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List of works by Jairam R Lingappa

1224Defining herpes simplex virus type 2 sequence heterogeneity using next generation sequencing.

scientific article

A cross-sectional analysis of Trichomonas vaginalis infection among heterosexual HIV-1 serodiscordant African couples

scientific article published on 4 April 2017

A eukaryotic cytosolic chaperonin is associated with a high molecular weight intermediate in the assembly of hepatitis B virus capsid, a multimeric particle

scientific article

A multistep, ATP-dependent pathway for assembly of human immunodeficiency virus capsids in a cell-free system

scientific article

A pharmacokinetic and pharmacogenetic evaluation of contraceptive implants and antiretroviral therapy among women in Kenya and Uganda

scientific article published on 01 November 2019

Acyclovir Prophylaxis Reduces the Incidence of Herpes Zoster Among HIV-Infected Individuals: Results of a Randomized Clinical Trial

scientific article

Acyclovir and transmission of HIV-1 from persons infected with HIV-1 and HSV-2.

scientific article

Adverse events in humans associated with accidental exposure to the livestock brucellosis vaccine RB51.

scientific article

An Empiric Risk Scoring Tool for Identifying High-Risk Heterosexual HIV-1–Serodiscordant Couples for Targeted HIV-1 Prevention ⬇️

scientific article published on March 1, 2013

An excess of rare genetic variation in ABCE1 among Yorubans and African-American individuals with HIV-1.

scientific article

Antiretroviral Pre-Exposure Prophylaxis Does Not Enhance Immune Responses to HIV in Exposed but Uninfected Persons

scientific article published on 17 December 2014

Antiretroviral Prophylaxis for HIV Prevention in Heterosexual Men and Women ⬇️

scientific article published on July 11, 2012

Association of recent HIV infection and in-utero HIV-1 transmission

scientific article published on July 2011

Bacterial vaginosis and risk of HIV infection in the context of CD101 gene variation

scientific article published on 18 September 2020

Bacterial vaginosis associated with increased risk of female-to-male HIV-1 transmission: a prospective cohort analysis among African couples ⬇️

scientific article

Brief Report: Hormonal Contraception Is Not Associated With Reduced ART Effectiveness Among Women Initiating ART: Evidence From Longitudinal Data

scientific article

Characteristics of HIV-1 discordant couples enrolled in a trial of HSV-2 suppression to reduce HIV-1 transmission: the partners study

scientific article

Characteristics of HIV-1 serodiscordant couples enrolled in a clinical trial of antiretroviral pre-exposure prophylaxis for HIV-1 prevention

scientific article (publication date: 2011)

Chronic Meningitis Investigated via Metagenomic Next-Generation Sequencing.

scientific article

Clinical and therapeutic issues for herpes simplex virus-2 and HIV co-infection

scientific article published on January 2007

Comparisons of Human Immunodeficiency Virus Type 1 Envelope Variants in Blood and Genital Fluids near the Time of Male-to-Female Transmission

scientific article published on 14 June 2019

Concordance of self-reported hormonal contraceptive use and presence of exogenous hormones in serum among African women

scientific article published on 2 February 2018

Correction for Lund et al., HIV-1-Neutralizing IgA Detected in Genital Secretions of Highly HIV-1-Exposed Seronegative Women on Oral Preexposure Prophylaxis

scientific article published on 18 January 2017

Correction: Genomewide Association Study for Determinants of HIV-1 Acquisition and Viral Set Point in HIV-1 Serodiscordant Couples with Quantified Virus Exposure.

scientific article published on 17 January 2012

Correction: Whole genome sequencing of extreme phenotypes identifies variants in CD101 and UBE2V1 associated with increased risk of sexually acquired HIV-1

article

Correlation between pill counts and biologic effects in an HIV-1 prevention clinical trial: implications for measuring adherence

scientific article published on February 2013

Daily acyclovir for HIV-1 disease progression in people dually infected with HIV-1 and herpes simplex virus type 2: a randomised placebo-controlled trial

scientific article

Daily acyclovir to decrease herpes simplex virus type 2 (HSV-2) transmission from HSV-2/HIV-1 coinfected persons: a randomized controlled trial

scientific article published on 30 July 2013

Determinants of per-coital-act HIV-1 infectivity among African HIV-1-serodiscordant couples

scientific article

Development of methods for cross-sectional HIV incidence estimation in a large, community randomized trial

scientific article

Diagnosis of community-acquired pertussis infection: comparison of both culture and fluorescent-antibody assays with PCR detection using electrophoresis or dot blot hybridization

scientific article

Differential regulatory T cell activity in HIV type 1-exposed seronegative individuals

scientific article published on 30 July 2013

Direct sequencing of SARS-coronavirus S and N genes from clinical specimens shows limited variation

scientific article published on 17 August 2004

Dual-strain genital herpes simplex virus type 2 (HSV-2) infection in the US, Peru, and 8 countries in sub-Saharan Africa: A nested cross-sectional viral genotyping study.

