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List of works by Kenya Honda

A critical link between Toll-like receptor 3 and type II interferon signaling pathways in antiviral innate immunity

scholarly article

A defined commensal consortium elicits CD8 T cells and anti-cancer immunity

scientific article published on 23 January 2019

A selective contribution of the RIG-I-like receptor pathway to type I interferon responses activated by cytosolic DNA.

scientific article published on October 2009

A subpopulation of high IL-21-producing CD4(+) T cells in Peyer's Patches is induced by the microbiota and regulates germinal centers.

scientific article published on 08 August 2016

ATP drives lamina propria T(H)17 cell differentiation

scientific article

Altered microbiota composition reflects enhanced communication in 15q11-13 CNV mice

scientific article published on 18 December 2019

Author Correction: Microbiota modulate sympathetic neurons via a gut-brain circuit

scientific article published on 20 August 2020

Beneficial innate signaling interference for antibacterial responses by a Toll-like receptor-mediated enhancement of the MKP-IRF3 axis.

scientific article

Can we harness the microbiota to enhance the efficacy of cancer immunotherapy?

scientific article published on 13 July 2020

Characterization of the 17 strains of regulatory T cell-inducing human-derived Clostridia

scientific article

Clarithromycin expands CD11b+Gr-1+ cells via the STAT3/Bv8 axis to ameliorate lethal endotoxic shock and post-influenza bacterial pneumonia.

scientific article published on 5 April 2018

Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IkappaBzeta

scientific article published on 3 March 2008

Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IκBζ.

scientific article published in February 2015

Class-specific regulation of pro-inflammatory genes by MyD88 pathways and IκBζ.

scientific article published in September 2015

Clinical Efficacy of Prebiotics on Transplant-Related Complications ⬇️

scholarly article

Clinical impact of pre-transplant gut microbial diversity on outcomes of allogeneic hematopoietic stem cell transplantation.

scientific article

Commensal bacteria at the crossroad between cholesterol homeostasis and chronic inflammation in atherosclerosis.

scientific article published on 27 January 2017

Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells

scientific article (publication date: 19 December 2013)

Complete Genome Sequence of Parascardovia denticolens JCM 12538T, Isolated from Human Dental Caries

scientific article published on 14 May 2015

Complete Genome Sequence of Scardovia inopinata JCM 12537T, Isolated from Human Dental Caries

scientific article published on 14 May 2015

Complete genome sequence of Bifidobacterium angulatum JCM 7096(T) isolated from human feces

scientific article published on 30 June 2015

Complete genome sequence of Bifidobacterium bifidum JCM 1255(T) isolated from feces of a breast-fed infant

scientific article

Complete genome sequence of Bifidobacterium breve JCM 1192(T) isolated from infant feces

scientific article

Complete genome sequence of Bifidobacterium catenulatum JCM 1194(T) isolated from human feces

scientific article

Complete genome sequence of Bifidobacterium pseudocatenulatum JCM 1200(T) isolated from infant feces

scientific article

Computer-guided design of optimal microbial consortia for immune system modulation

scientific article published on 17 April 2018

Contribution of IRF5 in B cells to the development of murine SLE-like disease through its transcriptional control of the IgG2a locus

scientific article

Cooperation between MyD88 and TRIF pathways in TLR synergy via IRF5 activation

scientific article

Corrigendum: A subpopulation of high IL-21-producing CD4(+) T cells in Peyer's Patches is induced by the microbiota and regulates germinal centers

scientific article published on 10 October 2016

Corrigendum: Gut microbiome-derived metabolites modulate intestinal epithelial cell damage and mitigate graft-versus-host disease

scientific article published on 01 September 2016

Cross-interference of RLR and TLR signaling pathways modulates antibacterial T cell responses ⬇️

scientific article published on May 20, 2012

DAI (DLM-1/ZBP1) is a cytosolic DNA sensor and an activator of innate immune response

scientific article

Development and maintenance of intestinal regulatory T cells

scientific article

Diet Diurnally Regulates Small Intestinal Microbiome-Epithelial-Immune Homeostasis and Enteritis

scientific article published on 02 September 2020

Diet-dependent, microbiota-independent regulation of IL-10-producing lamina propria macrophages in the small intestine.

scientific article published on 15 June 2016

Dysbiosis and compositional alterations with aging in the gut microbiota of patients with heart failure

scientific article

Ecto-nucleoside triphosphate diphosphohydrolase 7 controls Th17 cell responses through regulation of luminal ATP in the small intestine

scientific article published on 14 December 2012

Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation

scientific article published in October 2017

Endocytosis of commensal antigens by intestinal epithelial cells regulates mucosal T cell homeostasis

scientific article published on 01 March 2019

Endogenous murine microbiota member Faecalibaculum rodentium and its human homologue protect from intestinal tumour growth

scientific article published on 27 January 2020

Erratum: Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells

scientific article published in Nature

Erratum: Corrigendum: Obesity-induced gut microbial metabolite promotes liver cancer through senescence secretome

scholarly article published in Nature

Essential contribution of IRF3 to intestinal homeostasis and microbiota-mediated Tslp gene induction

scientific article

Essential role of IRF-3 in lipopolysaccharide-induced interferon-beta gene expression and endotoxin shock

scientific article

Evidence for licensing of IFN-gamma-induced IFN regulatory factor 1 transcription factor by MyD88 in Toll-like receptor-dependent gene induction program

scientific article

Fecal microbiota transplantation for patients with steroid-resistant acute graft-versus-host disease of the gut.

