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List of works by Phillip I Tarr

2017 Infectious Diseases Society of America Clinical Practice Guidelines for the Diagnosis and Management of Infectious Diarrhea

scientific article published on 19 October 2017

2017 Infectious Diseases Society of America Clinical Practice Guidelines for the Diagnosis and Management of Infectious Diarrhea

scientific article published in November 2017

3343 Identification of host-microbial interaction networks that mediate intestinal epithelial barrier function in necrotizing enterocolitis

A Clinical Epidemiology and Molecular Attribution Evaluation of Adenoviruses in Paediatric Acute Gastroenteritis: A Case-Control Study

scientific article published on 28 October 2020

A method for isolating and analyzing human mRNA from newborn stool

scientific article

A novel histological index for evaluation of environmental enteric dysfunction identifies geographic-specific features of enteropathy among children with suboptimal growth

scientific article published on 13 January 2020

A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis

scholarly article

ABO and P1 blood group antigen expression and stx genotype and outcome of childhood Escherichia coli O157:H7 infections

scientific article

Acute bloody diarrhea: a medical emergency for patients of all ages.

scientific article published on 07 May 2009

Agitation down-regulates immunoglobulin binding protein EibG expression in Shiga toxin-producing Escherichia coli (STEC)

scientific article published on 6 March 2015

Alberta Provincial Pediatric EnTeric Infection TEam (APPETITE): epidemiology, emerging organisms, and economics

scientific article published on 31 July 2015

Analysis of urinary Escherichia coli isolates for ability to produce Shiga toxin

scientific article

Antibiotic perturbation of the preterm infant gut microbiome and resistome

scientific article published on 29 July 2016

Antibiotic-driven intestinal dysbiosis in pediatric short bowel syndrome is associated with persistently altered microbiome functions and gut-derived bloodstream infections

scientific article published on 01 January 2021

Association between Age, Weight, and Dose and Clinical Response to Probiotics in Children with Acute Gastroenteritis

scientific article published on 03 December 2020

Associations Between Hydration Status, Intravenous Fluid Administration, and Outcomes of Patients Infected With Shiga Toxin-Producing Escherichia coli: A Systematic Review and Meta-analysis.

scientific article

Attribution of Pediatric Acute Gastroenteritis Episodes and Emergency Department Visits to Norovirus GI and GII

scientific article published on 02 July 2020

Azithromycin decolonization of STEC--a new risk emerges.

scientific article published on 5 June 2012

Bacterial DNA content in the intestinal wall from infants with necrotizing enterocolitis ⬇️

scientific article published on June 1, 2011

Basic fibroblast growth factor and Shiga toxin-O157:H7-associated hemolytic uremic syndrome

scientific article published on 01 March 2002

Biogeography of the ecosystems of the healthy human body

scientific article

Cardiac ischemia during hemolytic uremic syndrome

scientific article

Carriage of Cronobacter sakazakii in the very preterm infant gut.

scientific article published on 31 January 2018

Case definitions of hemolytic uremic syndrome following Escherichia coli O157:H7 infection vary in validity

scientific article published on 10 October 2018

Case-Control Assessment of the Roles of Noroviruses, Human Bocaviruses 2, 3, and 4, and Novel Polyomaviruses and Astroviruses in Acute Childhood Diarrhea

scientific article

Chromosomal instability in enterohaemorrhagic Escherichia coli O157:H7: impact on adherence, tellurite resistance and colony phenotype

scientific article

Ciprofloxacin-resistant gram-negative bacilli in the fecal microflora of children

scientific article

Clinical and Laboratory Predictors of Shiga Toxin-Producing Escherichia coli Infection in Children With Bloody Diarrhea.