scientific article published on 27 December 2017

Effect of Condom Use on Per-act HSV-2 Transmission Risk in HIV-1, HSV-2-discordant Couples

scientific article

Effect of Pregnancy on Response to Antiretroviral Therapy in HIV-Infected African Women

scientific article published on 13 October 2016

Efficacy of oral pre-exposure prophylaxis (PrEP) for HIV among women with abnormal vaginal microbiota: a post-hoc analysis of the randomised, placebo-controlled Partners PrEP Study

scientific article

Epidemiology of invasive Haemophilus influenzae type A disease among Navajo and White Mountain Apache children, 1988-2003.

scientific article

Erratum to: Precision of the Kalon Herpes Simplex Virus Type 2 IgG ELISA: an international inter-laboratory assessment

scientific article published on 19 May 2017

Estimating the impact of plasma HIV-1 RNA reductions on heterosexual HIV-1 transmission risk

scientific article

Evaluation of the association between the concentrations of key vaginal bacteria and the increased risk of HIV acquisition in African women from five cohorts: a nested case-control study.

scientific article published on 25 January 2018

Functional and Structural Insights into a Vif/PPP2R5 Complex Elucidated using Patient HIV-1 Isolates and Computational Modeling

scientific article published on 26 August 2020

Genetic and mechanistic basis for APOBEC3H alternative splicing, retrovirus restriction, and counteraction by HIV-1 protease

scientific article published in Nature Communications

Genital HIV-1 RNA predicts risk of heterosexual HIV-1 transmission

scientific article

Genomewide association study for determinants of HIV-1 acquisition and viral set point in HIV-1 serodiscordant couples with quantified virus exposure

scientific article

HIV risk associated with serum medroxyprogesterone acetate levels among women in East and southern Africa

article

HIV-1 subtype C is not associated with higher risk of heterosexual HIV-1 transmission: a multinational study among HIV-1 serodiscordant couples

scientific article

HIV-1-Neutralizing IgA Detected in Genital Secretions of Highly HIV-1-Exposed Seronegative Women on Oral Preexposure Prophylaxis

scientific article published on 24 August 2016

Herpes simplex virus type 2 suppressive therapy with acyclovir or valacyclovir does not select for specific HIV-1 resistance in HIV-1/HSV-2 dually infected persons

scientific article

Heterosexual HIV-1 transmission after initiation of antiretroviral therapy: a prospective cohort analysis

scientific article

Highly conserved intragenic HSV-2 sequences: Results from next-generation sequencing of HSV-2 UL and US regions from genital swabs collected from 3 continents

scientific article

Host genetic and viral determinants of HIV-1 RNA set point among HIV-1 seroconverters from sub-saharan Africa

scientific article

Host genetic polymorphisms associated with innate immune factors and HIV-1 ⬇️

scientific article published on September 1, 2011

Identifying host genetic risk factors in the context of public health surveillance for invasive pneumococcal disease

scientific article

Integrating host genomics with surveillance for invasive bacterial diseases

scientific article published on July 2008

Lack of SARS transmission and U.S. SARS case-patient

scientific article published in February 2004

Lower respiratory tract infections among american Indian and Alaska Native children and the general population of U.S. Children

scientific article published in April 2005

Microbiome Composition and Function Drives Wound-Healing Impairment in the Female Genital Tract

scientific article

Mortality in members of HIV-1 serodiscordant couples in Africa and implications for antiretroviral therapy initiation: results of analyses from a multicenter randomized trial

scientific article

Neutralizing Activity of Broadly Neutralizing anti-HIV-1 Antibodies against Primary African Isolates

scientific article published on 09 December 2020

New insights on interactions between HIV-1 and HSV-2.

scientific article published in March 2009

OA01-06 LB. HIV-1 plasma RNA and risk of HIV-1 transmission

scientific article

Outbreak of Leptospirosis among Triathlon Participants and Community Residents in Springfield, Illinois, 1998

article by Juliette Morgan et al published 15 June 2002 in Clinical Infectious Diseases

