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List of works by Janet Sinsheimer

"Statistics 101"--a primer for the genetics of complex human disease

scientific article published on October 2011

A candidate gene study of intermediate histopathological phenotypes in HIV-associated neurocognitive disorders

scientific article published on 11 May 2020

A case-control study of the association of the polymorphisms and haplotypes of DNA ligase I with lung and upper-aerodigestive-tract cancers

scientific article published on April 2008

A conditional-on-exchangeable-parental-genotypes likelihood that remains unbiased at the causal locus under multiple-affected-sibling ascertainment

scientific article published on 01 July 2005

A genetic association study of single nucleotide polymorphisms in FGFR1OP2/wit3.0 and long-term atrophy of edentulous mandible.

scientific article

A genomewide screen for autism-spectrum disorders: evidence for a major susceptibility locus on chromosome 3q25-27

scientific article

A heterozygote-homozygote test of Hardy-Weinberg equilibrium

scientific article

A high-throughput method for cloning and sequencing human immunodeficiency virus type 1 integration sites

scientific article

APOE, MAPT, and COMT and Parkinson's Disease Susceptibility and Cognitive Symptom Progression

scientific article published on 2 April 2016

ASSESSING PHENOTYPIC CORRELATION THROUGH THE MULTIVARIATE PHYLOGENETIC LATENT LIABILITY MODEL. ⬇️

scientific article published on June 2015

Acceleration of age-associated methylation patterns in HIV-1-infected adults

scientific article

Activity of Genes with Functions in Human Williams-Beuren Syndrome Is Impacted by Mobile Element Insertions in the Gray Wolf Genome.

scientific article published in June 2018

Allowing for missing data at highly polymorphic genes when testing for maternal, offspring and maternal-fetal genotype incompatibility effects

scientific article

Amerindian-specific regions under positive selection harbour new lipid variants in Latinos

scientific article

An Examination of School Reopening Strategies during the SARS-CoV-2 Pandemic

scientific article published on 06 August 2020

An exact maternal-fetal genotype incompatibility (MFG) test

scientific article published in January 2005

Applications of codon and rate variation models in molecular phylogeny

scientific article

Are you my mother? Bayesian phylogenetic inference of recombination among putative parental strains.

scientific article published on January 2003

Association of LOXL1 polymorphisms with pseudoexfoliation, glaucoma, intraocular pressure, and systemic diseases in a Greek population. The Thessaloniki eye study

scientific article

Association of genetic variation in the tachykinin receptor 3 locus with hot flashes and night sweats in the Women's Health Initiative Study

scientific article

Association of sequence variation in the CX3CR1 gene with geographic atrophy age-related macular degeneration in a Greek population

scientific article published on 20 July 2012

Association of the APOLIPOPROTEIN A1/C3/A4/A5 gene cluster with triglyceride levels and LDL particle size in familial combined hyperlipidemia

scientific article published on 4 March 2004

Association screening of common and rare genetic variants by penalized regression ⬇️

scientific article published on August 6, 2010

Association testing with Mendel.

scientific article

Associations between single nucleotide polymorphisms in double-stranded DNA repair pathway genes and familial breast cancer

scientific article published on 10 March 2009

Associations of regional amyloid-β plaque and phospho-tau pathology with biological factors and neuropsychological functioning among HIV-infected adults

scientific article published on 29 May 2019

Author Correction: Integration of human adipocyte chromosomal interactions with adipose gene expression prioritizes obesity-related genes from GWAS

scientific article published in Nature Communications

Bayesian nonparametric clustering in phylogenetics: modeling antigenic evolution in influenza

scientific article published on 18 January 2017

Bilingual Cancer Genetic Education Modules for the Deaf Community: Development and Evaluation of the Online Video Material.