scientific article

Comparative Evaluation of Enteric Bacterial Culture and a Molecular Multiplex Syndromic Panel in Children with Acute Gastroenteritis

scientific article published on 24 May 2019

Confirmation of an old adage: you find what you seek

scientific article published in January 2005

Contribution and Interaction of Shiga Toxin Genes to Escherichia coli O157:H7 Virulence

scientific article published on 18 October 2019

Correction: Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis

scientific article published on 28 July 2015

Deer sausage: a newly identified vehicle of transmission of Escherichia coli O157:H7.

scientific article

Detection and characterization of the fimbrial sfp cluster in enterohemorrhagic Escherichia coli O165:H25/NM isolates from humans and cattle

scientific article published on 31 October 2008

Detection of low-concentration host mRNA transcripts in Malawian children at risk for environmental enteropathy

scientific article published on January 2013

Development of an enhanced human gastrointestinal epithelial culture system to facilitate patient-based assays.

scientific article

Development of the gut microbiota and mucosal IgA responses in twins and gnotobiotic mice

scientific article

Developmental dynamics of the preterm infant gut microbiota and antibiotic resistome

scientific article

Diagnostic Interpretation Guidance for Pediatric Enteric Pathogens: A Modified Delphi Consensus Process

scientific article published on 27 September 2018

Diagnostic Test Accuracy of Commercial Tests for Detection of Shiga Toxin-Producing Escherichia coli: A Systematic Review and Meta-Analysis

scientific article published on 01 February 2020

Diarrhea etiology in a Children's Hospital Emergency Department: a prospective cohort study.

scientific article

Diarrhea etiology in a pediatric emergency department: a case control study

scientific article published on 14 June 2012

Discordant transmission of bacteria and viruses from mothers to babies at birth

scientific article published on 10 December 2019

Droplet digital PCR quantifies host inflammatory transcripts in feces reliably and reproducibly.

scientific article published on 6 April 2016

Dysregulation of angiopoietin 1 and 2 in Escherichia coli O157:H7 infection and the hemolytic-uremic syndrome

scientific article

Early life dynamics of the human gut virome and bacterial microbiome in infants.

scientific article published on 14 September 2015

Early pregnancy vaginal microbiome trends and preterm birth

scientific article published on 23 May 2017

Early volume expansion during diarrhea and relative nephroprotection during subsequent hemolytic uremic syndrome

scientific article

Editorial Commentary: Escherichia coli O104:H4 and Hemolytic Uremic Syndrome: The Analysis Begins

scientific article published on 05 June 2012

Editorial commentary: Clostridium difficile in children: colonization and consequences

scientific article published on 26 March 2013

Enteric infections and diagnostic testing

scientific article

Enterohaemorrhagic Escherichia coli in human medicine

scientific article

Enteropathogen Detection in Children with Diarrhea and/or Vomiting: A Cohort Study Comparing Rectal Flocked Swabs and Stool Specimens.

scientific article published on 4 October 2017

Enteropathogen detection in children with diarrhoea, or vomiting, or both, comparing rectal flocked swabs with stool specimens: an outpatient cohort study.

scientific article

Environmental Enteric Dysfunction Includes a Broad Spectrum of Inflammatory Responses and Epithelial Repair Processes

scientific article

Environmental Enteric Dysfunction Is Associated With Poor Linear Growth and Can Be Identified by Host Fecal mRNAs

scientific article

Environmental Enteric Dysfunction and the Fecal Microbiota in Malawian Children.

scientific article

Environmental Enteric Dysfunction: A Case Definition for Intervention Trials

scientific article published on 25 September 2017

Environmental enteric dysfunction: pathogenesis, diagnosis, and clinical consequences

scientific article

Epithelial Indoleamine 2,3-Dioxygenase 1 Modulates Aryl Hydrocarbon Receptor and Notch Signaling to Increase Differentiation of Secretory Cells and Alter Mucus-Associated Microbiota

scientific article published on 17 July 2019

Erratum: Gut resistome development in healthy twin pairs in the first year of life

scientific article published on 23 July 2015

Escherichia coli O157: H7: Overview of Clinical and Epidemiological Issues

scientific article published on 01 July 1994

Escherichia coli O157:H7 Shiga toxin-encoding bacteriophages: integrations, excisions, truncations, and evolutionary implications