Outbreak of W135 meningococcal disease in 2000: not emergence of a new W135 strain but clonal expansion within the electophoretic type-37 complex

scientific article published on 17 May 2002

Partner characteristics predicting HIV-1 set point in sexually acquired HIV-1 among African seroconverters

scientific article published on January 2013

Performance of the Focus HerpeSelect-2 enzyme immunoassay for the detection of herpes simplex virus type 2 antibodies in seven African countries

scientific article

Plasma cytokine levels and risk of HIV type 1 (HIV-1) transmission and acquisition: a nested case-control study among HIV-1-serodiscordant couples

scientific article published on 10 November 2014

Plasma viral loads during early HIV-1 infection are similar in subtype C- and non-subtype C-infected African seroconverters

scientific article published on 11 January 2013

Pre-exposure prophylaxis differentially alters circulating and mucosal immune cell activation in herpes simplex virus type 2 seropositive women

scientific article published on 01 November 2019

Precision of the Kalon Herpes Simplex Virus Type 2 IgG ELISA: an international inter-laboratory assessment

scientific article published on 30 September 2015

Prevalence, Magnitude, and Correlates of HIV-1 Genital Shedding in Women on Antiretroviral Therapy

article

Quantifying ongoing HIV-1 exposure in HIV-1-serodiscordant couples to identify individuals with potential host resistance to HIV-1

scientific article

Regional differences in prevalence of HIV-1 discordance in Africa and enrollment of HIV-1 discordant couples into an HIV-1 prevention trial

scientific article

Regulatory T-Cell Activity But Not Conventional HIV-Specific T-Cell Responses Are Associated With Protection From HIV-1 Infection

scientific article published on 9 December 2015

Relationship between the Oral and Vaginal Microbiota of South African Adolescents with High Prevalence of Bacterial Vaginosis

scientific article published on 04 July 2020

Risk Factors for HSV-2 Infection among Sexual Partners of HSV-2/HIV-1 Co-Infected Persons

scientific article

Risk factors for bronchiolitis-associated deaths among infants in the United States

scientific article published in June 2003

SARS and pregnancy: a case report

scientific article published in February 2004

SARS clinical features, United States, 2003.

scientific article published on January 2005

SARS-associated coronavirus transmission, United States

scientific article published in February 2004

Serogroup W-135 meningococcal disease during the Hajj, 2000

scientific article

Severe acute respiratory syndrome: public health response and clinical practice update for an emerging disease

scientific article published on February 2004

Simultaneous quantitation of multiple contraceptive hormones in human serum by LC-MS/MS.

scientific article published on 30 January 2018

Specific, sensitive, and quantitative enzyme-linked immunosorbent assay for human immunoglobulin G antibodies to anthrax toxin protective antigen

scientific article

Specificity of four laboratory approaches for cross-sectional HIV incidence determination: analysis of samples from adults with known nonrecent HIV infection from five African countries

scientific article

Surveillance for meningococcal disease and strategies for use of conjugate meningococcal vaccines in the United States

scientific article published in 2001

The effect of oral preexposure prophylaxis on the progression of HIV-1 seroconversion

scientific article published on 7 July 2017

Toll-Like Receptor (TLR) 9 polymorphism is associated with increased Epstein-Barr virus and Cytomegalovirus acquisition in HIV-exposed infants

scientific article published on 2 November 2017

Toll-like receptor gene variants and bacterial vaginosis among HIV-1 infected and uninfected African women

scientific article published on 30 April 2015

Toll-like receptor polymorphism associations with HIV-1 outcomes among sub-Saharan Africans

scientific article published on 10 December 2013

Toll-like receptor variants are associated with infant HIV-1 acquisition and peak plasma HIV-1 RNA level

scientific article

Transient Increase in Herpes Simplex Virus Type 2 (HSV-2)-Associated Genital Ulcers Following Initiation of Antiretroviral Therapy in HIV/HSV-2-Coinfected Individuals.

scientific article published on 23 December 2015

Treatment with Commonly Used Antiretroviral Drugs Induces a Type I/III Interferon Signature in the Gut in the Absence of HIV Infection

scientific article published on 22 September 2020

Unreported antiretroviral use by HIV-1-infected participants enrolling in a prospective research study

scientific article published on February 2014

Use of acyclovir for suppression of human immunodeficiency virus infection is not associated with genotypic evidence of herpes simplex virus type 2 resistance to acyclovir: analysis of specimens from three phase III trials

scientific article

Using Plasma Viral Load to Guide Antiretroviral Therapy Initiation to Prevent HIV-1 Transmission ⬇️

scientific article published on November 30, 2012

Variants in host viral replication cycle genes are associated with heterosexual HIV-1 acquisition in Africans

scientific article

Viral linkage in HIV-1 seroconverters and their partners in an HIV-1 prevention clinical trial

scientific article

Whole genome sequencing of extreme phenotypes identifies variants in CD101 and UBE2V1 associated with increased risk of sexually acquired HIV-1.

scientific article published on 6 November 2017

Worldwide circulation of HSV-2 × HSV-1 recombinant strains

scientific article published on 13 March 2017

Wrestling SARS from uncertainty

scientific article

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