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List of works by James F. Holden

Alterations of the human gut microbiome in multiple sclerosis.

scientific article published on 28 June 2016

Bioinformatic and biochemical analysis of a novel maltose-forming α-amylase of the GH57 family in the hyperthermophilic archaeon Thermococcus sp. CL1.

scientific article published on 30 March 2014

Biological iron-sulfur storage in a thioferrate-protein nanoparticle

scientific article published on 20 July 2017

Broad substrate specificity of a hyperthermophilic α-glucosidase from Pyrobaculum arsenaticum

scientific article published on 31 December 2016

Complete genome sequence of the hyperthermophilic archaeon Pyrococcus sp. strain ST04, isolated from a deep-sea hydrothermal sulfide chimney on the Juan de Fuca Ridge

scientific article

Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain CL1, isolated from a Paralvinella sp. polychaete worm collected from a hydrothermal vent

scientific article

Complete genome sequence of the hyperthermophilic methanogen Methanocaldococcus bathoardescens JH146(T) isolated from the basalt subseafloor

scientific article published on 18 June 2015

Draft Genome Sequence of Desulfurobacterium thermolithotrophum Strain HR11, a Novel Thermophilic Autotrophic Subspecies from a Deep-Sea Hydrothermal Vent

scientific article published on 26 March 2020

Ecology, Diversity, and Temperature-Pressure Adaptation of the Deep-Sea Hyperthermophilic Archaea Thermococcales ⬇️

doctoral thesis by James Francis Holden, 1996

Fluid geochemistry, local hydrology, and metabolic activity define methanogen community size and composition in deep-sea hydrothermal vents

scientific article published on 06 March 2019

Formate hydrogenlyase and formate secretion ameliorate H2 inhibition in the hyperthermophilic archaeon Thermococcus paralvinellae

scientific article published on 13 December 2017

Growth Kinetics, Carbon Isotope Fractionation, and Gene Expression in the Hyperthermophile during Hydrogen-Limited Growth and Interspecies Hydrogen Transfer

article

Growth kinetics and energetics of a deep-sea hyperthermophilic methanogen under varying environmental conditions

scientific article published on 6 May 2013

Hydrogen Limitation and Syntrophic Growth among Natural Assemblages of Thermophilic Methanogens at Deep-sea Hydrothermal Vents

scientific article

Hydrogen Production and Enzyme Activities in the Hyperthermophile Thermococcus paralvinellae Grown on Maltose, Tryptone, and Agricultural Waste

scientific article published on 23 February 2016

Hydrogen and thiosulfate limits for growth of a thermophilic, autotrophic Desulfurobacterium species from a deep-sea hydrothermal vent

scientific article published on 23 December 2015

Hydrogen-limited growth of hyperthermophilic methanogens at deep-sea hydrothermal vents

scientific article published on 6 August 2012

Hydrothermal Chimney Distribution on the Endeavour Segment, Juan de Fuca Ridge

scientific article

Identification and characterization of an archaeal kojibiose catabolic pathway in the hyperthermophilic Pyrococcus sp. strain ST04.

scientific article published on 03 January 2014

Maltose-forming α-amylase from the hyperthermophilic archaeon Pyrococcus sp. ST04.

scientific article published on 25 July 2013

Methane cycling. Nonequilibrium clumped isotope signals in microbial methane

scientific article

Methanocaldococcus bathoardescens sp. nov., a hyperthermophilic methanogen isolated from a volcanically active deep-sea hydrothermal vent

scientific article published on 29 January 2015

Microbe-Mineral Interaction and Novel Proteins for Iron Oxide Mineral Reduction in the Hyperthermophilic Crenarchaeon <i>Pyrodictium delaneyi</i>

scientific article published on 08 January 2021

Production of Hydrogen from α-1,4- and β-1,4-Linked Saccharides by Marine Hyperthermophilic Archaea ⬇️

scientific article published on March 18, 2011

Pyrodictium delaneyi sp. nov., a hyperthermophilic autotrophic archaeon that reduces Fe(III) oxide and nitrate

scientific article

Reduction and Morphological Transformation of Synthetic Nanophase Iron Oxide Minerals by Hyperthermophilic Archaea

scientific article published on 11 July 2018

Seafloor Incubation Experiment with Deep-Sea Hydrothermal Vent Fluid Reveals Effect of Pressure and Lag Time on Autotrophic Microbial Communities

scientific article

Spectral and morphological characteristics of synthetic nanophase iron (oxyhydr)oxides

scientific article published on 19 May 2017

Structural features underlying the selective cleavage of a novel exo-type maltose-forming amylase from Pyrococcus sp. ST04

scientific article

Thermococcus paralvinellae sp. nov. and Thermococcus cleftensis sp. nov. of hyperthermophilic heterotrophs from deep-sea hydrothermal vents

scientific article

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