scientific article published on 26 July 2016

Fecal microbiota transplantation with frozen capsules for a patient with refractory acute gut graft-versus-host disease

scientific article published on 01 November 2018

Foxp3(+) T cells regulate immunoglobulin a selection and facilitate diversification of bacterial species responsible for immune homeostasis

scientific article

Generation of mice deficient in RNA-binding motif protein 3 (RBM3) and characterization of its role in innate immune responses and cell growth ⬇️

scientific article published on June 12, 2011

Gut microbiome-derived metabolites modulate intestinal epithelial cell damage and mitigate graft-versus-host disease

scientific article

Gut pathobionts underlie intestinal barrier dysfunction and liver T helper 17 cell immune response in primary sclerosing cholangitis

scientific article published on 14 January 2019

HMGB proteins function as universal sentinels for nucleic-acid-mediated innate immune responses

scientific journal article

Helicobacter species are potent drivers of colonic T cell responses in homeostasis and inflammation

scientific article published on July 2017

Helminth infection promotes colonization resistance via type 2 immunity.

scientific article

Hematopoietic cell-derived interferon controls viral replication and virus-induced disease

scientific article published on 29 October 2008

Homeostatic erythropoiesis by the transcription factor IRF2 through attenuation of type I interferon signaling.

scientific article

IL-10 produced by macrophages regulates epithelial integrity in the small intestine

scientific article published in Scientific Reports

IL-10-producing CD4(+) T cells negatively regulate fucosylation of epithelial cells in the gut

scientific article

IL-22 from T Cells: Better Late than Never ⬇️

scientific article published on December 14, 2012

IRF-7 is the master regulator of type-I interferon-dependent immune responses

scientific journal article

IRF4 transcription factor-dependent CD11b+ dendritic cells in human and mouse control mucosal IL-17 cytokine responses

scientific article published on May 2013

IRFs: master regulators of signalling by Toll-like receptors and cytosolic pattern-recognition receptors

scientific article

Identification of trypsin-degrading commensals in the large intestine

scientific article published on 7 September 2022

Immune responses to gut microbiota-commensals and pathogens ⬇️

scientific article published on 07 June 2010

Immunoregulation by the gut microbiota ⬇️

scientific article published on April 22, 2012

Induction of Th17 cell differentiation in intestinal mucosa

scientific article published on June 2009

Induction of Th17 cells by intestinal microbiota

scientific article published on November 1, 2010

Induction of Th17 cells by segmented filamentous bacteria in the murine intestine.

scientific article published on 7 April 2015

Induction of Treg cells in the mouse colonic mucosa: A central mechanism to maintain host–microbiota homeostasis ⬇️

scientific article published on December 14, 2011

Induction of human regulatory innate lymphoid cells from group 2 innate lymphoid cells by retinoic acid

scientific article published on 22 January 2019

Induction of intestinal Th17 cells by segmented filamentous bacteria

scientific article (publication date: 30 October 2009)

Induction of lamina propria Th17 cells by intestinal commensal bacteria ⬇️

scientific article published on September 17, 2010

Inefficient phagosome maturation in infant macrophages

scientific article published on 08 August 2008

Insulin- and Lipopolysaccharide-Mediated Signaling in Adipose Tissue Macrophages Regulates Postprandial Glycemia through Akt-mTOR Activation

scientific article published on 20 May 2020

Integral role of IRF-5 in the gene induction programme activated by Toll-like receptors

scientific article

Integration of interferon-alpha/beta signalling to p53 responses in tumour suppression and antiviral defence.

scientific article

Intestinal Commensal Microbes as Immune Modulators ⬇️

scientific article published on October 18, 2012

Lipocalin 2-dependent inhibition of mycobacterial growth in alveolar epithelium

scientific article

MAVS-dependent IRF3/7 bypass of interferon β-induction restricts the response to measles infection in CD150Tg mouse bone marrow-derived dendritic cells

scientific article published on 4 October 2013

MDSINE: Microbial Dynamical Systems INference Engine for microbiome time-series analyses.