scientific article

Bilingual approach to online cancer genetics education for Deaf American Sign Language users produces greater knowledge and confidence than English text only: A randomized study

scientific article

BioSimulator.jl: Stochastic simulation in Julia

scientific article published on 10 October 2018

Bootstrap confidence levels for HIV-1 recombination

scientific article published in February 2002

CCL3 genotype and current depression increase risk of HIV-associated dementia

scientific article

Characterizing bias in population genetic inferences from low-coverage sequencing data

scientific article

Comparative analysis of proteome and transcriptome variation in mouse

scientific article

Core concerns of couples living with early stage breast cancer

scientific article published on December 2006

Correction to: A candidate gene study of intermediate histopathological phenotypes in HIV-associated neurocognitive disorders

scientific article published on 06 July 2020

Cumulative effects of common genetic variants on risk of sudden cardiac death

scientific article published on June 2015

Deaf Genetic Testing and Psychological Well‐Being in Deaf Adults ⬇️

scientific article published on February 21, 2013

Deaf adults' reasons for genetic testing depend on cultural affiliation: results from a prospective, longitudinal genetic counseling and testing study

scientific article

Detecting genotype combinations that increase risk for disease: maternal-fetal genotype incompatibility test.

scientific article published in January 2003

Detection of intergenerational genetic effects with application to HLA-B matching as a risk factor for schizophrenia

scientific article published on 15 October 2011

Determining duration of HER2-targeted therapy using stem cell extinction models.

scientific article

Diagnostic utility of transcriptome sequencing for rare Mendelian diseases

scientific article published on 14 October 2019

Differential destruction of stem cells: implications for targeted cancer stem cell therapy

scientific article

Does history repeat itself? Wavelets and the phylodynamics of influenza A

scientific article published on 8 December 2011

Dopamine receptors and BDNF-haplotypes predict dyskinesia in Parkinson's disease.

scientific article published on 24 November 2017

Effect of Pre‐test Genetic Counseling for Deaf Adults on Knowledge of Genetic Testing ⬇️

scientific article published on August 5, 2011

Effect of Rhesus D incompatibility on schizophrenia depends on offspring sex.

scientific article published on 09 August 2008

Epigenetic predictor of age

scientific article

Estimating ethnic admixture from pedigree data.

scientific article

Estrogen receptor alpha and matrix metalloproteinase 2 polymorphisms and age-related maculopathy in older women

scientific article published on 20 March 2008

Exome sequencing identifies 2 rare variants for low high-density lipoprotein cholesterol in an extended family

scientific article

Expression quantitative trait loci: replication, tissue- and sex-specificity in mice

scientific article

Extinction models for cancer stem cell therapy ⬇️

scientific article published on October 6, 2011

Familial combined hyperlipidemia is associated with upstream transcription factor 1 (USF1).

scientific article published on 29 February 2004

Family genetic result communication in rare and undiagnosed disease communities: Understanding the practice

scientific article published on 27 October 2020

Fast and accurate site frequency spectrum estimation from low coverage sequence data

scientific article

Female mate preference explains countergradient variation in the sexual coloration of guppies ( Poecilia reticulata ) ⬇️

scientific article published on November 23, 2011

Feminized behavior and brain gene expression in a novel mouse model of Klinefelter Syndrome

scientific article

Filtering nucleotide sites by phylogenetic signal to noise ratio increases confidence in the Neoaves phylogeny generated from ultraconserved elements

scientific article published on 04 April 2018

Functional paraoxonase 1 variants modify the risk of Parkinson's disease due to organophosphate exposure

scientific article published on 16 April 2013

Functional polymorphisms in dopamine-related genes: effect on neurocognitive functioning in HIV+ adults.

scientific article

Galanin preproprotein is associated with elevated plasma triglycerides

scientific article

Gene-Environment Interaction in Parkinson's Disease: Coffee, ADORA2A, and CYP1A2.

scientific article

Gene-Gene Interaction in Maternal and Perinatal Research ⬇️

scientific article published on July 27, 2010

Gene-environment interactions linking air pollution and inflammation in Parkinson's disease

scientific article published on 15 September 2016

Genetic analysis of hyperemesis gravidarum reveals association with intracellular calcium release channel (RYR2).