scientific article

Escherichia coli O157:H7 infections: discordance between filterable fecal shiga toxin and disease outcome

scientific article

Etiology of diarrhea in pediatric outpatient settings

scientific article published on February 2005

Explaining unexplained diarrhea and associating risks and infections

scientific article published on June 2007

Expression of putative virulence factors of Escherichia coli O157:H7 differs in bovine and human infections

scientific article

Expression of the Escherichia coli IrgA homolog adhesin is regulated by the ferric uptake regulation protein

scientific article

Factors Associated with Non-Adherence in an Emergency Department Based Multicenter Randomized Clinical Trial of a Probiotic in Children with Acute Gastroenteritis

scientific article published on 14 August 2020

Fecal carriage of methicillin-resistant Staphylococcus aureus and vancomycin-resistant Enterococcus in healthy children.

scientific article published on 25 November 2013

Fim operon variation in the emergence of Enterohemorrhagic Escherichia coli: an evolutionary and functional analysis

scientific article published on 6 June 2007

From diarrhoea to haemolytic uraemic syndrome - when to seek advice

scientific article published on 01 April 2009

Further evidence of constrained radiation in the evolution of pathogenic Escherichia coli O157:H7

scientific article published on 05 August 2010

Gastroenteritis Severity: A Prospective Cohort Comparison of Children in Emergency Department and Home Settings.

scientific article published on 4 October 2017

Gastrointestinal viruses were not found as an aetiology of culture-negative illness in NICU patients

scientific article published on 5 April 2013

Genome Sequence of Escherichia coli O157:H7 Strain 2886-75, Associated with the First Reported Case of Human Infection in the United States

scientific article published on 09 January 2014

Geogenomic Segregation and Temporal Trends of Human Pathogenic Escherichia coli O157:H7, Washington, USA, 2005-20141.

scientific article published in January 2018

Greater diversity of Shiga toxin-encoding bacteriophage insertion sites among Escherichia coli O157:H7 isolates from cattle than in those from humans

scientific article

Gut Colonization of Healthy Children and Their Mothers With Pathogenic Ciprofloxacin-Resistant Escherichia coli

scientific article published on 12 May 2015

Gut bacteria and late-onset neonatal bloodstream infections in preterm infants

scientific article published on 23 June 2016

Gut bacteria dysbiosis and necrotising enterocolitis in very low birthweight infants: a prospective case-control study

scientific article published on 8 March 2016

Gut resistome development in healthy twin pairs in the first year of life

scientific article published on 25 June 2015

Hemolytic uremic syndrome in association with typhoid fever

scientific article

Heteropathogenic virulence and phylogeny reveal phased pathogenic metamorphosis in Escherichia coli O2:H6.

scientific article published on 10 January 2014

High-frequency secondary mutations after suicide-driven allelic exchange mutagenesis in extraintestinal pathogenic Escherichia coli.

scientific article published on September 2003

Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis

scientific article published on 30 June 2015

Impact of neonatal intensive care bed configuration on rates of late-onset bacterial sepsis and methicillin-resistant Staphylococcus aureus colonization

scientific article published on 25 June 2015

Impaired Barrier Function and Autoantibody Generation in Malnutrition Enteropathy in Zambia

scientific article published on 19 July 2017

Impaired Chylomicron Assembly Modifies Hepatic Metabolism Through Bile Acid-Dependent and Transmissible Microbial Adaptations

scientific article published on 23 May 2019

Independence of gut bacterial content and neonatal necrotizing enterocolitis severity

scientific article published on 5 April 2017

Infant diet and maternal gestational weight gain predict early metabolic maturation of gut microbiomes

scientific article published on 29 October 2018

Influenza virus detection in the stool of children with acute gastroenteritis

scientific article published on 01 August 2020

Intestinal dysbiosis in preterm infants preceding necrotizing enterocolitis: a systematic review and meta-analysis.