scientific article

MUCOSAL IMMUNOLOGY. The microbiota regulates type 2 immunity through RORγt⁺ T cells

scientific article published on 9 July 2015

Maternal gut bacteria promote neurodevelopmental abnormalities in mouse offspring

scientific article published on 13 September 2017

Microbiota Diurnal Rhythmicity Programs Host Transcriptome Oscillations

scientific article

Microbiota imbalance induced by dietary sugar disrupts immune-mediated protection from metabolic syndrome

scientific article published in 2022

Microbiota in autoimmunity and tolerance ⬇️

scientific article published on November 22, 2011

Microbiota modulate sympathetic neurons via a gut-brain circuit

scientific article published on 08 July 2020

Microbiota-Dependent Activation of an Autoreactive T Cell Receptor Provokes Autoimmunity in an Immunologically Privileged Site

scientific article

Microbiota-derived lantibiotic restores resistance against vancomycin-resistant Enterococcus

scientific article published on 21 August 2019

Microbiotal influence on T cell subset development ⬇️

scientific article published on 03 February 2011

Mining the microbiota for microbial and metabolite-based immunotherapies

scientific article published on 01 May 2019

Monocyte-derived dendritic cells perform hemophagocytosis to fine-tune excessive immune responses

scientific article published on 12 September 2013

MyD88 protects from lethal encephalitis during infection with vesicular stomatitis virus

scientific article published on September 2007

NFATc1 mediates Toll-like receptor-independent innate immune responses during Trypanosoma cruzi infection

scientific article

Negative regulation of IFN-alpha/beta signaling by IFN regulatory factor 2 for homeostatic development of dendritic cells

scholarly article

Negative regulation of Toll-like-receptor signaling by IRF-4.

scientific article

Obesity-induced gut microbial metabolite promotes liver cancer through senescence secretome

scientific article published on 26 June 2013

Optimization of Data-Independent Acquisition Mass Spectrometry for Deep and Highly Sensitive Proteomic Analysis

scientific article published on 26 November 2019

Organogenesis of peripheral lymphoid organs.

scientific article

Porphyromonas gingivalis Sinks Teeth into the Oral Microbiota and Periodontal Disease ⬇️

scientific article published on November 17, 2011

Prebiotics protect against acute graft-versus-host disease and preserve the gut microbiota in stem cell transplantation

scientific article published on 01 October 2020

Protective role of interferon regulatory factor 3-mediated signaling against prion infection.

scientific article

Regulation of the type I IFN induction: a current view

scientific article

Requirement of full TCR repertoire for regulatory T cells to maintain intestinal homeostasis

scientific article published on 29 September 2015

Role of IFN regulatory factor 5 transcription factor in antiviral immunity and tumor suppression

scholarly article

Role of a transductional-transcriptional processor complex involving MyD88 and IRF-7 in Toll-like receptor signaling

scholarly article

Selective contribution of IFN-alpha/beta signaling to the maturation of dendritic cells induced by double-stranded RNA or viral infection

scientific article

Short-chain fatty acids bind to apoptosis-associated speck-like protein to activate inflammasome complex to prevent Salmonella infection

scientific article published on 29 September 2020

Spatiotemporal regulation of MyD88-IRF-7 signalling for robust type-I interferon induction

scientific article

Suppression of immune responses by nonimmunogenic oligodeoxynucleotides with high affinity for high-mobility group box proteins (HMGBs)

scientific article

TFH-IgA responses keep microbiota in check

scientific article published on February 2015

TH1 cell-inducing Escherichia coli strain identified from the small intestinal mucosa of patients with Crohn's disease

scientific article published on 20 July 2020

Th17 Cell Induction by Adhesion of Microbes to Intestinal Epithelial Cells.

scientific article published on 22 September 2015

The contribution of transcription factor IRF1 to the interferon-gamma-interleukin 12 signaling axis and TH1 versus TH-17 differentiation of CD4+ T cells

scientific article published on 02 December 2007

The effects of oral microbiota on health

scientific article published on 27 May 2022

The epigenetic regulator Uhrf1 facilitates the proliferation and maturation of colonic regulatory T cells

scientific article

The induction of Treg cells by gut-indigenous Clostridium ⬇️

scientific article published on 04 June 2012

The microbiome in infectious disease and inflammation

scientific article published on 6 January 2012

The microbiota in adaptive immune homeostasis and disease

scientific article

The role of Irf6 in tooth epithelial invagination.

scientific article published on 14 February 2012

Toll-like receptor signaling and IRF transcription factors

scientific article (publication date: 2006)

Transcriptional reprogramming of mature CD4⁺ helper T cells generates distinct MHC class II-restricted cytotoxic T lymphocytes

scientific article published on 20 January 2013

Triggering TLR7 in mice induces immune activation and lymphoid system disruption, resembling HIV-mediated pathology

scientific article published on 29 September 2008

Two FOXP3(+)CD4(+) T cell subpopulations distinctly control the prognosis of colorectal cancers

scientific article

Type I interferon [corrected] gene induction by the interferon regulatory factor family of transcription factors

scientific article

Wild-type measles virus infection in human CD46/CD150-transgenic mice: CD11c-positive dendritic cells establish systemic viral infection.

scientific article

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