scientific article published on 20 September 2016

Genetic association analysis of RHOB and TXNDC3 in osteoarthritis

scientific article

Genetic risk scores and hallucinations in patients with Parkinson disease

scientific article published on 20 July 2020

Genetic variability in ABCB1, occupational pesticide exposure, and Parkinson's disease

scientific article published on 09 October 2015

Genetic variants in nicotinic receptors and smoking cessation in Parkinson's disease

scientific article published on 01 February 2019

Genetic variation and hot flashes: A systematic review

scientific article published on 14 August 2020

Genome-wide ultraconserved elements exhibit higher phylogenetic informativeness than traditional gene markers in percomorph fishes

scientific article published on 12 June 2015

Genomic study in Mexicans identifies a new locus for triglycerides and refines European lipid loci

scientific article published on 15 March 2013

Graph hierarchies for phylogeography ⬇️

scientific article published on 04 February 2013

HLA-B maternal-fetal genotype matching increases risk of schizophrenia

scientific article

Head injury, α-synuclein genetic variability and Parkinson's disease

scientific article

Heritability of interpack aggression in a wild pedigreed population of North American grey wolves

scientific article published on 06 January 2020

Hierarchical Phylogenetic Models for Analyzing Multipartite Sequence Data ⬇️

scientific article published on October 1, 2003

Histone H3.3 beyond cancer: Germline mutations in <i>Histone 3 Family 3A and 3B</i> cause a previously unidentified neurodegenerative disorder in 46 patients

scientific article published on 02 December 2020

Household organophosphorus pesticide use and Parkinson's disease

scientific article published on 20 September 2013

Human Birth Weight and Reproductive Immunology: Testing for Interactions between Maternal and Offspring KIR and HLA-C Genes

scientific article published on 18 February 2017

IRF2BPL Is Associated with Neurological Phenotypes

Identification of two common variants contributing to serum apolipoprotein B levels in Mexicans

scientific article

Impact of genetic counseling and Connexin-26 and Connexin-30 testing on deaf identity and comprehension of genetic test results in a sample of deaf adults: a prospective, longitudinal study

scientific article

Inflammatory cytokine gene polymorphisms and increased risk of Parkinson disease

scientific article

Integration of human adipocyte chromosomal interactions with adipose gene expression prioritizes obesity-related genes from GWAS.

scientific article

Investigating the aspartic acid (D) repeat of asporin as a risk factor for osteoarthritis in a UK Caucasian population

scientific article published in November 2005

Investigation of variants identified in caucasian genome-wide association studies for plasma high-density lipoprotein cholesterol and triglycerides levels in Mexican dyslipidemic study samples

scientific article

Iterative hard thresholding in genome-wide association studies: Generalized linear models, prior weights, and double sparsity

scientific article published on 01 June 2020

Long-term survivors in Nairobi: complete HIV-1 RNA sequences and immunogenetic associations

scientific article

Mendel: the Swiss army knife of genetic analysis programs

scientific article

Mhc polymorphisms fail to explain the heritability of phytohaemagglutinin-induced skin swelling in a wild passerine

scientific article

Mixed effects models for quantitative trait loci mapping with inbred strains

scientific article published on 14 September 2008

Modeling maternal-offspring gene-gene interactions: the extended-MFG test

scientific article

Models for estimating bayes factors with applications to phylogeny and tests of monophyly

scientific article

Multilevel analysis of neuropathogenesis of neurocognitive impairment in HIV.

scientific article published on 4 December 2015

NFE2L2, PPARGC1α, and pesticides and Parkinson's disease risk and progression

scientific article published on 06 April 2018

Next Generation Statistical Genetics: Modeling, Penalization, and Optimization in High-Dimensional Data

scientific article

OPENMENDEL: a cooperative programming project for statistical genetics

scientific article published on 26 March 2019

Oh brother, where art thou? A Bayes factor test for recombination with uncertain heritage.

scientific article published in October 2002

Ordered multinomial regression for genetic association analysis of ordinal phenotypes at Biobank scale

scientific article published on 26 December 2019

Organophosphate Pesticide Exposures, Nitric Oxide Synthase Gene Variants, and Gene-Pesticide Interactions in a Case-Control Study of Parkinson's Disease, California (USA).

scientific article published on 18 September 2015

Organophosphate pesticides and PON1 L55M in Parkinson's disease progression

scientific article

Pesticides that inhibit the ubiquitin-proteasome system: effect measure modification by genetic variation in SKP1 in Parkinson׳s disease

scientific article published on 27 August 2013

Pooled analysis of iron-related genes in Parkinson's disease: association with transferrin

scientific article published on 08 October 2013

Presence of a primary hip osteoarthritis susceptibility locus on chromosome 6: comment on the article by Meenagh et al

scientific article published on 01 March 2006

Prioritizing GWAS results: A review of statistical methods and recommendations for their application