scientific article

Intestinal infections and environmental enteropathy: Working Group report of the second World Congress of Pediatric Gastroenterology, Hepatology, and Nutrition

scientific article published on June 2004

Intestinal inflammatory biomarkers and outcome in pediatric Clostridium difficile infections

scientific article

Isolation of patients acutely infected with Escherichia coli O157:H7: low-tech, highly effective prevention of hemolytic uremic syndrome

scientific article published on 01 April 2008

Lactobacillus for Gastroenteritis in Children. Reply

scientific article published on 01 May 2019

Lactobacillus rhamnosus GG versus Placebo for Acute Gastroenteritis in Children

scientific article published on 01 November 2018

Lactotrehalose, an Analog of Trehalose, Increases Energy Metabolism Without Promoting Clostridioides difficile Infection in Mice

scientific article published on 12 December 2019

Letter: Lactobacillus rhamnosus GG offers no benefit over placebo in children with acute gastroenteritis

scientific article published on 01 September 2019

Lipopolysaccharide from enterohemorrhagic Escherichia coli binds to platelets through TLR4 and CD62 and is detected on circulating platelets in patients with hemolytic uremic syndrome

scientific article

Longitudinal gut virome analysis identifies specific viral signatures that precede necrotizing enterocolitis onset in preterm infants

scientific article published on 21 April 2022

Loop-mediated isothermal amplification assay for rapid detection of common strains of Escherichia coli

scientific article published on 11 June 2008

Markers of intestinal inflammation, not bacterial burden, correlate with clinical outcomes in Clostridium difficile infection

scientific article published on 13 March 2013

Maternal activation of the EGFR prevents translocation of gut-residing pathogenic Escherichia coli in a model of late-onset neonatal sepsis

scientific article published on 16 March 2020

Measurement of gut permeability using fluorescent tracer agent technology

scientific article

Metagenomic analysis of human diarrhea: viral detection and discovery

scientific article published on 29 February 2008

Microbial antigen encounter during a preweaning interval is critical for tolerance to gut bacteria.

scientific article published in December 2017

Molecular characterization of a serotype O121:H19 clone, a distinct Shiga toxin-producing clone of pathogenic Escherichia coli

scientific article

Molecular profiling and phenotype analysis of Escherichia coli O26:H11 and O26:NM: secular and geographic consistency of enterohemorrhagic and enteropathogenic isolates

scientific article

Multiplex Nucleic Acid Amplification Testing to Diagnose Gut Infections: Challenges, Opportunities, and Result Interpretation

scientific article published on 29 September 2018

Necrotizing enterocolitis and preterm infant gut bacteria

scientific article published on 22 June 2016

Necrotizing enterocolitis and the microbiome: Current status and future directions

scientific article published on 17 December 2020

Obscured phylogeny and possible recombinational dormancy in Escherichia coli

scientific article

Parental management of childhood diarrhea

scientific article published on 20 November 2008

Patterned progression of bacterial populations in the premature infant gut.

scientific article

Pediatric fecal microbiota harbor diverse and novel antibiotic resistance genes

scientific article published in 2013

Performance of Stool-testing Recommendations for Acute Gastroenteritis When Used to Identify Children With 9 Potential Bacterial Enteropathogens

scientific article published on 01 September 2019

Performance of commercial tests for molecular detection of Shiga toxin-producing (STEC): a systematic review and meta-analysis protocol

scientific article published on 07 March 2019

Persistent metagenomic signatures of early-life hospitalization and antibiotic treatment in the infant gut microbiota and resistome

scientific article published on 09 September 2019

Phenotypic and genotypic analysis of Clostridium difficile isolates: a single-center study

scientific article

Phenotypic and molecular analysis of tellurite resistance among enterohemorrhagic Escherichia coli O157:H7 and sorbitol-fermenting O157:NM clinical isolates

scientific article

Pigment Visibility on Rectal Swabs Used To Detect Enteropathogens: a Prospective Cohort Study

