List of works - Rachel Rupp

A Point Mutation in Suppressor of Cytokine Signalling 2 (Socs2) Increases the Susceptibility to Inflammation of the Mammary Gland while Associated with Higher Body Weight and Size and Higher Milk Production in a Sheep Model.

scientific article published on 11 December 2015

A genome scan for milk production traits in dairy goats reveals two new mutations in Dgat1 reducing milk fat content

scientific article

A validation study of loci associated with mastitis resistance in two French dairy sheep breeds

article

Alternative methods improve the accuracy of genomic prediction using information from a causal point mutation in a dairy sheep model

scientific article published on 18 September 2019

Analysis of Polycerate Mutants Reveals the Evolutionary Co-option of HOXD1 for Horn Patterning in Bovidae

scientific article published on 01 May 2021

Author Correction: A genome scan for milk production traits in dairy goats reveals two new mutations in Dgat1 reducing milk fat content.

scientific article published in March 2018

Correction: Design and Characterization of a 52K SNP Chip for Goats

scientific article published on 24 March 2016

Correction: Genome Wide Association Study Identifies New Loci Associated with Undesired Coat Color Phenotypes in Saanen Goats

scientific article published on 5 October 2017

Corrigendum to "Heritability and genome-wide association mapping for supernumerary teats in French Alpine and Saanen dairy goats" (J. Dairy Sci. 99:8891-8900)

scientific article published on 01 September 2017

Design and characterization of a 52K SNP chip for goats

scientific article published on 22 January 2014

Differential response of bovine mammary epithelial cells to Staphylococcus aureus or Escherichia coli agonists of the innate immune system.

scientific article published on 11 June 2013

Diversity of copy number variation in the worldwide goat population

scientific article published on 06 November 2018

Gene Expression Profiling of Dendritic Cells Reveals Important Mechanisms Associated with Predisposition to Staphylococcus Infections ⬇️

scientific article published on August 12, 2011

Genetic susceptibility to S. aureus mastitis in sheep: differential expression of mammary epithelial cells in response to live bacteria or supernatant.

scientific article published on 14 February 2012

Genetics of resistance to mastitis in dairy cattle.

scientific article published on September 2003

Genome Wide Association Study Identifies New Loci Associated with Undesired Coat Color Phenotypes in Saanen Goats

scientific article

Genome wide association analysis on semen volume and milk yield using different strategies of imputation to whole genome sequence in French dairy goats

scientific article published on 21 February 2020

Genome-wide association mapping for type and mammary health traits in French dairy goats identifies a pleiotropic region on chromosome 19 in the Saanen breed

scientific article published on 21 March 2018

Genomic predictions based on haplotypes fitted as pseudo-SNP for milk production and udder type traits and SCS in French dairy goats

scientific article published on 08 October 2020

Heritability and genome-wide association mapping for supernumerary teats in French Alpine and Saanen dairy goats

scientific article published on 17 August 2016

Host factors determine the evolution of infection with Staphylococcus aureus to gangrenous mastitis in goats.

scientific article published on 25 July 2018

In silico identification of variations in microRNAs with a potential impact on dairy traits using whole ruminant genome SNP datasets

scientific article published on 01 October 2021

Response of the goat mammary gland to infection with Staphylococcus aureus revealed by gene expression profiling in milk somatic and white blood cells

scientific article

Selection signatures in worldwide sheep populations

scientific article

Strengthening insights into host responses to mastitis infection in ruminants by combining heterogeneous microarray data sources.

scientific article

Transcriptomic analysis of milk somatic cells in mastitis resistant and susceptible sheep upon challenge with Staphylococcus epidermidis and Staphylococcus aureus ⬇️

scientific article published on April 28, 2011

Using sequence variants of a QTL region improves the accuracy of genomic evaluation in French Saanen goats

scientific article published on 29 October 2020

VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity

publication published on 08 November 2021

Whole blood transcriptome analysis reveals potential competition in metabolic pathways between negative energy balance and response to inflammatory challenge.

scientific article published on 24 May 2017

List of works by Rachel Rupp

A Point Mutation in Suppressor of Cytokine Signalling 2 (Socs2) Increases the Susceptibility to Inflammation of the Mammary Gland while Associated with Higher Body Weight and Size and Higher Milk Production in a Sheep Model.

A genome scan for milk production traits in dairy goats reveals two new mutations in Dgat1 reducing milk fat content

A validation study of loci associated with mastitis resistance in two French dairy sheep breeds

Alternative methods improve the accuracy of genomic prediction using information from a causal point mutation in a dairy sheep model

Analysis of Polycerate Mutants Reveals the Evolutionary Co-option of HOXD1 for Horn Patterning in Bovidae

Author Correction: A genome scan for milk production traits in dairy goats reveals two new mutations in Dgat1 reducing milk fat content.

Correction: Design and Characterization of a 52K SNP Chip for Goats

Correction: Genome Wide Association Study Identifies New Loci Associated with Undesired Coat Color Phenotypes in Saanen Goats

Corrigendum to "Heritability and genome-wide association mapping for supernumerary teats in French Alpine and Saanen dairy goats" (J. Dairy Sci. 99:8891-8900)

Design and characterization of a 52K SNP chip for goats

Differential response of bovine mammary epithelial cells to Staphylococcus aureus or Escherichia coli agonists of the innate immune system.

Diversity of copy number variation in the worldwide goat population

Gene Expression Profiling of Dendritic Cells Reveals Important Mechanisms Associated with Predisposition to Staphylococcus Infections ⬇️

Genetic susceptibility to S. aureus mastitis in sheep: differential expression of mammary epithelial cells in response to live bacteria or supernatant.

Genetics of resistance to mastitis in dairy cattle.

Genome Wide Association Study Identifies New Loci Associated with Undesired Coat Color Phenotypes in Saanen Goats

Genome wide association analysis on semen volume and milk yield using different strategies of imputation to whole genome sequence in French dairy goats

Genome-wide association mapping for type and mammary health traits in French dairy goats identifies a pleiotropic region on chromosome 19 in the Saanen breed

Genomic predictions based on haplotypes fitted as pseudo-SNP for milk production and udder type traits and SCS in French dairy goats

Heritability and genome-wide association mapping for supernumerary teats in French Alpine and Saanen dairy goats

Host factors determine the evolution of infection with Staphylococcus aureus to gangrenous mastitis in goats.

In silico identification of variations in microRNAs with a potential impact on dairy traits using whole ruminant genome SNP datasets

Response of the goat mammary gland to infection with Staphylococcus aureus revealed by gene expression profiling in milk somatic and white blood cells

Selection signatures in worldwide sheep populations

Strengthening insights into host responses to mastitis infection in ruminants by combining heterogeneous microarray data sources.

Transcriptomic analysis of milk somatic cells in mastitis resistant and susceptible sheep upon challenge with Staphylococcus epidermidis and Staphylococcus aureus ⬇️

Using sequence variants of a QTL region improves the accuracy of genomic evaluation in French Saanen goats

VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity

Whole blood transcriptome analysis reveals potential competition in metabolic pathways between negative energy balance and response to inflammatory challenge.