scientific article

Quantitative trait Loci association mapping by imputation of strain origins in multifounder crosses

scientific article published on 5 December 2011

RHD maternal-fetal genotype incompatibility and schizophrenia: extending the MFG test to include multiple siblings and birth order

scientific article published in March 2004

RHD maternal-fetal genotype incompatibility increases schizophrenia susceptibility

scientific article

Regulation of sex determination in mice by a non-coding genomic region

scientific article

Replication of GWAS Associations for GAK and MAPT in Parkinson's Disease ⬇️

scientific article published on November 8, 2010

Reuse, Recycle, Reweigh: Combating Influenza through Efficient Sequential Bayesian Computation for Massive Data

scientific article published in January 2010

Reverse gene-environment interaction approach to identify variants influencing body-mass index in humans

scientific article published on 14 June 2019

Rings Reconcile Genotypic and Phenotypic Evolution within the Proteobacteria

scientific article

Rings Reconcile Genotypic and Phenotypic Evolution within the Proteobacteria.

scientific article

Rooting Gene Trees without Outgroups: EP Rooting ⬇️

scientific article published on May 16, 2012

Sequence variant in the laminin gamma1 (LAMC1) gene associated with familial pelvic organ prolapse

scientific article published on 05 October 2006

Sex steroid metabolism polymorphisms and mammographic density in pre- and early perimenopausal women

scientific article published on 27 July 2009

Site and Gender Specificity of Inheritance of Bone Mineral Density

article

Statistical genetic approaches for mapping ophthalmic trait and disease genes

scientific article published on August 2009

Structural variants in genes associated with human Williams-Beuren syndrome underlie stereotypical hypersociability in domestic dogs

scientific article published on 19 July 2017

Subtypes of Native American ancestry and leading causes of death: Mapuche ancestry-specific associations with gallbladder cancer risk in Chile

scientific article

Suggestive Linkage of the Parathyroid Receptor Type 1 to Osteoporosis

article

Systems Genetics Approach to Biomarker Discovery: GPNMB and Heart Failure in Mice and Humans

article

Testing a molecular clock without an outgroup: derivations of induced priors on branch-length restrictions in a Bayesian framework

scientific article published in February 2003

The ATF6-Met[67]Val substitution is associated with increased plasma cholesterol levels

scientific article published on 10 August 2009

The N342S MYLIP polymorphism is associated with high total cholesterol and increased LDL receptor degradation in humans

scientific article

The Quantitative-MFG Test: A Linear Mixed Effect Model to Detect Maternal-Offspring Gene Interactions

scientific article

The Roles of Physical Activity and Inflammation in Mortality, Cognition, and Depressive Symptoms Among Older Mexican Americans

scientific article published on 01 November 2019

The chromosome 11 region from strain 129 provides protection from sex reversal in XYPOS mice

scientific article published on 5 May 2008

The concerted impact of domestication and transposon insertions on methylation patterns between dogs and grey wolves

scientific article published on 18 January 2016

The deep roots of the rings of life

scientific article published on January 2013

The longitudinal and interactive effects of HIV status, stimulant use, and host genotype upon neurocognitive functioning

scientific article

The pedigree trimming problem

scientific article published in January 2004

The v-MFG test: investigating maternal, offspring and maternal-fetal genetic incompatibility effects on disease and viability

scientific article

USF1 contributes to high serum lipid levels in Dutch FCHL families and U.S. whites with coronary artery disease

scientific article published on 02 August 2007

Uncovering the Genomic Origins of Life

scientific article published on 01 July 2018

Understanding Adult Participant and Parent Empowerment Prior to Evaluation in the Undiagnosed Diseases Network

scientific article

Understanding the Heterogeneity of Obesity and the Relationship to the Brain-Gut Axis

scientific article published on 30 November 2020

Using a social marketing framework to evaluate recruitment of a prospective study of genetic counseling and testing for the deaf community

scientific article

Using the maternal-fetal genotype incompatibility test to assess non-inherited maternal HLA-DRB1 antigen coding alleles as rheumatoid arthritis risk factors

scientific article

Vitamin D receptor gene polymorphisms and Parkinson's disease in a population with high ultraviolet radiation exposure

scientific article published on 7 April 2015

Vitamin D receptor gene polymorphisms and cognitive decline in Parkinson's disease

scientific article published on 11 September 2016

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