List of works - Catherine Mooney

Ab initio and homology based prediction of protein domains by recursive neural networks

scientific article published on 26 June 2009

Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks

scientific article

Accurate prediction of protein secondary structure and solvent accessibility by consensus combiners of sequence and structure information

scientific article

Alpha-1 antitrypsin augmentation therapy decreases miR-199a-5p, miR-598 and miR-320a expression in monocytes via inhibition of NFκB.

scientific article published on 23 October 2017

Application of Artificial Intelligence Techniques to Predict Risk of Recurrence of Breast Cancer: A Systematic Review

scientific article published in 2022

Beyond the Twilight Zone: automated prediction of structural properties of proteins by recursive neural networks and remote homology information.

scientific article

C19orf12 mutation leads to a pallido-pyramidal syndrome.

scientific article published on 17 December 2013

CPPpred: prediction of cell penetrating peptides

scientific article

Cerebrospinal fluid microRNAs are potential biomarkers of temporal lobe epilepsy and status epilepticus

scientific article

Clinical Decision Support Systems in Breast Cancer: A Systematic Review

scientific article published on 06 February 2020

De-repression of myelin-regulating gene expression after status epilepticus in mice lacking the C/EBP homologous protein CHOP

scientific article

Design and evaluation of antimalarial peptides derived from prediction of short linear motifs in proteins related to erythrocyte invasion

scientific article published on 3 June 2015

Distill: a suite of web servers for the prediction of one-, two- and three-dimensional structural features of proteins.

scientific article published on 5 September 2006

Effective compiler error message enhancement for novice programming students

Eosinophil peroxidase activates cells by HER2 receptor engagement and β1-integrin clustering with downstream MAPK cell signaling

scientific article published on 9 August 2016

EpimiRBase: a comprehensive database of microRNA-epilepsy associations

scientific article published on 8 January 2016

Evaluating the Sense of Belonging of Undergraduate Computing Students in the UK and Ireland

scientific article published on 25 September 2023

High Throughput qPCR Expression Profiling of Circulating MicroRNAs Reveals Minimal Sex- and Sample Timing-Related Variation in Plasma of Healthy Volunteers.

scientific article published on 23 December 2015

In silico approaches to predict the potential of milk protein-derived peptides as dipeptidyl peptidase IV (DPP-IV) inhibitors.

scientific article

Investigating the Impact of the COVID-19 Pandemic on Computing Students' Sense of Belonging

scientific article

Marked variability in the extent of protein disorder within and between viral families

scientific article

Multi-Gene Prognostic Signatures and Prediction of Pathological Complete Response to Neoadjuvant Chemotherapy in ER-positive, HER2-negative Breast Cancer Patients

scientific article published on 01 May 2020

Mutations in γ adducin are associated with inherited cerebral palsy.

scientific article published on December 2013

Pathways to Belonging: Understanding How University Entry Routes Shape the Sense of Belonging of Undergraduate Computing Students

scientific article published on 23 September 2024

PeptideLocator: prediction of bioactive peptides in protein sequences ⬇️

scientific article published on March 16, 2013

Predicting binding within disordered protein regions to structurally characterised peptide-binding domains

scientific article

Prediction of caregiver burden in amyotrophic lateral sclerosis: a machine learning approach using random forests applied to a cohort study

scientific article published on 28 February 2020

Prediction of short linear protein binding regions

scientific article

RNA sequencing of synaptic and cytoplasmic Upf1-bound transcripts supports contribution of nonsense-mediated decay to epileptogenesis.

scientific article

RNA-sequencing analysis of umbilical cord plasma microRNAs from healthy newborns

scientific article published in PLoS ONE

SCL-Epred: a generalised de novo eukaryotic protein subcellular localisation predictor

scientific article published on 9 April 2013

SCLpred: protein subcellular localization prediction by N-to-1 neural networks

scientific article (publication date: 15 October 2011)

