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List of works by Darren E Hagen

AgAnimalGenomes: browsers for viewing and manually annotating farm animal genomes

scientific article published in September 2023

Allele-specific aberration of imprinted domain chromosome architecture associates with large offspring syndrome

scientific article published on 20 April 2022

Altered microRNA expression profiles in large offspring syndrome and Beckwith-Wiedemann syndrome

scientific article published on 30 May 2019

Bovine Genome Database: Tools for Mining the Bos taurus Genome

scientific article published on 01 January 2018

Bovine Genome Database: integrated tools for genome annotation and discovery

scientific article

Bovine Genome Database: new annotation tools for a new reference genome

scientific article published on 01 January 2020

Bovine Genome Database: new tools for gleaning function from the Bos taurus genome

scientific article

Characterization of global loss of imprinting in fetal overgrowth syndrome induced by assisted reproduction

scientific article

Characterization of tRNA expression profiles in large offspring syndrome

scientific article published on 07 April 2022

De novo assembly of the cattle reference genome with single-molecule sequencing

scientific article published on 01 March 2020

Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile)

scientific article

Draft genome of the red harvester ant Pogonomyrmex barbatus

scientific article

Effect of food source availability in the salivary gland transcriptome of the unique burying beetle Nicrophorus pustulatus (Coleoptera: Silphidae)

scientific article published on 23 September 2021

Functional and evolutionary insights from the genomes of three parasitoid Nasonia species

scientific article

Global assessment of imprinted gene expression in the bovine conceptus by next generation sequencing

scientific article published on 31 May 2016

Global misregulation of genes largely uncoupled to DNA methylome epimutations characterizes a congenital overgrowth syndrome.

scientific article published on 4 October 2017

Hymenoptera Genome Database: Using HymenopteraMine to Enhance Genomic Studies of Hymenopteran Insects

scientific article published on 01 January 2018

Hymenoptera Genome Database: integrating genome annotations in HymenopteraMine

scientific article

Progesterone Effects on Extracellular Vesicles in the Sheep Uterus

scientific article published on 16 January 2018

RNA-seq reveals insights into molecular mechanisms of metabolic restoration via tryptophan supplementation in low birth weight piglet model

scientific article published on 01 May 2022

Social insect genomes exhibit dramatic evolution in gene composition and regulation while preserving regulatory features linked to sociality

scientific article published on May 2013

The genome sequence of taurine cattle: a window to ruminant biology and evolution

scientific article

The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle

scientific article

The genomic basis of evolutionary differentiation among honey bees

scientific article published on 04 May 2021

Using online tools at the Bovine Genome Database to manually annotate genes in the new reference genome

scientific article published on 14 June 2020