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List of works by Stephen D Bentley

A mosaic tetracycline resistance gene tet(S/M) detected in an MDR pneumococcal CC230 lineage that underwent capsular switching in South Africa

scientific article published in March 2020

Bacterial genome-wide association study of hyper-virulent pneumococcal serotype 1 identifies genetic variation associated with neurotropism

scientific article published on 08 October 2020

Early signals of vaccine driven perturbation seen in pneumococcal carriage population genomic data

article

Evolution and Global Transmission of a Multidrug-Resistant, Community-Associated Methicillin-Resistant Staphylococcus aureus Lineage from the Indian Subcontinent

scientific article published on 26 November 2019

Fast and flexible bacterial genomic epidemiology with PopPUNK

scientific article published on 24 January 2019

Global emergence and population dynamics of divergent serotype 3 CC180 pneumococci

scientific article published on 26 November 2018

Horizontal gene transfer rate is not the primary determinant of observed antibiotic resistance frequencies in Streptococcus pneumoniae

scientific article published on 20 May 2020

International genomic definition of pneumococcal lineages, to contextualise disease, antibiotic resistance and vaccine impact

scientific article published on 16 April 2019

Joint sequencing of human and pathogen genomes reveals the genetics of pneumococcal meningitis

scientific article published on 15 May 2019

Pneumococcal capsule synthesis locus cps as evolutionary hotspot with potential to generate novel serotypes by recombination.

scientific article published on 08 June 2017

Pneumococcal lineages associated with serotype replacement and antibiotic resistance in childhood invasive pneumococcal disease in the post-PCV13 era: an international whole-genome sequencing study

scientific article published on 10 June 2019

Population genomics of Group B Streptococcus reveals the genetics of neonatal disease onset and meningeal invasion

scientific article published in 2022

Putative novel cps loci in a large global collection of pneumococci

scientific article published on 11 June 2019

The role of interspecies recombination in the evolution of antibiotic-resistant pneumococci

scientific article published on 14 July 2021

Visualizing variation within Global Pneumococcal Sequence Clusters (GPSCs) and country population snapshots to contextualize pneumococcal isolates

scientific article published on 30 April 2020

Within-host microevolution of Streptococcus pneumoniae is rapid and adaptive during natural colonisation

scientific article published on 10 July 2020