through the RNA polymerase clamp coiled-coil motif

scientific article

Structural and functional insights into the fly microRNA biogenesis factor Loquacious

scientific article published on 14 January 2016

Structural and mechanistic insights into an archaeal DNA-guided Argonaute protein

scientific article published on 20 March 2017

Structure and Function of RNA Polymerases and the Transcription Machineries

scientific article published in January 2017

Superresolution microscopy with transient binding

scientific article

TFE and Spt4/5 open and close the RNA polymerase clamp during the transcription cycle

scientific article published on 15 March 2016

The HCF136 protein is essential for assembly of the photosystem II reaction center in Arabidopsis thaliana

scientific article published on 01 December 2002

The initiation factor TFE and the elongation factor Spt4/5 compete for the RNAP clamp during transcription initiation and elongation

scientific article published on July 2011

Towards structural biology with super-resolution microscopy

scientific article published on 01 September 2018

Transcription initiation factor TBP: old friend new questions

scientific article published on 01 February 2019

Tunable reagents for multi-functional bioconjugation: reversible or permanent chemical modification of proteins and peptides by control of maleimide hydrolysis ⬇️

scientific article published on April 5, 2011

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