List of works - Vincent B Chen

Assessment of detailed conformations suggests strategies for improving cryoEM models: Helix at lower resolution, ensembles, pre-refinement fixups, and validation at multi-residue length scale

CERES: a cryo-EM re-refinement system for continuous improvement of deposited models

scientific article published on 01 January 2021

Graphical tools for macromolecular crystallography in PHENIX

scientific article

KING (Kinemage, Next Generation): a versatile interactive molecular and scientific visualization program

scientific article

KinImmerse: Macromolecular VR for NMR ensembles

scientific article

Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix

scientific article published on 02 October 2019

Model validation: local diagnosis, correction and when to quit.

scientific article published in February 2018

MolProbity: More and better reference data for improved all-atom structure validation

scientific article published on 25 October 2017

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

scientific article

MolProbity: all-atom structure validation for macromolecular crystallography

scientific article

New tools in MolProbity validation: CaBLAM for CryoEM backbone, UnDowser to rethink "waters," and NGL Viewer to recapture online 3D graphics

scientific article published on 10 December 2019

PHENIX: a comprehensive Python-based system for macromolecular structure solution

scientific article

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

scientific article

The Phenix software for automated determination of macromolecular structures

scientific article (publication date: September 2011)

The other 90% of the protein: assessment beyond the Calphas for CASP8 template-based and high-accuracy models

scientific article

Use of knowledge-based restraints in phenix.refine to improve macromolecular refinement at low resolution

scientific article published on 16 March 2012

phenix.model_vs_data: a high-level tool for the calculation of crystallographic model and data statistics

scientific article

List of works by Vincent B Chen

Assessment of detailed conformations suggests strategies for improving cryoEM models: Helix at lower resolution, ensembles, pre-refinement fixups, and validation at multi-residue length scale

CERES: a cryo-EM re-refinement system for continuous improvement of deposited models

Graphical tools for macromolecular crystallography in PHENIX

KING (Kinemage, Next Generation): a versatile interactive molecular and scientific visualization program

KinImmerse: Macromolecular VR for NMR ensembles

Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix

Model validation: local diagnosis, correction and when to quit.

MolProbity: More and better reference data for improved all-atom structure validation

MolProbity: all-atom contacts and structure validation for proteins and nucleic acids

MolProbity: all-atom structure validation for macromolecular crystallography

New tools in MolProbity validation: CaBLAM for CryoEM backbone, UnDowser to rethink "waters," and NGL Viewer to recapture online 3D graphics

PHENIX: a comprehensive Python-based system for macromolecular structure solution

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

The Phenix software for automated determination of macromolecular structures

The other 90% of the protein: assessment beyond the Calphas for CASP8 template-based and high-accuracy models

Use of knowledge-based restraints in phenix.refine to improve macromolecular refinement at low resolution

phenix.model_vs_data: a high-level tool for the calculation of crystallographic model and data statistics