List of works - Baldo Oliva

Amyloid-β Peptide Nitrotyrosination Stabilizes Oligomers and Enhances NMDAR-Mediated Toxicity.

scientific article published in November 2016

Analysis of the robustness of network-based disease-gene prioritization methods reveals redundancy in the human interactome and functional diversity of disease-genes

scientific article

ArchDB 2014: structural classification of loops in proteins

scientific article

Arginine Citrullination at the C-Terminal Domain Controls RNA Polymerase II Transcription

scientific article published on 21 November 2018

BIPS: BIANA Interolog Prediction Server. A tool for protein–protein interaction inference ⬇️

scientific article published on June 11, 2012

Erratum: Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

scientific article published on 10 October 2016

Exploiting Protein-Protein Interaction Networks for Genome-Wide Disease-Gene Prioritization ⬇️

scientific article published on September 21, 2012

Find and cut-and-transfer (FiCAT) mammalian genome engineering

scientific article published on 03 December 2021

Frag'r'Us: knowledge-based sampling of protein backbone conformations for de novo structure-based protein design

scientific article published on 6 March 2014

GUILDify v2.0: A Tool to Identify Molecular Networks Underlying Human Diseases, Their Comorbidities and Their Druggable Targets

scientific article published on 07 March 2019

GUILDify: a web server for phenotypic characterization of genes through biological data integration and network-based prioritization algorithms

scientific article

Genetic and functional characterization of disease associations explains comorbidity

scientific article published on 24 July 2017

Human procarboxypeptidase B: three-dimensional structure and implications for thrombin-activatable fibrinolysis inhibitor (TAFI)

scientific article

In vivo tumor targeting and imaging with engineered trivalent antibody fragments containing collagen-derived sequences

scientific article

In-silico drug repurposing study predicts the combination of pirfenidone and melatonin as a promising candidate therapy to reduce SARS-CoV-2 infection progression and respiratory distress caused by cytokine storm

scientific article published on 02 October 2020

In-silico simulated prototype-patients using TPMS technology to study a potential adverse effect of sacubitril and valsartan

scientific article published on 13 February 2020

Insight into the machinery that oils chromatin dynamics

scientific article published on 28 November 2016

Intramolecular trimerization, a novel strategy for making multispecific antibodies with controlled orientation of the antigen binding domains

scientific article

Knowledge-based modeling of peptides at protein interfaces: PiPreD.

scientific article published on 23 December 2014

Multivalent antibodies: when design surpasses evolution.

scientific article published on 04 May 2010

Network, Transcriptomic and Genomic Features Differentiate Genes Relevant for Drug Response

article

Prediction of a new class of RNA recognition motif

scientific article published on 17 November 2010

Protein kinase CK2-dependent phosphorylation of the human Regulators of Calcineurin reveals a novel mechanism regulating the calcineurin–NFATc signaling pathway ⬇️

scientific article published on June 1, 2013

The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins

scientific article published on 21 March 2019

Toward PWAS: discovering pathways associated with human disorders.

scientific article published on 21 November 2011

Using collections of structural models to predict changes of binding affinity caused by mutations in protein-protein interactions

scientific article published on 14 August 2020

List of works by Baldo Oliva

Amyloid-β Peptide Nitrotyrosination Stabilizes Oligomers and Enhances NMDAR-Mediated Toxicity.

Analysis of the robustness of network-based disease-gene prioritization methods reveals redundancy in the human interactome and functional diversity of disease-genes

ArchDB 2014: structural classification of loops in proteins

Arginine Citrullination at the C-Terminal Domain Controls RNA Polymerase II Transcription

BIPS: BIANA Interolog Prediction Server. A tool for protein–protein interaction inference ⬇️

Erratum: Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis

Exploiting Protein-Protein Interaction Networks for Genome-Wide Disease-Gene Prioritization ⬇️

Find and cut-and-transfer (FiCAT) mammalian genome engineering

Frag'r'Us: knowledge-based sampling of protein backbone conformations for de novo structure-based protein design

GUILDify v2.0: A Tool to Identify Molecular Networks Underlying Human Diseases, Their Comorbidities and Their Druggable Targets

GUILDify: a web server for phenotypic characterization of genes through biological data integration and network-based prioritization algorithms

Genetic and functional characterization of disease associations explains comorbidity

Human procarboxypeptidase B: three-dimensional structure and implications for thrombin-activatable fibrinolysis inhibitor (TAFI)

In vivo tumor targeting and imaging with engineered trivalent antibody fragments containing collagen-derived sequences

In-silico drug repurposing study predicts the combination of pirfenidone and melatonin as a promising candidate therapy to reduce SARS-CoV-2 infection progression and respiratory distress caused by cytokine storm

In-silico simulated prototype-patients using TPMS technology to study a potential adverse effect of sacubitril and valsartan

Insight into the machinery that oils chromatin dynamics

Intramolecular trimerization, a novel strategy for making multispecific antibodies with controlled orientation of the antigen binding domains

Knowledge-based modeling of peptides at protein interfaces: PiPreD.

Multivalent antibodies: when design surpasses evolution.

Network, Transcriptomic and Genomic Features Differentiate Genes Relevant for Drug Response

Prediction of a new class of RNA recognition motif

Protein kinase CK2-dependent phosphorylation of the human Regulators of Calcineurin reveals a novel mechanism regulating the calcineurin–NFATc signaling pathway ⬇️

The exonuclease Xrn1 activates transcription and translation of mRNAs encoding membrane proteins

Toward PWAS: discovering pathways associated with human disorders.

Using collections of structural models to predict changes of binding affinity caused by mutations in protein-protein interactions