scientific article published on 24 May 2019

Platelet-activating factor and Escherichia coliO157:H7 infections

scientific article

Practice guidelines for the management of infectious diarrhea

scientific article

Precise dissection of an Escherichia coli O157:H7 outbreak by single nucleotide polymorphism analysis

scientific article

Predicting Adverse Outcomes for Shiga Toxin-Producing E. coli Infections in Emergency Departments

scientific article published on 05 January 2021

Predicting Hemolytic Uremic Syndrome and Renal Replacement Therapy in Shiga Toxin-producing Escherichia coli-infected Children

scientific article published on 01 April 2020

Prevalence and Mechanisms of Broad-Spectrum β-Lactam Resistance in Enterobacteriaceae: a Children's Hospital Experience.

scientific article published in January 2009

Prevalence and mechanisms of broad-spectrum beta-lactam resistance in Enterobacteriaceae: a children's hospital experience

scientific article published on 02 September 2008

Proceedings of the 2016 Childhood Arthritis and Rheumatology Research Alliance (CARRA) Scientific Meeting : Toronto, Canada. 14-17 April 2016

article

Proinflammatory fecal mRNA and childhood bacterial enteric infections ⬇️

scientific article published on July 13, 2010

Proteomics-based expression library screening (PELS): a novel method for rapidly defining microbial immunoproteomes

scientific article

Prothrombotic coagulation abnormalities preceding the hemolytic-uremic syndrome

scientific article

Randomised controlled trial of Lactobacillus rhamnosus (LGG) versus placebo in children presenting to the emergency department with acute gastroenteritis: the PECARN probiotic study protocol

scientific article published on 24 September 2017

Re: Fruit Juice and Child Health

scientific article published on 01 October 2017

Real-Time PCR Assay for Detection and Differentiation of Shiga Toxin-Producing Escherichia coli from Clinical Samples

scientific article published on 29 April 2015

Rebuttal to: von Willebrand factor-cleaving protease in childhood diarrhoea-associated haemolytic uraemic syndrome.

scientific article

Reducing stunting among children: the potential contribution of diagnostics

scientific article published in November 2006

Relationship Between Enteropathogen and Acute Gastroenteritis Disease Severity: A Prospective Cohort Study

scientific article published on 4 October 2017

Relative nephroprotection during Escherichia coli O157:H7 infections: association with intravenous volume expansion

scientific article

Risk factors for the hemolytic uremic syndrome in children infected with Escherichia coli O157:H7: a multivariable analysis

scientific article

Risk of hemolytic uremic syndrome from antibiotic treatment of Escherichia coli O157:H7 colitis

Sepsis from the gut: the enteric habitat of bacteria that cause late-onset neonatal bloodstream infections

scientific article

Serologic Evidence of Gut-driven Systemic Inflammation in Juvenile Idiopathic Arthritis

scientific article

Shiga Toxin-Producing Escherichia coli Infection, Antibiotics, and Risk of Developing Hemolytic Uremic Syndrome: A Meta-analysis

scientific article published on 24 February 2016

Shiga Toxin/Verocytotoxin-Producing Escherichia coli Infections: Practical Clinical Perspectives

scientific article published on August 2014

Shiga toxin 1 interaction with enterocytes causes apical protein mistargeting through the depletion of intracellular galectin-3.

scientific article

Shiga toxin antigen detection should not replace sorbitol MacConkey agar screening of stool specimens

scientific article published on September 2004

Shiga toxin gene loss and transfer in vitro and in vivo during enterohemorrhagic Escherichia coli O26 infection in humans

scientific article published on 30 March 2007

Shiga toxin-associated hemolytic uremic syndrome and thrombotic thrombocytopenic purpura: distinct mechanisms of pathogenesis

scientific article

Shiga toxin-induced thrombotic microangiopathy: a thrombin-dependent process?