Sense of Belonging of Undergraduate Computing Students: A Comparative Analysis of University Entry Routes

scientific article published on 25 September 2023

Student Sense of Belonging: The Role of Gender Identity and Minoritisation in Computing and Other Sciences

scientific article published on 19 January 2023

Systemic delivery of antagomirs during blood-brain barrier disruption is disease-modifying in experimental epilepsy

scientific article published on 18 February 2021

Towards the improved discovery and design of functional peptides: common features of diverse classes permit generalized prediction of bioactivity

scientific article

Understanding a post-COVID Drop in the Belongingness of Minoritised Men in an Undergraduate Computer Science Course

scientific article published on 21 November 2023

microRNA targeting of the P2X7 purinoceptor opposes a contralateral epileptogenic focus in the hippocampus

scientific article

List of works by Catherine Mooney

Ab initio and homology based prediction of protein domains by recursive neural networks

Ab initio and template-based prediction of multi-class distance maps by two-dimensional recursive neural networks

Accurate prediction of protein secondary structure and solvent accessibility by consensus combiners of sequence and structure information

Alpha-1 antitrypsin augmentation therapy decreases miR-199a-5p, miR-598 and miR-320a expression in monocytes via inhibition of NFκB.

Application of Artificial Intelligence Techniques to Predict Risk of Recurrence of Breast Cancer: A Systematic Review

Beyond the Twilight Zone: automated prediction of structural properties of proteins by recursive neural networks and remote homology information.

C19orf12 mutation leads to a pallido-pyramidal syndrome.

CPPpred: prediction of cell penetrating peptides

Cerebrospinal fluid microRNAs are potential biomarkers of temporal lobe epilepsy and status epilepticus

Clinical Decision Support Systems in Breast Cancer: A Systematic Review

De-repression of myelin-regulating gene expression after status epilepticus in mice lacking the C/EBP homologous protein CHOP

Design and evaluation of antimalarial peptides derived from prediction of short linear motifs in proteins related to erythrocyte invasion

Distill: a suite of web servers for the prediction of one-, two- and three-dimensional structural features of proteins.

Effective compiler error message enhancement for novice programming students

Eosinophil peroxidase activates cells by HER2 receptor engagement and β1-integrin clustering with downstream MAPK cell signaling

EpimiRBase: a comprehensive database of microRNA-epilepsy associations

Evaluating the Sense of Belonging of Undergraduate Computing Students in the UK and Ireland

High Throughput qPCR Expression Profiling of Circulating MicroRNAs Reveals Minimal Sex- and Sample Timing-Related Variation in Plasma of Healthy Volunteers.

In silico approaches to predict the potential of milk protein-derived peptides as dipeptidyl peptidase IV (DPP-IV) inhibitors.

Investigating the Impact of the COVID-19 Pandemic on Computing Students' Sense of Belonging

Marked variability in the extent of protein disorder within and between viral families

Multi-Gene Prognostic Signatures and Prediction of Pathological Complete Response to Neoadjuvant Chemotherapy in ER-positive, HER2-negative Breast Cancer Patients

Mutations in γ adducin are associated with inherited cerebral palsy.

Pathways to Belonging: Understanding How University Entry Routes Shape the Sense of Belonging of Undergraduate Computing Students

PeptideLocator: prediction of bioactive peptides in protein sequences ⬇️

Predicting binding within disordered protein regions to structurally characterised peptide-binding domains

Prediction of caregiver burden in amyotrophic lateral sclerosis: a machine learning approach using random forests applied to a cohort study

Prediction of short linear protein binding regions

RNA sequencing of synaptic and cytoplasmic Upf1-bound transcripts supports contribution of nonsense-mediated decay to epileptogenesis.

RNA-sequencing analysis of umbilical cord plasma microRNAs from healthy newborns

SCL-Epred: a generalised de novo eukaryotic protein subcellular localisation predictor

SCLpred: protein subcellular localization prediction by N-to-1 neural networks

Sense of Belonging of Undergraduate Computing Students: A Comparative Analysis of University Entry Routes

Student Sense of Belonging: The Role of Gender Identity and Minoritisation in Computing and Other Sciences

Systemic delivery of antagomirs during blood-brain barrier disruption is disease-modifying in experimental epilepsy

Towards the improved discovery and design of functional peptides: common features of diverse classes permit generalized prediction of bioactivity

Understanding a post-COVID Drop in the Belongingness of Minoritised Men in an Undergraduate Computer Science Course

microRNA targeting of the P2X7 purinoceptor opposes a contralateral epileptogenic focus in the hippocampus