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List of works by Tijana Milenković

Aligning dynamic networks with DynaWAVE

scientific article published on 01 June 2018

An integrative approach to modeling biological networks

scientific article published on 25 March 2010

Analysis of computational codon usage models and their association with translationally slow codons

scientific article published on 30 April 2020

Author Correction: GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison

scientific article published on 10 August 2020

Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy

scientific article

Characterization of the proteasome interaction network using a QTAX-based tag-team strategy and protein interaction network analysis

scholarly article

ClueNet: Clustering a temporal network based on topological similarity rather than denseness.

scientific article

Complementarity of network and sequence information in homologous proteins

scientific article published on 25 March 2010

Data-driven network alignment

scientific article published on 02 July 2020

Dominating biological networks

scientific article

Dynamic networks reveal key players in aging

scientific article published on 18 February 2014

Fair evaluation of global network aligners

scientific article published on 9 June 2015

From homogeneous to heterogeneous network alignment via colored graphlets

scientific article published in Scientific Reports

GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison.

scientific article published on 2 November 2017

Genome-wide profiling of 24 hr diel rhythmicity in the water flea, Daphnia pulex: network analysis reveals rhythmic gene expression and enhances functional gene annotation

scientific article published on 18 August 2016

Global Network Alignment in the Context of Aging

scientific article published in January 2015

GraphCrunch: a tool for large network analyses

scientific article

Improving identification of key players in aging via network de-noising and core inference

scientific article published on 26 October 2015

Inference of a Dynamic Aging-related Biological Subnetwork via Network Propagation

scientific article published on 08 September 2020

L-HetNetAligner: A novel algorithm for Local Alignment of Heterogeneous Biological Networks

scientific article published on 03 March 2020

Local versus global biological network alignment

scientific article published on 29 June 2016

MAGNA: Maximizing Accuracy in Global Network Alignment

scientific article published on 10 July 2014

Multiple network alignment via multiMAGNA+.

scientific article

Network analysis of synonymous codon usage

scientific article published on 01 July 2020

Network analysis of the NetHealth data: exploring co-evolution of individuals’ social network positions and physical activities

article

Network-based protein structural classification

scientific article published on 03 June 2020

Networks' Characteristics Matter for Systems Biology

scientific article

Optimal network alignment with graphlet degree vectors

scientific article published on 30 June 2010

Optimized null model for protein structure networks.

scientific article

Proper evaluation of alignment-free network comparison methods

scientific article published on 24 March 2015

Protein interaction network topology uncovers melanogenesis regulatory network components within functional genomics datasets

scientific article

Rebuttal to the Letter to the Editor in response to the paper: proper evaluation of alignment-free network comparison methods.

scientific article published on 10 January 2017

Revealing missing parts of the interactome via link prediction

scientific article

SCOUT: simultaneous time segmentation and community detection in dynamic networks

scientific article

Survey of local and global biological network alignment: the need to reconcile the two sides of the same coin

scientific article

Systems-level cancer gene identification from protein interaction network topology applied to melanogenesis-related functional genomics data

scientific article (publication date: 6 March 2010)

Temporal network alignment via GoT-WAVE

scientific article published on 01 September 2019

The post-genomic era of biological network alignment

scientific article

The power of dynamic social networks to predict individuals' mental health

scientific article published on 01 January 2020

Topological Characteristics of Molecular Networks

Topological network alignment uncovers biological function and phylogeny

scientific article published on 17 March 2010

Uncovering biological network function via graphlet degree signatures.

scientific article published on 14 April 2008

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