List of works by Crystal M. Hepp

A Bacillus anthracis Genome Sequence from the Sverdlovsk 1979 Autopsy Specimens

scientific article

An Early Pandemic Analysis of SARS-CoV-2 Population Structure and Dynamics in Arizona

scientific article published on 04 September 2020

Automated characterization of potentially active retroid agents in the human genome

scientific article published on April 2005

Burkholderia pseudomallei distribution in Australasia is linked to paleogeographic and anthropogenic history

scientific article published in PLoS ONE

Characterization of Neonatal Abstinence Syndrome in Arizona from 2010-2017

scientific article

Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity.

scientific article published on 23 July 2018

Complete mitochondrial genome of (Nematoda, Onchocercidae)

scientific article

Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction.

scientific article published on 28 March 2018

Corrigendum: Comparative pan-genomic analyses of Orientia tsutsugamushi reveal an exceptional model of bacterial evolution driving genomic diversity

scientific article published on 01 October 2018

Dating the Cryptococcus gattii Dispersal to the North American Pacific Northwest.

scientific article

Defining the Pandemic at the State Level: Sequence-Based Epidemiology of the SARS-CoV-2 virus by the Arizona COVID-19 Genomics Union (ACGU)

scientific article published on 13 May 2020

Genotyping of Burkholderia mallei from an outbreak of glanders in Bahrain suggests multiple introduction events ⬇️

scientific article

Guano exposed: Impact of aerobic conditions on bat fecal microbiota.

scientific article published on 27 April 2018

Health Disparities and Converging Epidemics in Jail Populations: Protocol for a Mixed-Methods Study

article

Health Disparities and Converging Epidemics in Jail Populations: Protocol for a Mixed-Methods Study (Preprint)

scientific article

Health Disparities in Staphylococcus aureus Transmission and Carriage in a Border Region of the United States Based on Cultural Differences in Social Relationships: Protocol for a Survey Study

scientific article published on 27 September 2019

Health disparities in jail populations: Mixed methods and multi-disciplinary community engagement for justice and health impacts

scientific article published on 01 January 2019

High Leptospira Diversity in Animals and Humans Complicates the Search for Common Reservoirs of Human Disease in Rural Ecuador

scientific article

Identifying genetic relationships among tarsier populations in the islands of Bunaken National Park and mainland Sulawesi

scientific article published on 26 March 2020

Local Population Structure and Patterns of Western Hemisphere Dispersal for Coccidioides spp., the Fungal Cause of Valley Fever

scientific article

Massive dispersal of Coxiella burnetii among cattle across the United States

scientific article published on 25 August 2016

Megafauna decline have reduced pathogen dispersal which may have increased emergent infectious diseases

scientific article

NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats.

scientific article published on 25 August 2016

Pathogen to commensal? Longitudinal within-host population dynamics, evolution, and adaptation during a chronic >16-year Burkholderia pseudomallei infection

scientific article published on 05 March 2020

Phylogenetic analysis of West Nile Virus in Maricopa County, Arizona: Evidence for dynamic behavior of strains in two major lineages in the American Southwest

scientific article published in PLoS ONE

Phylogeny of the jacchus group of Callithrix marmosets based on complete mitochondrial genomes

scientific article

Range-wide genetic analysis of Dermacentor variabilis and its Francisella-like endosymbionts demonstrates phylogeographic concordance between both taxa.

scientific article

Revisiting the evolution of mouse LINE-1 in the genomic era.

scientific article published on 3 January 2013

Sample pooling methods for efficient pathogen screening: Practical implications

scientific article published on 11 November 2020

Sample pooling methods for efficient pathogen screening: Practical implications

Selective whole genome amplification and sequencing of Coxiella burnetii directly from environmental samples

scientific article published on 31 October 2019

St. Louis Encephalitis Virus in the Southwestern United States: A Phylogeographic Case for a Multi-Variant Introduction Event ⬇️

scientific article

Systematic review: the impact of socioeconomic factors on Aedes aegypti mosquito distribution in the mainland United States

scientific article published on 24 August 2020

Temporal phylogeography of Yersinia pestis in Madagascar: Insights into the long-term maintenance of plague.

scientific article published on 5 September 2017

Towards Translational Epidemiology: Next-Generation Sequencing and Phylogeography as Epidemiological Mainstays

scientific article published on 11 June 2019

Using Whole Genome Analysis to Examine Recombination across Diverse Sequence Types of Staphylococcus aureus

scientific article published on 10 July 2015

Whole Genome Analysis of Injectional Anthrax Identifies Two Disease Clusters Spanning More Than 13 Years

scientific article published on 6 October 2015

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