Search filters

List of works by Timothy M Walker

A novel multi SNP based method for the identification of subspecies and associated lineages and sub-lineages of the Mycobacterium tuberculosis complex by whole genome sequencing

scholarly article published 5 November 2017

Antibiotic resistance prediction for Mycobacterium tuberculosis from genome sequence data with Mykrobe

scientific article published on 02 December 2019

Antibody Status and Incidence of SARS-CoV-2 Infection in Health Care Workers

scientific article published on 23 December 2020

Assessment of Mycobacterium tuberculosis transmission in Oxfordshire, UK, 2007-12, with whole pathogen genome sequences: an observational study

scientific article

Automated detection of bacterial growth on 96-well plates for high-throughput drug susceptibility testing of Mycobacterium tuberculosis

scientific article published on 23 October 2018

Contact investigations for outbreaks of Mycobacterium tuberculosis: advances through whole genome sequencing ⬇️

scientific article published on February 21, 2013

Corrigendum: Automated detection of bacterial growth on 96-well plates for high-throughput drug susceptibility testing of Mycobacterium tuberculosis

scientific article published on 01 May 2019

Corrigendum: Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis.

scientific article published on 20 April 2016

DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis

scholarly article by Yang Yang et al published 28 January 2019 in Computer applications in the biosciences : CABIOS

DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis

scholarly article by Timothy M Walker et al published 28 January 2019 in Bioinformatics

Differential occupational risks to healthcare workers from SARS-CoV-2 observed during a prospective observational study

scientific article published on 21 August 2020

Identifying lineage effects when controlling for population structure improves power in bacterial association studies

scientific article published on 04 April 2016

Improved Performance Predicting Clarithromycin Resistance in Mycobacterium abscessus on an Independent Data Set

scientific article published on 25 July 2019

Machine Learning for Classifying Tuberculosis Drug-Resistance from DNA Sequencing Data.

scientific article published on 12 December 2017

Multi-Label Random Forest Model for Tuberculosis Drug Resistance Classification and Mutation Ranking

scientific article published on 22 April 2020

Mycobacterial DNA extraction for whole-genome sequencing from early positive liquid (MGIT) cultures

scientific article published on 28 January 2015

Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing

scientific article published on 26 September 2018

Prediction of pyrazinamide resistance in Mycobacterium tuberculosis using structure-based machine learning approaches.: Supplemental Tables

scholarly article published 11 January 2019

Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis

scientific article

Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study ⬇️

scientific article

SNP-IT Tool for Identifying Subspecies and Associated Lineages of Mycobacterium tuberculosis Complex

scholarly article by Samuel Lipworth et al published March 2019 in Emerging Infectious Diseases

Same-Day Diagnostic and Surveillance Data for Tuberculosis via Whole-Genome Sequencing of Direct Respiratory Samples

scientific article

Same-day diagnostic and surveillance data for tuberculosis via whole genome sequencing of direct respiratory samples

scholarly article published 19 December 2016

Some Synonymous and Nonsynonymous gyrA Mutations in Mycobacterium tuberculosis Lead to Systematic False-Positive Fluoroquinolone Resistance Results with the Hain GenoType MTBDRsl Assays

scientific article published on 30 January 2017

The duration, dynamics and determinants of SARS-CoV-2 antibody responses in individual healthcare workers

scientific article published on 06 January 2021

Updating the WHO target product profile for next-generation Mycobacterium tuberculosis drug susceptibility testing at peripheral centres ⬇️

scientific article published on 31 March 2023

Using hospital network-based surveillance for antimicrobial resistance as a more robust alternative to self-reporting

scientific article published on 25 July 2019

Validating a 14-Drug Microtiter Plate Containing Bedaquiline and Delamanid for Large-Scale Research Susceptibility Testing of Mycobacterium tuberculosis

scientific article published on 27 August 2018

Whole genome sequencing for predicting clarithromycin resistance in

scientific article published on 21 December 2018

Whole genome sequencing for predicting clarithromycin resistance in Mycobacterium abscessus

article

Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study

scientific article published on 23 June 2015

Whole-genome sequencing to delineate Mycobacterium tuberculosis outbreaks: a retrospective observational study

scientific article

Paulina is supported by:

About Paulina

Help