scientific article published in August 2004

Shiga toxin-producing Escherichia coli in Montana: bacterial genotypes and clinical profiles

scientific article

Shiga toxin-producing Escherichia coli in children with diarrhea: a prospective point-of-care study

scientific article published in August 2002

Shiga toxin-producing Escherichia coli: a single-center, 11-year pediatric experience.

scientific article

Shiga-toxin producing Escherichia coli and the hemolytic uremic syndrome: what have we learned in the past 25 years?

scientific article

Shiga-toxin-producing Escherichia coli and haemolytic uraemic syndrome

scientific article

Should all adult patients with diarrhoea-associated HUS receive plasma exchange?

scientific article published in The Lancet

Single multiplex polymerase chain reaction to detect diverse loci associated with diarrheagenic Escherichia coli

scientific article

StcE, a metalloprotease secreted by Escherichia coli O157:H7, specifically cleaves C1 esterase inhibitor.

scientific article

Strength of the association between antibiotic use and hemolytic uremic syndrome following Escherichia coli O157:H7 infection varies with case definition

scientific article published on 26 June 2018

Synchronization of mothers and offspring promotes tolerance and limits allergy

scientific article published on 06 August 2020

The CXCR4/CXCR7/SDF-1 pathway contributes to the pathogenesis of Shiga toxin-associated hemolytic uremic syndrome in humans and mice

scientific article

The Escherichia coli ycbQRST operon encodes fimbriae with laminin-binding and epithelial cell adherence properties in Shiga-toxigenic E.  coli O157:H7.

scientific article

The IrgA homologue adhesin Iha is an Escherichia coli virulence factor in murine urinary tract infection

scientific article

The Neonatal Microbiome and Necrotizing Enterocolitis

article

The Probiotic Conundrum: Regulatory Confusion, Conflicting Studies, and Safety Concerns

scientific article published on 01 March 2020

The effect of dietary resistant starch type 2 on the microbiota and markers of gut inflammation in rural Malawi children.

scientific article published on 3 September 2015

The effect of legume supplementation on the gut microbiota in rural Malawian infants aged 6 to 12 months

scientific article published on 11 February 2020

The late 1970s: a lull in the action on kuru

scientific article

The progression of serum cystatin C concentrations within the first month of life after preterm birth-a worldwide systematic review

scientific article published on 05 August 2020

Therapy: Azithromycin and decolonization after HUS.

scientific article

Transdermal fluorescence detection of a dual fluorophore system for noninvasive point-of-care gastrointestinal permeability measurement

scientific article published on 13 September 2019

Treatment of Shiga toxin-producing Escherichia coli infections

scientific article

Tri-county comprehensive assessment of risk factors for sporadic reportable bacterial enteric infection in children

scientific article published on February 2009

Undifferentiated Abdominal Pain in Children Presenting to the Pediatric Emergency Department

scientific article published on 06 August 2019

Unexplained benefits of antibiotics in childhood: empiricism in need of enlightenment

scientific article published on 20 March 2014

Use and accuracy of diagnostic imaging by hospital type in pediatric appendicitis.

scientific article

Use of in vivo-induced antigen technology for identification of Escherichia coli O157:H7 proteins expressed during human infection

scientific article published in May 2005

Using antibiotics in suspected haemolytic-uraemic syndrome: antibiotics should not be used in Escherichia coli O157:H7 infection

scientific article published in May 2005

Validation of the modified Vesikari score in children with gastroenteritis in 5 US emergency departments

scientific article published on October 2013

Verotoxigenic Escherichia coli Infection: U.S. Overview †

scientific article published on 01 November 1997

Viral co-infections are common and are associated with higher bacterial burden in children with clostridium difficile infection

scientific article

Whole Genome Sequencing for Genomics-Guided Investigations of Escherichia coli O157:H7 Outbreaks

scientific article published on 30 June 2016

Whole-Genome Draft Sequences of 26 Enterohemorrhagic Escherichia coli O157:H7 Strains

scientific article published on 28 February 2013

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